MGE detailed information
MGE type: IScluster/Tn MGE length: 15216 bp
Accession: NZ_AP017658 Location: 37313..52528 Organism: Sphingobium cloacae strain JCM 10874 Replicon: plasmid pSCLO_4
Accession: NZ_AP017658 Location: 37313..52528 Organism: Sphingobium cloacae strain JCM 10874 Replicon: plasmid pSCLO_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCLO_RS21550 () | 33510..34376 | + | 867 | WP_006961816.1 | recombinase family protein | - |
| SCLO_RS21555 () | 34438..34632 | - | 195 | Protein_36 | replication initiation protein | - |
| SCLO_RS21560 () | 35636..35842 | + | 207 | Protein_37 | GrpB family protein | - |
| SCLO_RS21565 () | 35848..36549 | - | 702 | Protein_38 | type IV secretory system conjugative DNA transfer family protein | - |
| SCLO_RS21570 () | 36586..37146 | - | 561 | WP_011950653.1 | recombinase family protein | - |
| SCLO_RS21575 () | 37214..37978 | + | 765 | WP_066522521.1 | IS6 family transposase IS6100 | Transposase |
| SCLO_RS21580 () | 38167..39159 | - | 993 | WP_123905556.1 | serine/threonine protein phosphatase | - |
| SCLO_RS21585 () | 39455..40219 | + | 765 | WP_066522521.1 | IS6 family transposase IS6100 | Transposase |
| SCLO_RS21590 () | 40277..42709 | + | 2433 | Protein_43 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| SCLO_RS21595 () | 42706..42972 | - | 267 | WP_083949265.1 | XRE family transcriptional regulator | - |
| SCLO_RS21600 () | 43020..43313 | - | 294 | WP_066522399.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SCLO_RS21605 () | 43301..43579 | - | 279 | WP_066522401.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| SCLO_RS21610 () | 43744..46635 | - | 2892 | WP_016746447.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| SCLO_RS21615 () | 46761..47381 | + | 621 | WP_008832583.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| SCLO_RS21620 () | 47378..47908 | + | 531 | WP_007686150.1 | GNAT family N-acetyltransferase | - |
| SCLO_RS21625 () | 48158..48490 | - | 333 | Protein_50 | error-prone DNA polymerase | - |
| SCLO_RS23520 () | 48456..48899 | + | 444 | WP_061939936.1 | hypothetical protein | - |
| SCLO_RS21635 () | 49113..49526 | + | 414 | Protein_52 | hypothetical protein | - |
| SCLO_RS21640 () | 49700..49978 | + | 279 | WP_061939934.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SCLO_RS21645 () | 49989..50273 | + | 285 | WP_061939959.1 | HigA family addiction module antidote protein | - |
| SCLO_RS21650 () | 50585..51958 | - | 1374 | WP_061939932.1 | hypothetical protein | - |
| SCLO_RS21655 () | 51959..52528 | - | 570 | WP_061939957.1 | Tn3 family transposase TnpR_ISMex38 | Transposase |
| SCLO_RS21660 () | 52669..55638 | + | 2970 | WP_048575129.1 | Tn3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|