MGE detailed information
MGE type: Prophage MGE length: 42547 bp
Accession: NZ_AP017655 Location: 3125984..3168530 Organism: Sphingobium cloacae strain JCM 10874 Replicon: chromosome
Accession: NZ_AP017655 Location: 3125984..3168530 Organism: Sphingobium cloacae strain JCM 10874 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCLO_RS23595 () | 3121911..3124697 | + | 2787 | WP_066520300.1 | TonB-dependent receptor | - |
| SCLO_RS15245 () | 3124929..3125255 | + | 327 | WP_066520302.1 | antibiotic biosynthesis monooxygenase | - |
| SCLO_RS15250 () | 3125259..3125936 | - | 678 | WP_066520305.1 | spermidine synthase | - |
| SCLO_RS15255 () | 3126089..3126541 | + | 453 | WP_066520308.1 | hypothetical protein | - |
| SCLO_RS15260 () | 3126552..3127904 | - | 1353 | WP_066520311.1 | family 43 glycosylhydrolase | - |
| SCLO_RS15265 () | 3127976..3130732 | - | 2757 | WP_066520313.1 | TonB-dependent receptor | - |
| SCLO_RS15270 () | 3130864..3132312 | - | 1449 | WP_123905528.1 | glycoside hydrolase family 32 protein | - |
| SCLO_RS15275 () | 3132195..3132923 | - | 729 | WP_096362194.1 | IS21 family transposase ISSsp4 | Transposase |
| SCLO_RS15280 () | 3132910..3134424 | - | 1515 | WP_096362065.1 | IS21 family transposase ISSsp4 | Transposase |
| SCLO_RS15285 () | 3134761..3135768 | - | 1008 | WP_096362169.1 | late control protein | - |
| SCLO_RS15290 () | 3135765..3136175 | - | 411 | WP_066519771.1 | phage tail protein | - |
| SCLO_RS15295 () | 3136184..3136369 | - | 186 | WP_066519770.1 | hypothetical protein | - |
| SCLO_RS15300 () | 3136381..3138834 | - | 2454 | WP_066519767.1 | phage tail tape measure protein | - |
| SCLO_RS15305 () | 3138834..3138974 | - | 141 | WP_066519765.1 | GpE family phage tail protein | - |
| SCLO_RS15310 () | 3138983..3139288 | - | 306 | WP_066519762.1 | phage tail assembly protein | - |
| SCLO_RS15315 () | 3139354..3139869 | - | 516 | WP_066519757.1 | phage major tail tube protein | - |
| SCLO_RS15320 () | 3139900..3141069 | - | 1170 | WP_066519751.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| SCLO_RS15325 () | 3141085..3141432 | - | 348 | WP_066519749.1 | GPW/gp25 family protein | - |
| SCLO_RS15330 () | 3141420..3141959 | - | 540 | WP_066519747.1 | phage baseplate assembly protein V | - |
| SCLO_RS15335 () | 3142009..3142290 | - | 282 | WP_066519744.1 | hypothetical protein | - |
| SCLO_RS23450 () | 3142287..3142916 | - | 630 | WP_066519741.1 | hypothetical protein | - |
| SCLO_RS15345 () | 3142913..3143572 | - | 660 | WP_123905529.1 | hypothetical protein | - |
| SCLO_RS15350 () | 3143582..3144397 | - | 816 | WP_066519737.1 | hypothetical protein | - |
| SCLO_RS15355 () | 3144378..3144575 | - | 198 | WP_066519729.1 | hypothetical protein | - |
| SCLO_RS15360 () | 3144591..3146834 | - | 2244 | WP_157080319.1 | hypothetical protein | - |
| SCLO_RS15365 () | 3146846..3148033 | - | 1188 | WP_066519720.1 | phage tail protein I | - |
| SCLO_RS15370 () | 3148030..3148914 | - | 885 | WP_066519718.1 | baseplate J/gp47 family protein | - |
| SCLO_RS15375 () | 3149001..3149678 | - | 678 | WP_066519711.1 | phage virion morphogenesis protein | - |
| SCLO_RS15380 () | 3149688..3150206 | - | 519 | WP_066519708.1 | phage tail protein | - |
