MGE detailed information
MGE type: Genomic_island MGE length: 62256 bp
Accession: NZ_AP017620 Location: 4053192..4115447 Organism: Escherichia coli strain MRY15-131 Replicon: chromosome
Accession: NZ_AP017620 Location: 4053192..4115447 Organism: Escherichia coli strain MRY15-131 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPY99_RS20415 () | 4048299..4048979 | - | 681 | WP_001297961.1 | D-lyxose/D-mannose family sugar isomerase | - |
| CPY99_RS20420 () | 4048960..4049892 | - | 933 | WP_000559089.1 | ROK family protein | - |
| CPY99_RS20425 () | 4049940..4050800 | - | 861 | WP_000961378.1 | ketose-bisphosphate aldolase | - |
| CPY99_RS20430 () | 4050881..4051732 | - | 852 | WP_000457128.1 | class II fructose-bisphosphate aldolase family protein | - |
| CPY99_RS20435 () | 4051744..4052835 | - | 1092 | WP_000654324.1 | PTS fructose transporter subunit IIC | - |
| CPY99_RS20440 () | 4052860..4053174 | - | 315 | WP_001028073.1 | fructose PTS transporter subunit IIB | - |
| CPY99_RS20445 () | 4053192..4053662 | - | 471 | WP_000355546.1 | fructose PTS transporter subunit IIA | - |
| CPY99_RS20450 () | 4053689..4055242 | - | 1554 | WP_001177977.1 | PRD domain-containing protein | - |
| CPY99_RS20455 () | 4055537..4057855 | - | 2319 | WP_000702970.1 | alpha-xylosidase | - |
| CPY99_RS20460 () | 4057865..4059247 | - | 1383 | WP_000834422.1 | glycoside-pentoside-hexuronide family transporter | - |
| CPY99_RS20470 () | 4059930..4061111 | + | 1182 | WP_021562904.1 | Prophage integrase IntS ; Integrase | Integrase |
| CPY99_RS20475 () | 4061295..4061651 | - | 357 | WP_061092946.1 | Multiple antibiotic resistance protein MarA | VF |
| CPY99_RS20480 () | 4061708..4061959 | - | 252 | WP_061092945.1 | DUF1471 domain-containing protein | - |
| CPY99_RS20485 () | 4062101..4062873 | - | 773 | Protein_3799 | SDR family oxidoreductase | - |
| CPY99_RS20490 () | 4062966..4063637 | + | 672 | WP_176398622.1 | hypothetical protein | - |
| CPY99_RS20495 () | 4064482..4064682 | + | 201 | WP_061092942.1 | hypothetical protein | - |
| CPY99_RS20500 () | 4065276..4065926 | - | 651 | WP_061092941.1 | Asp/Glu racemase | - |
| CPY99_RS20505 () | 4065923..4066342 | - | 420 | WP_061092940.1 | heme-binding protein | - |
| CPY99_RS20510 () | 4066378..4067688 | - | 1311 | WP_061092939.1 | bile acid:sodium symporter family protein | - |
| CPY99_RS20515 () | 4067710..4068522 | - | 813 | WP_061092938.1 | 3-keto-5-aminohexanoate cleavage protein | - |
| CPY99_RS20520 () | 4068544..4069320 | - | 777 | WP_061092937.1 | TIM barrel protein | - |
| CPY99_RS20525 () | 4069301..4070107 | - | 807 | WP_061092936.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CPY99_RS20530 () | 4070123..4070761 | - | 639 | WP_061092935.1 | aldolase | - |
| CPY99_RS20535 () | 4070758..4072020 | - | 1263 | WP_061092934.1 | four-carbon acid sugar kinase family protein | - |
| CPY99_RS20545 () | 4072677..4072880 | + | 204 | WP_096427327.1 | transposase | - |
| CPY99_RS20555 () | 4072930..4073607 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CPY99_RS20560 () | 4073607..4073954 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CPY99_RS20565 () | 4073974..4075362 | + | 1389 | Protein_3813 | IS66 family transposase ISCro1 | Transposase |
| CPY99_RS20575 () | 4076423..4076497 | + | 75 | WP_072275316.1 | tryptophanase leader peptide | - |
| CPY99_RS20580 () | 4076704..4078119 | + | 1416 | WP_061092932.1 | tryptophanase | - |
| CPY99_RS20585 () | 4078211..4079458 | + | 1248 | WP_061092931.1 | low affinity tryptophan permease TnaB | - |
| CPY99_RS20595 () | 4079879..4080249 | + | 371 | Protein_3817 | PTS beta-glucoside transporter subunit EIIBCA | - |
| CPY99_RS20600 () | 4080542..4080886 | + | 345 | Protein_3818 | alpha-galactosidase | - |
