MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_AP018036 Location: 3794274..3799216 Organism: Mycobacterium tuberculosis strain HN-506 Replicon: chromosome
Accession: NZ_AP018036 Location: 3794274..3799216 Organism: Mycobacterium tuberculosis strain HN-506 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ04_RS18460 () | 3790109..3790999 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| CPZ04_RS18465 () | 3791008..3792846 | - | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| CPZ04_RS18470 () | 3792843..3793832 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CPZ04_RS18475 () | 3793832..3794221 | - | 390 | Protein_3488 | polyprenyl synthetase family protein | - |
| CPZ04_RS18480 () | 3794274..3795535 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CPZ04_RS18485 () | 3795577..3796242 | - | 666 | Protein_3490 | polyprenyl synthetase family protein | - |
| CPZ04_RS18490 () | 3796996..3797388 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CPZ04_RS18495 () | 3797388..3797663 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CPZ04_RS18500 () | 3797875..3799216 | + | 1342 | Protein_3493 | ISNCY family transposase ISRjo3 | Transposase |
| CPZ04_RS18505 () | 3799406..3801583 | + | 2178 | WP_016330440.1 | PE family protein | - |
| CPZ04_RS18510 () | 3801654..3802526 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| CPZ04_RS18515 () | 3802600..3803310 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |