MGE detailed information
MGE type: Prophage MGE length: 28853 bp
Accession: NZ_AP017655 Location: 1020761..1049613 Organism: Sphingobium cloacae strain JCM 10874 Replicon: chromosome
Accession: NZ_AP017655 Location: 1020761..1049613 Organism: Sphingobium cloacae strain JCM 10874 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCLO_RS04990 () | 1016789..1017424 | - | 636 | WP_066514251.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | - |
| SCLO_RS04995 () | 1017518..1018495 | - | 978 | WP_066514324.1 | glycosyltransferase family 2 protein | - |
| SCLO_RS05000 () | 1018868..1020481 | - | 1614 | WP_066514253.1 | trigger factor | - |
| SCLO_RS05010 () | 1020761..1020958 | + | 198 | WP_066514259.1 | hypothetical protein | - |
| SCLO_RS05015 () | 1020974..1021675 | - | 702 | WP_066514261.1 | NAD-dependent deacylase | - |
| SCLO_RS05020 () | 1021761..1022525 | + | 765 | WP_066514263.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| SCLO_RS05025 () | 1022530..1023186 | + | 657 | WP_066514264.1 | endonuclease III | - |
| SCLO_RS05030 () | 1023285..1023683 | + | 399 | WP_066514326.1 | hypothetical protein | - |
| SCLO_RS05040 () | 1024138..1025553 | - | 1416 | WP_066514271.1 | hypothetical protein | - |
| SCLO_RS05045 () | 1025550..1026563 | - | 1014 | WP_066514273.1 | hypothetical protein | - |
| SCLO_RS05050 () | 1026747..1027475 | - | 729 | WP_096362194.1 | IS21 family transposase ISSsp4 | Transposase |
| SCLO_RS05055 () | 1027462..1028976 | - | 1515 | WP_096362065.1 | IS21 family transposase ISSsp4 | Transposase |
| SCLO_RS05060 () | 1029089..1030360 | - | 1272 | WP_066522486.1 | Prophage integrase IntS ; Integrase | Integrase |
| SCLO_RS23250 () | 1030353..1030499 | - | 147 | WP_157080368.1 | hypothetical protein | - |
| SCLO_RS05065 () | 1030496..1032202 | - | 1707 | WP_096362092.1 | hypothetical protein ; Integrase | Integrase |
| SCLO_RS05070 () | 1032219..1032527 | - | 309 | WP_066521712.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| SCLO_RS05075 () | 1032541..1032837 | - | 297 | WP_066521714.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SCLO_RS05080 () | 1032919..1033137 | - | 219 | WP_066521717.1 | hypothetical protein | - |
| SCLO_RS05085 () | 1033146..1033358 | - | 213 | WP_066521719.1 | AlpA family transcriptional regulator | - |
| SCLO_RS05090 () | 1033527..1033991 | - | 465 | WP_066521722.1 | hypothetical protein | - |
| SCLO_RS05095 () | 1034228..1034899 | + | 672 | WP_157080345.1 | hypothetical protein | - |
| SCLO_RS05100 () | 1034981..1035781 | + | 801 | WP_123905447.1 | hypothetical protein | - |
| SCLO_RS05105 () | 1036231..1040001 | + | 3771 | WP_123905448.1 | hypothetical protein | - |
| SCLO_RS05110 () | 1040070..1040804 | - | 735 | WP_066521730.1 | hypothetical protein | - |
| SCLO_RS05115 () | 1040782..1042227 | - | 1446 | WP_083949221.1 | PepSY domain-containing protein | - |
| SCLO_RS05120 () | 1042227..1044686 | - | 2460 | WP_066521731.1 | Fe(3+)-pyochelin receptor | VF |
| SCLO_RS05125 () | 1044808..1045782 | - | 975 | WP_066521732.1 | FecR family protein | - |
| SCLO_RS05130 () | 1045891..1046406 | - | 516 | WP_066521734.1 | RNA polymerase sigma factor | - |
| SCLO_RS05135 () | 1046601..1047062 | + | 462 | Protein_1006 | hypothetical protein ; Integrase | Integrase |
| SCLO_RS05140 () | 1047170..1047802 | - | 633 | WP_066521736.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SCLO_RS05145 () | 1047920..1048210 | + | 291 | WP_007014453.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SCLO_RS05150 () | 1048200..1048502 | + | 303 | WP_169925551.1 | HigA family addiction module antidote protein | - |
| SCLO_RS05155 () | 1048543..1049613 | - | 1071 | WP_066522499.1 | IS630 family transposase ISAzba6 | Transposase |
| SCLO_RS05165 () | 1050673..1050999 | - | 327 | WP_066520735.1 | hypothetical protein | - |
| SCLO_RS05170 () | 1051161..1052382 | - | 1222 | Protein_1013 | putative DNA modification/repair radical SAM protein | - |
| SCLO_RS05175 () | 1052536..1054224 | - | 1689 | WP_066520733.1 | thiamine pyrophosphate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|