MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 115970 bp
Accession: NZ_AP018338 Location: 662732..778701 Organism: Streptococcus oralis subsp. tigurinus strain osk_001 Replicon: chromosome
Accession: NZ_AP018338 Location: 662732..778701 Organism: Streptococcus oralis subsp. tigurinus strain osk_001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STO1_RS03340 () | 658000..658752 | + | 753 | WP_007520290.1 | YhfC family intramembrane metalloprotease | - |
| STO1_RS03345 () | 658862..659767 | + | 906 | WP_007520288.1 | UDP-N-acetylmuramate dehydrogenase | - |
| STO1_RS03350 () | 659926..661083 | + | 1158 | WP_000742901.1 | ABC transporter ATP-binding protein | - |
| STO1_RS03355 () | 661064..661870 | + | 807 | WP_000754120.1 | ABC transporter permease | - |
| STO1_RS03360 () | 661867..662640 | + | 774 | WP_096421959.1 | ABC transporter permease | - |
| STO1_RS03365 () | 662637..663707 | + | 1071 | WP_061588285.1 | ABC transporter substrate-binding protein | - |
| STO1_RS03370 () | 663966..664451 | + | 486 | WP_096421961.1 | LURP-one-related family protein | - |
| STO1_RS03375 () | 664473..667091 | + | 2619 | WP_096421963.1 | alanine--tRNA ligase | - |
| STO1_RS03380 () | 667179..668627 | - | 1449 | WP_096421965.1 | alpha-amylase | - |
| STO1_RS03385 () | 668899..670062 | + | 1164 | WP_172843640.1 | class I SAM-dependent rRNA methyltransferase | - |
| STO1_RS03390 () | 670059..670736 | + | 678 | WP_084918169.1 | type I 3-dehydroquinate dehydratase | - |
| STO1_RS03395 () | 670726..671580 | + | 855 | WP_096421967.1 | shikimate dehydrogenase | - |
| STO1_RS03400 () | 671599..672666 | + | 1068 | WP_084918173.1 | 3-dehydroquinate synthase | - |
| STO1_RS03405 () | 672676..673842 | + | 1167 | WP_096421969.1 | chorismate synthase | - |
| STO1_RS03410 () | 673852..674955 | + | 1104 | WP_096421971.1 | prephenate dehydrogenase | - |
| STO1_RS03415 () | 674966..675304 | + | 339 | WP_096421973.1 | YlbF/YmcA family competence regulator | - |
| STO1_RS03420 () | 675395..676678 | + | 1284 | WP_096421975.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| STO1_RS03425 () | 676671..677147 | + | 477 | WP_096421977.1 | shikimate kinase | - |
| STO1_RS03430 () | 677144..677992 | + | 849 | WP_061588277.1 | prephenate dehydratase | - |
| STO1_RS03435 () | 677989..679284 | + | 1296 | WP_045617372.1 | LCP family protein | - |
| STO1_RS03440 () | 679430..680266 | + | 837 | WP_007520258.1 | phosphorylcholine transferase LicD | - |
| STO1_RS03445 () | 680263..681231 | + | 969 | WP_096421979.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| STO1_RS03450 () | 681253..683412 | + | 2160 | WP_096421981.1 | hypothetical protein | VF |
| STO1_RS03455 () | 683470..684282 | + | 813 | WP_084920604.1 | hypothetical protein | VF |
| STO1_RS03460 () | 684326..686851 | + | 2526 | WP_096421983.1 | hypothetical protein | VF |
| STO1_RS03465 () | 686898..688376 | - | 1479 | WP_000789711.1 | oligosaccharide flippase family protein | - |
| STO1_RS03470 () | 688499..689239 | + | 741 | WP_084881745.1 | adaptor protein MecA | - |
| STO1_RS03475 () | 689387..690673 | + | 1287 | WP_096421985.1 | homoserine dehydrogenase | - |