| CPY99_RS27315 () | 4080875..4081021 | - | 147 | Protein_3819 | transposase | - |
| CPY99_RS20605 () | 4081016..4081336 | - | 321 | Protein_3820 | DNA-binding protein | - |
| CPY99_RS20610 () | 4081604..4082152 | - | 549 | WP_061092929.1 | hypothetical protein | - |
| CPY99_RS20615 () | 4082166..4082392 | - | 227 | Protein_3822 | hypothetical protein | - |
| CPY99_RS20620 () | 4082404..4082637 | - | 234 | WP_061092928.1 | AlpA family transcriptional regulator | - |
| CPY99_RS20625 () | 4082706..4083281 | - | 576 | Protein_3824 | hypothetical protein | - |
| CPY99_RS20630 () | 4083528..4084094 | - | 567 | WP_060579145.1 | inovirus-type Gp2 protein | - |
| CPY99_RS20635 () | 4085395..4086489 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| CPY99_RS20640 () | 4086508..4087757 | - | 1250 | Protein_3827 | NupC/NupG family nucleoside CNT transporter | - |
| CPY99_RS20645 () | 4087841..4088776 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| CPY99_RS20650 () | 4088769..4089703 | - | 935 | Protein_3829 | pseudouridine kinase | - |
| CPY99_RS20655 () | 4090239..4090691 | - | 453 | WP_000558152.1 | N-acetyltransferase | - |
| CPY99_RS20665 () | 4091212..4091943 | - | 732 | WP_061092927.1 | inovirus Gp2 family protein | - |
| CPY99_RS20675 () | 4094657..4095880 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| CPY99_RS20685 () | 4095981..4096865 | + | 885 | WP_061093096.1 | 50S ribosome-binding GTPase | - |
| CPY99_RS20690 () | 4097068..4097748 | + | 681 | WP_001282921.1 | WYL domain-containing protein | - |
| CPY99_RS20695 () | 4097896..4098573 | + | 678 | WP_001097302.1 | hypothetical protein | - |
| CPY99_RS20700 () | 4098579..4098812 | + | 234 | WP_001278293.1 | DUF905 family protein | - |
| CPY99_RS20705 () | 4098902..4099720 | + | 819 | WP_001175165.1 | DUF945 domain-containing protein | - |
| CPY99_RS20710 () | 4099986..4100465 | + | 480 | WP_000706978.1 | antirestriction protein | - |
| CPY99_RS20715 () | 4100480..4100956 | + | 477 | WP_001186188.1 | RadC family protein | - |
| CPY99_RS20720 () | 4101019..4101240 | + | 222 | WP_061092892.1 | DUF987 domain-containing protein | - |
| CPY99_RS20725 () | 4101403..4101777 | + | 375 | WP_061092893.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CPY99_RS20730 () | 4101824..4102201 | + | 378 | WP_061092894.1 | TA system toxin CbtA family protein | Toxin Detail |
| CPY99_RS20735 () | 4102198..4102686 | + | 489 | WP_061092895.1 | hypothetical protein | - |
| CPY99_RS20740 () | 4102698..4102895 | + | 198 | WP_012908799.1 | DUF957 domain-containing protein | - |
| CPY99_RS20745 () | 4102980..4103822 | + | 843 | WP_061092922.1 | DUF4942 domain-containing protein | - |
| CPY99_RS20755 () | 4104090..4104236 | + | 147 | WP_001328030.1 | hypothetical protein | - |
| CPY99_RS20760 () | 4104620..4105804 | + | 1185 | WP_001172864.1 | sugar efflux transporter | - |
| CPY99_RS20765 () | 4105915..4106838 | + | 924 | WP_000535959.1 | carboxylate/amino acid/amine transporter | - |
| CPY99_RS20770 () | 4106842..4107660 | - | 819 | WP_000779401.1 | Lipoprotein 28 | VF |
| CPY99_RS20775 () | 4107869..4108162 | + | 294 | WP_001306625.1 | hypothetical protein | - |
| CPY99_RS20780 () | 4108464..4108961 | + | 498 | WP_000443165.1 | Chaperone protein IpgC | VF |
| CPY99_RS20785 () | 4108971..4109153 | + | 183 | WP_001024523.1 | hypothetical protein | - |
| CPY99_RS20790 () | 4109209..4110990 | + | 1782 | WP_061092896.1 | type III cell invasion protein SipB | - |
| CPY99_RS20795 () | 4111003..4112154 | + | 1152 | WP_000257042.1 | hypothetical protein | - |
| CPY99_RS20800 () | 4112198..4113547 | + | 1350 | WP_000608461.1 | Cell invasion protein SipD | VF |
| CPY99_RS20805 () | 4113750..4115447 | + | 1698 | WP_001176832.1 | Transcriptional regulator HilA | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|