| SCLO_RS15385 () | 3150206..3150388 | - | 183 | WP_083949146.1 | hypothetical protein | - |
| SCLO_RS15390 () | 3150333..3150731 | - | 399 | WP_066519705.1 | hypothetical protein | - |
| SCLO_RS15395 () | 3150728..3151180 | - | 453 | WP_066519702.1 | hypothetical protein | - |
| SCLO_RS15400 () | 3151186..3151518 | - | 333 | WP_066519700.1 | hypothetical protein | - |
| SCLO_RS15405 () | 3151522..3151746 | - | 225 | WP_066519698.1 | tail protein X | - |
| SCLO_RS15410 () | 3151746..3152228 | - | 483 | WP_066519695.1 | head completion/stabilization protein | - |
| SCLO_RS15415 () | 3152225..3152485 | - | 261 | WP_066519693.1 | hypothetical protein | - |
| SCLO_RS15420 () | 3152605..3153396 | - | 792 | WP_066519691.1 | terminase | - |
| SCLO_RS15425 () | 3153449..3154501 | - | 1053 | WP_066519689.1 | phage major capsid protein, P2 family | - |
| SCLO_RS15430 () | 3154541..3155383 | - | 843 | WP_066519686.1 | GPO family capsid scaffolding protein | - |
| SCLO_RS15435 () | 3155587..3157398 | + | 1812 | WP_066519683.1 | terminase family protein | - |
| SCLO_RS15440 () | 3157395..3158444 | + | 1050 | WP_066519682.1 | phage portal protein | - |
| SCLO_RS15445 () | 3158594..3159403 | + | 810 | WP_066519675.1 | DNA adenine methylase | - |
| SCLO_RS15450 () | 3159423..3159710 | - | 288 | WP_066519673.1 | putative addiction module antidote protein | Antitoxin Detail |
| SCLO_RS15455 () | 3159736..3160026 | - | 291 | WP_066519793.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SCLO_RS15460 () | 3160097..3160402 | - | 306 | WP_066519670.1 | hypothetical protein | - |
| SCLO_RS23455 () | 3160399..3160566 | - | 168 | WP_169800571.1 | hypothetical protein | - |
| SCLO_RS15465 () | 3161119..3161802 | - | 684 | WP_066519668.1 | hypothetical protein | - |
| SCLO_RS15475 () | 3162069..3162785 | + | 717 | WP_066519667.1 | queuosine precursor transporter | - |
| SCLO_RS15480 () | 3162782..3163522 | - | 741 | WP_066519663.1 | tRNA pseudouridine(38-40) synthase TruA | - |
| SCLO_RS15485 () | 3163519..3164436 | - | 918 | WP_066519656.1 | methionyl-tRNA formyltransferase | - |
| SCLO_RS15490 () | 3164600..3165700 | - | 1101 | WP_083949140.1 | LPS export ABC transporter permease LptG | - |
| SCLO_RS15495 () | 3165697..3166935 | - | 1239 | WP_096362170.1 | LPS export ABC transporter permease LptF | - |
| SCLO_RS15500 () | 3167062..3167550 | + | 489 | WP_174521977.1 | DUF2141 domain-containing protein | - |
| SCLO_RS15505 () | 3167561..3168530 | + | 970 | Protein_3069 | diacylglycerol kinase | - |
| SCLO_RS15510 () | 3168809..3170158 | + | 1350 | WP_066519643.1 | amidohydrolase | - |
| SCLO_RS15515 () | 3170293..3170718 | + | 426 | WP_083949138.1 | UrcA family protein | - |
| SCLO_RS15520 () | 3170790..3171782 | - | 993 | WP_066519637.1 | nucleotidyltransferase family protein | - |
| SCLO_RS15525 () | 3171779..3172642 | - | 864 | WP_066519632.1 | HprK-related kinase A | - |
| SCLO_RS15530 () | 3172639..3172929 | - | 291 | WP_066519630.1 | HPr-rel-A system PqqD family peptide chaperone | - |
| SCLO_RS15535 () | 3173001..3173429 | - | 429 | WP_066519627.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|