MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 51020 bp
Accession: NZ_AP018394 Location: 1..51020 Organism: Lacticaseibacillus paracasei strain IJH-SONE68 Replicon: plasmid pLPS-2
Accession: NZ_AP018394 Location: 1..51020 Organism: Lacticaseibacillus paracasei strain IJH-SONE68 Replicon: plasmid pLPS-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL355_RS16185 () | 1..437 | + | 437 | Protein_0 | extracellular solute-binding protein | - |
| EL355_RS16190 () | 461..1847 | + | 1387 | Protein_1 | sugar ABC transporter permease | - |
| EL355_RS16195 () | 1850..2707 | + | 858 | WP_003569650.1 | sugar ABC transporter permease | - |
| EL355_RS16200 () | 2891..3847 | + | 957 | WP_003569652.1 | LacI family transcriptional regulator | - |
| EL355_RS16205 () | 3906..4037 | - | 132 | Protein_4 | helix-turn-helix domain-containing protein | - |
| EL355_RS16210 () | 4429..4713 | - | 285 | WP_016383626.1 | BRCT domain-containing protein | - |
| EL355_RS16215 () | 4719..5369 | - | 651 | WP_003586220.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| EL355_RS16220 () | 5506..5787 | - | 282 | WP_126353757.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| EL355_RS16225 () | 5780..6022 | - | 243 | WP_016369696.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| EL355_RS16230 () | 6328..6607 | + | 280 | Protein_9 | HTH domain-containing protein | - |
| EL355_RS16240 () | 6992..7882 | + | 891 | WP_126353758.1 | IS30 family transposase ISLpl1 | Transposase |
| EL355_RS16245 () | 7935..9097 | + | 1163 | WP_126353759.1 | IS3 family transposase ISL1 | Transposase |
| EL355_RS16255 () | 9175..9516 | + | 342 | Protein_12 | IS5 family transposase ISCaa8 | Transposase |
| EL355_RS16260 () | 9554..10330 | + | 777 | Protein_13 | aldo/keto reductase | - |
| EL355_RS16270 () | 10378..11061 | + | 684 | WP_126353760.1 | IS6 family transposase ISBth20 | Transposase |
| EL355_RS16275 () | 11127..12953 | - | 1827 | WP_126353761.1 | cadmium-translocating P-type ATPase | - |
| EL355_RS16280 () | 13325..13594 | - | 270 | Protein_16 | PTS sugar transporter subunit IIC | - |
| EL355_RS16285 () | 13658..14344 | - | 687 | WP_126353762.1 | IS6 family transposase ISLgar4 | Transposase |
| EL355_RS16290 () | 14587..15603 | + | 1017 | WP_126352935.1 | IS30 family transposase ISSag3 | Transposase |
| EL355_RS16295 () | 15751..17232 | - | 1482 | WP_071253019.1 | primase C-terminal domain-containing protein | - |
| EL355_RS16300 () | 17777..18592 | + | 816 | WP_016368704.1 | AAA family ATPase | - |
| EL355_RS16305 () | 18594..18938 | + | 345 | WP_016383917.1 | hypothetical protein | - |
| EL355_RS16310 () | 19115..19459 | + | 345 | WP_071253020.1 | hypothetical protein | - |
| EL355_RS16315 () | 19410..19709 | + | 300 | WP_016368707.1 | hypothetical protein | - |
| EL355_RS16320 () | 19775..20461 | - | 687 | Protein_24 | IS6 family transposase ISSau6 | Transposase |
| EL355_RS16325 () | 20550..21560 | + | 1011 | WP_126353763.1 | Peptidoglycan endopeptidase RipA | VF |
| EL355_RS16330 () | 21576..22220 | + | 645 | WP_126353764.1 | hypothetical protein | - |
| EL355_RS16335 () | 22217..22624 | + | 408 | WP_003605677.1 | thioredoxin family protein | - |
| EL355_RS16340 () | 22614..23435 | + | 822 | WP_126353765.1 | hypothetical protein | - |
| EL355_RS16350 () | 24029..24229 | + | 201 | WP_016385207.1 | hypothetical protein | - |
| EL355_RS16355 () | 24226..24483 | + | 258 | WP_096772783.1 | hypothetical protein | - |
| EL355_RS16360 () | 24522..24959 | + | 438 | WP_126353766.1 | hypothetical protein | - |
| EL355_RS16365 () | 24952..25203 | + | 252 | Protein_32 | hypothetical protein | Relaxase |
| EL355_RS16375 () | 25390..26253 | - | 864 | WP_126353767.1 | IS3 family transposase IS1520 | Transposase |
| EL355_RS16380 () | 26322..27050 | + | 729 | WP_126353768.1 | IS3 family transposase ISSth1b | Transposase |
| EL355_RS16385 () | 27026..27925 | + | 900 | Protein_35 | IS3 family transposase ISSth1b | Transposase |
| EL355_RS16390 () | 27935..28264 | - | 330 | WP_074392996.1 | IS3 family transposase IS1163 | Transposase |
| EL355_RS16395 () | 28502..30169 | + | 1668 | WP_016383623.1 | alpha-glucosidase | - |
| EL355_RS16400 () | 30172..31911 | + | 1740 | WP_003569637.1 | glycoside hydrolase family 13 protein | - |
| EL355_RS16405 () | 32030..34288 | + | 2259 | WP_126353770.1 | glycoside hydrolase family 65 protein | - |
| EL355_RS16410 () | 34281..34961 | + | 681 | WP_003569641.1 | beta-phosphoglucomutase | - |
| EL355_RS16415 () | 34954..36081 | + | 1128 | WP_003569644.1 | Trehalose import ATP-binding protein SugC | VF |
| EL355_RS16420 () | 36094..37701 | + | 1608 | WP_016383624.1 | alpha-glucosidase | - |
| EL355_RS16425 () | 37793..39025 | + | 1233 | WP_003569646.1 | extracellular solute-binding protein | - |
| EL355_RS16430 () | 39079..40437 | + | 1359 | WP_003569648.1 | sugar ABC transporter permease | - |
| EL355_RS16435 () | 40440..41297 | + | 858 | WP_003569650.1 | sugar ABC transporter permease | - |
| EL355_RS16440 () | 41481..42437 | + | 957 | WP_003569652.1 | LacI family transcriptional regulator | - |
| EL355_RS16445 () | 42496..42627 | - | 132 | Protein_47 | helix-turn-helix domain-containing protein | - |
| EL355_RS16450 () | 43019..43303 | - | 285 | WP_016383626.1 | BRCT domain-containing protein | - |
| EL355_RS16455 () | 43309..43959 | - | 651 | WP_003586220.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| EL355_RS16460 () | 44096..44377 | - | 282 | WP_126353757.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| EL355_RS16465 () | 44370..44612 | - | 243 | WP_016369696.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| EL355_RS16470 () | 44918..45197 | + | 280 | Protein_52 | HTH domain-containing protein | - |
| EL355_RS16485 () | 45582..46471 | + | 890 | Protein_53 | IS30 family transposase | - |
| EL355_RS16490 () | 46524..47684 | + | 1161 | Protein_54 | IS3 family transposase ISL1 | Transposase |
| EL355_RS16500 () | 47762..48102 | + | 341 | Protein_55 | transposase | - |
| EL355_RS16505 () | 48140..48916 | + | 777 | Protein_56 | aldo/keto reductase | - |
| EL355_RS16515 () | 48968..49644 | + | 677 | WP_191989394.1 | IS6 family transposase | - |
| EL355_RS16520 () | 49710..51020 | - | 1311 | Protein_58 | cadmium-translocating P-type ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|