| STO1_RS03480 () | 690675..691544 | + | 870 | WP_096421987.1 | homoserine kinase | - |
| STO1_RS03485 () | 691644..692582 | + | 939 | WP_070534598.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| STO1_RS03490 () | 692794..694518 | + | 1725 | WP_096421989.1 | ABC transporter ATP-binding protein/permease | - |
| STO1_RS03495 () | 694520..696268 | + | 1749 | WP_096421991.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| STO1_RS03500 () | 696375..697634 | + | 1260 | WP_096421993.1 | TRZ/ATZ family protein | - |
| STO1_RS03510 () | 697870..698370 | + | 501 | WP_045617357.1 | 50S ribosomal protein L10 | - |
| STO1_RS03515 () | 698446..698814 | + | 369 | WP_096421995.1 | 50S ribosomal protein L7/L12 | - |
| STO1_RS03520 () | 699016..699189 | + | 174 | WP_000159606.1 | hypothetical protein | - |
| STO1_RS03525 () | 699186..699965 | + | 780 | WP_000822774.1 | replication initiator protein A | - |
| STO1_RS03530 () | 700064..701419 | + | 1356 | WP_000668587.1 | DNA (cytosine-5-)-methyltransferase | - |
| STO1_RS03535 () | 701403..701852 | + | 450 | WP_000645892.1 | hypothetical protein | - |
| STO1_RS03540 () | 701845..702225 | + | 381 | WP_000566534.1 | arsenate reductase family protein | - |
| STO1_RS03545 () | 702238..702471 | + | 234 | WP_000840776.1 | hypothetical protein | - |
| STO1_RS03550 () | 702474..703061 | + | 588 | WP_000821303.1 | CPBP family intramembrane metalloprotease | - |
| STO1_RS03555 () | 703238..704455 | - | 1218 | WP_001291561.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| STO1_RS03560 () | 704537..704740 | - | 204 | WP_000814511.1 | excisionase | - |
| STO1_RS03570 () | 705201..705431 | - | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| STO1_RS03575 () | 705428..705850 | - | 423 | WP_016399599.1 | sigma-70 family RNA polymerase sigma factor | - |
| STO1_RS03580 () | 706354..706707 | + | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| STO1_RS03585 () | 706767..706958 | - | 192 | WP_001860868.1 | cysteine-rich KTR domain-containing protein | - |
| STO1_RS03590 () | 707480..707650 | + | 171 | WP_000873143.1 | hypothetical protein | - |
| STO1_RS03595 () | 708036..709253 | + | 1218 | WP_000417519.1 | Enterobactin exporter EntS | ARG |
| STO1_RS03600 () | 709373..710836 | + | 1464 | WP_000420313.1 | Vitamin B12 import ATP-binding protein BtuD | ARG |
| STO1_RS03605 () | 710954..711253 | - | 300 | WP_001072467.1 | hypothetical protein | - |
| STO1_RS03610 () | 711240..711608 | - | 369 | WP_000567222.1 | hypothetical protein | - |
| STO1_RS03615 () | 711621..711956 | - | 336 | WP_000806926.1 | hypothetical protein | - |
| STO1_RS03620 () | 711953..712198 | - | 246 | WP_001813542.1 | hypothetical protein | - |
| STO1_RS03630 () | 712562..714481 | - | 1920 | WP_096421997.1 | Peptide chain release factor 3 | VF |
| STO1_RS03635 () | 714497..714613 | - | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| STO1_RS03640 () | 714858..715793 | - | 936 | WP_001224320.1 | conjugal transfer protein | - |
| STO1_RS03645 () | 715790..716791 | - | 1002 | WP_000769867.1 | hypothetical protein | VF |
| STO1_RS03650 () | 716788..718965 | - | 2178 | WP_006146375.1 | membrane protein | - |
| STO1_RS03655 () | 718968..721415 | - | 2448 | WP_070527126.1 | ATP-binding protein | - |
| STO1_RS03660 () | 721399..721905 | - | 507 | WP_000506270.1 | conjugal transfer protein | - |
| STO1_RS03665 () | 721880..722377 | - | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| STO1_RS03670 () | 722494..722715 | - | 222 | WP_001009056.1 | hypothetical protein | - |
| STO1_RS03675 () | 722758..723962 | - | 1205 | Protein_711 | replication initiation factor domain-containing protein | - |
| STO1_RS03680 () | 723985..724137 | - | 153 | WP_000879507.1 | hypothetical protein | - |
| STO1_RS03685 () | 724140..725525 | - | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| STO1_RS03690 () | 725554..725940 | - | 387 | WP_000985015.1 | YdcP family protein | - |
| STO1_RS03695 () | 725956..726270 | - | 315 | WP_000420682.1 | YdcP family protein | - |
| STO1_RS03705 () | 726945..727244 | + | 300 | WP_000869753.1 | hypothetical protein | - |
| STO1_RS03710 () | 727234..727722 | + | 489 | WP_000093687.1 | hypothetical protein | - |
| STO1_RS03715 () | 727722..729599 | + | 1878 | WP_025170820.1 | type IV secretory system conjugative DNA transfer family protein | - |
| STO1_RS03720 () | 729620..729862 | + | 243 | WP_000627865.1 | hypothetical protein | - |
| STO1_RS03725 () | 729879..730733 | + | 855 | WP_096421999.1 | conjugal transfer protein TrbL | - |
| STO1_RS03730 () | 730787..731146 | + | 360 | WP_096422001.1 | PrgI family protein | - |
| STO1_RS03735 () | 731097..733454 | + | 2358 | WP_096422003.1 | AAA family ATPase | - |
| STO1_RS03740 () | 733466..736279 | + | 2814 | WP_096422005.1 | CHAP domain-containing protein | - |
| STO1_RS09755 () | 736310..736498 | - | 189 | WP_071788347.1 | hypothetical protein | - |
| STO1_RS03750 () | 736517..737083 | + | 567 | WP_000013901.1 | hypothetical protein | - |
| STO1_RS03755 () | 737234..737644 | + | 411 | WP_000387505.1 | thrombospondin type 3 repeat-containing protein | - |
| STO1_RS03760 () | 737677..743904 | + | 6228 | WP_096422007.1 | DEAD/DEAH box helicase family protein | - |
| STO1_RS03765 () | 743979..744263 | + | 285 | WP_096422009.1 | hypothetical protein | - |
| STO1_RS03770 () | 744277..744573 | + | 297 | WP_096422011.1 | hypothetical protein | - |
| STO1_RS03775 () | 744587..744784 | - | 198 | WP_096422013.1 | hypothetical protein | - |
| STO1_RS03780 () | 744944..745585 | + | 642 | WP_096422015.1 | peptidylprolyl isomerase | - |
| STO1_RS03785 () | 745595..746680 | + | 1086 | WP_000510561.1 | toprim domain-containing protein | - |
| STO1_RS03790 () | 746731..746964 | + | 234 | WP_000152419.1 | hypothetical protein | - |
| STO1_RS03795 () | 746961..747344 | + | 384 | WP_096422017.1 | chemotaxis protein | - |
| STO1_RS03800 () | 747382..747654 | + | 273 | WP_045773570.1 | hypothetical protein | - |
| STO1_RS03805 () | 747725..748201 | + | 477 | WP_045773571.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| STO1_RS03810 () | 748201..748971 | + | 771 | WP_045773572.1 | zeta toxin family protein | Toxin Detail |
| STO1_RS03815 () | 749226..749909 | + | 684 | WP_045773573.1 | LexA family transcriptional regulator | - |
| STO1_RS03820 () | 749912..751327 | + | 1416 | WP_045773574.1 | Y-family DNA polymerase | - |
| STO1_RS03825 () | 751324..751689 | + | 366 | WP_045773575.1 | hypothetical protein | - |
| STO1_RS03830 () | 751679..751969 | + | 291 | WP_001080186.1 | hypothetical protein | - |
| STO1_RS03835 () | 752261..752617 | + | 357 | WP_001115082.1 | hypothetical protein | - |
| STO1_RS03840 () | 752622..752987 | + | 366 | WP_037612713.1 | MobC family plasmid mobilization relaxosome protein | - |
| STO1_RS03845 () | 752974..754797 | + | 1824 | WP_037612711.1 | relaxase/mobilization nuclease domain-containing protein | - |
| STO1_RS03850 () | 754912..755778 | + | 867 | WP_037612709.1 | helix-turn-helix transcriptional regulator | - |
| STO1_RS03855 () | 756115..757151 | + | 1037 | Protein_746 | hypothetical protein | - |
| STO1_RS03860 () | 757329..758231 | + | 903 | WP_051415232.1 | shikimate dehydrogenase | - |
| STO1_RS03865 () | 758200..759036 | + | 837 | WP_041331783.1 | sugar phosphate isomerase/epimerase | - |
| STO1_RS03870 () | 759038..759781 | + | 744 | WP_037612706.1 | coenzyme F420-0:L-glutamate ligase | - |
| STO1_RS03875 () | 759765..760751 | + | 987 | WP_096422019.1 | dehydrogenase | - |
| STO1_RS03880 () | 760763..761962 | + | 1200 | WP_041331786.1 | methionine adenosyltransferase | - |
| STO1_RS03885 () | 761946..762923 | + | 978 | WP_037612947.1 | serine/threonine protein kinase | - |
| STO1_RS03890 () | 762966..763973 | + | 1008 | WP_037612949.1 | glycosyltransferase | - |
| STO1_RS03895 () | 764282..767266 | + | 2985 | WP_037612950.1 | non-ribosomal peptide synthetase | - |
| STO1_RS03900 () | 767290..768447 | + | 1158 | WP_037612952.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| STO1_RS03905 () | 768536..769744 | + | 1209 | WP_037612953.1 | MFS transporter | - |
| STO1_RS03910 () | 770410..770631 | + | 222 | WP_016397755.1 | helix-turn-helix domain-containing protein | - |
| STO1_RS03920 () | 770939..771208 | + | 270 | WP_000450956.1 | DUF3173 family protein | - |
| STO1_RS03925 () | 771180..772367 | + | 1188 | WP_037612959.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| STO1_RS03930 () | 772844..773746 | + | 903 | WP_007522243.1 | DUF2268 domain-containing protein | - |
| STO1_RS03935 () | 773809..774177 | + | 369 | WP_045617978.1 | EXLDI protein | - |
| STO1_RS03940 () | 774391..775395 | + | 1005 | WP_084939781.1 | L-threonine 3-dehydrogenase | VF |
| STO1_RS03945 () | 775412..776056 | + | 645 | WP_096422021.1 | TetR/AcrR family transcriptional regulator | - |
| STO1_RS03950 () | 776153..777499 | - | 1347 | WP_061588269.1 | NADP-specific glutamate dehydrogenase | - |
| STO1_RS03955 () | 777704..778639 | + | 936 | WP_096422023.1 | dihydroorotate oxidase | - |
| STO1_RS03960 () | 778672..779706 | + | 1035 | WP_096422025.1 | DNA polymerase III subunit delta | - |
| STO1_RS03965 () | 779779..780384 | + | 606 | WP_000974728.1 | superoxide dismutase SodA | - |
| STO1_RS03970 () | 780540..781070 | + | 531 | WP_001224366.1 | YutD family protein | - |
| STO1_RS03975 () | 781091..782176 | + | 1086 | WP_061852432.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| STO1_RS03980 () | 782178..782657 | + | 480 | WP_096422027.1 | VanZ family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|