MGE detailed information
MGE type: Prophage MGE length: 51980 bp
Accession: NZ_AP017377 Location: 1242276..1294255 Organism: Staphylococcus aureus strain OC8 Replicon: chromosome
Accession: NZ_AP017377 Location: 1242276..1294255 Organism: Staphylococcus aureus strain OC8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATE38_RS06275 () | 1237445..1238176 | + | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| ATE38_RS06280 () | 1238169..1238711 | + | 543 | WP_000368653.1 | SMC-Scp complex subunit ScpB | - |
| ATE38_RS06285 () | 1238704..1239441 | + | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| ATE38_RS06290 () | 1239574..1240299 | + | 726 | WP_000064078.1 | two-component system response regulator SrrA | - |
| ATE38_RS06295 () | 1240280..1242031 | + | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| ATE38_RS06300 () | 1242276..1243204 | + | 929 | Protein_1185 | DUF1672 domain-containing protein | - |
| ATE38_RS06305 () | 1243197..1245224 | + | 2028 | WP_001797354.1 | hypothetical protein | - |
| ATE38_RS06310 () | 1245267..1246472 | - | 1206 | WP_000264751.1 | site-specific integrase | - |
| ATE38_RS06315 () | 1246598..1247221 | + | 624 | WP_001166484.1 | hypothetical protein | - |
| ATE38_RS06320 () | 1247367..1247549 | - | 183 | WP_000705240.1 | hypothetical protein | - |
| ATE38_RS06325 () | 1247645..1248565 | - | 921 | WP_000348133.1 | 3'-5' exoribonuclease | - |
| ATE38_RS06330 () | 1248581..1249195 | - | 615 | WP_000801423.1 | XRE family transcriptional regulator | - |
| ATE38_RS06335 () | 1249367..1249594 | + | 228 | WP_001030311.1 | hypothetical protein | - |
| ATE38_RS06340 () | 1249620..1250396 | + | 777 | WP_001148559.1 | phage antirepressor | - |
| ATE38_RS06345 () | 1250412..1250630 | + | 219 | WP_001001383.1 | hypothetical protein | - |
| ATE38_RS06350 () | 1250680..1250925 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| ATE38_RS06355 () | 1250894..1251259 | - | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| ATE38_RS06360 () | 1251314..1251529 | + | 216 | WP_001097552.1 | hypothetical protein | - |
| ATE38_RS06365 () | 1251556..1251819 | + | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| ATE38_RS06370 () | 1251832..1251993 | + | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| ATE38_RS06375 () | 1252072..1252395 | + | 324 | WP_000174994.1 | hypothetical protein | - |
| ATE38_RS06380 () | 1252410..1252772 | + | 363 | WP_000985976.1 | hypothetical protein | - |
| ATE38_RS06385 () | 1252769..1253935 | + | 1167 | WP_000762548.1 | DUF2800 domain-containing protein | - |
| ATE38_RS06390 () | 1253961..1254518 | + | 558 | WP_000645048.1 | DUF2815 family protein | - |
| ATE38_RS06395 () | 1254586..1256538 | + | 1953 | WP_075583731.1 | DNA polymerase | - |
| ATE38_RS06400 () | 1256551..1256736 | + | 186 | WP_001164629.1 | DUF3113 family protein | - |
| ATE38_RS06405 () | 1256736..1257137 | + | 402 | WP_000113974.1 | PVL family protein | - |
| ATE38_RS06410 () | 1257137..1257394 | + | 258 | WP_000022728.1 | DUF3310 domain-containing protein | - |
| ATE38_RS06415 () | 1257397..1257597 | + | 201 | WP_000235324.1 | hypothetical protein | - |
| ATE38_RS06420 () | 1257612..1257854 | + | 243 | WP_000132191.1 | hypothetical protein | - |
| ATE38_RS06425 () | 1257869..1258117 | + | 249 | WP_001065075.1 | DUF1024 family protein | - |
| ATE38_RS06430 () | 1258110..1258637 | + | 528 | WP_000185638.1 | dUTP pyrophosphatase | - |
| ATE38_RS06435 () | 1258674..1258910 | + | 237 | WP_000195806.1 | DUF1381 domain-containing protein | - |
| ATE38_RS06440 () | 1258935..1259171 | + | 237 | WP_000483477.1 | hypothetical protein | - |
| ATE38_RS06445 () | 1259161..1259547 | + | 387 | WP_024937089.1 | hypothetical protein | - |
| ATE38_RS06450 () | 1259547..1259699 | + | 153 | WP_024937088.1 | transcriptional regulator | - |
| ATE38_RS06455 () | 1259767..1259967 | + | 201 | WP_000265258.1 | DUF1514 family protein | - |
| ATE38_RS06460 () | 1260019..1262466 | + | 2448 | WP_000884864.1 | virulence-associated E family protein | - |
| ATE38_RS06470 () | 1262569..1262673 | - | 105 | WP_001802079.1 | hypothetical protein | - |
| ATE38_RS06475 () | 1262807..1263097 | + | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| ATE38_RS06480 () | 1263078..1264445 | + | 1368 | WP_001802078.1 | DEAD/DEAH box helicase | - |
| ATE38_RS06485 () | 1264458..1264895 | + | 438 | WP_000513699.1 | transcriptional regulator | - |
| ATE38_RS06490 () | 1265041..1265355 | + | 315 | WP_000160689.1 | HNH endonuclease | - |
| ATE38_RS06495 () | 1265484..1265789 | + | 306 | WP_024937087.1 | P27 family phage terminase small subunit | - |
| ATE38_RS06500 () | 1265779..1267470 | + | 1692 | WP_000153554.1 | terminase large subunit | - |
| ATE38_RS06505 () | 1267475..1268713 | + | 1239 | WP_001100664.1 | phage portal protein | - |
| ATE38_RS06510 () | 1268697..1269470 | + | 774 | WP_000061866.1 | Clp protease ClpP | - |
| ATE38_RS06515 () | 1269482..1270645 | + | 1164 | WP_001142734.1 | phage major capsid protein | - |
| ATE38_RS06520 () | 1270714..1270992 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| ATE38_RS06525 () | 1271004..1271336 | + | 333 | WP_000395498.1 | hypothetical protein | - |
| ATE38_RS06530 () | 1271333..1271734 | + | 402 | WP_000110023.1 | hypothetical protein | - |
| ATE38_RS06535 () | 1271735..1272130 | + | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| ATE38_RS06540 () | 1272165..1272806 | + | 642 | WP_000807536.1 | tail protein | - |
| ATE38_RS06545 () | 1272898..1273353 | + | 456 | WP_024937086.1 | Ig domain-containing protein | - |
| ATE38_RS06550 () | 1273411..1273761 | + | 351 | WP_000589167.1 | hypothetical protein | - |
| ATE38_RS06555 () | 1273803..1273961 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| ATE38_RS06560 () | 1273975..1280175 | + | 6201 | WP_024937085.1 | phage tail tape measure protein | - |
| ATE38_RS06565 () | 1280175..1280999 | + | 825 | WP_001190527.1 | phage tail family protein | - |
| ATE38_RS06570 () | 1281008..1282591 | + | 1584 | WP_000384472.1 | prophage endopeptidase tail family protein | - |
| ATE38_RS06575 () | 1282591..1282881 | + | 291 | WP_000179858.1 | hypothetical protein | - |
| ATE38_RS06580 () | 1282897..1284807 | + | 1911 | WP_000429558.1 | minor structural protein | - |
| ATE38_RS06585 () | 1284807..1286273 | + | 1467 | WP_000067127.1 | BppU family phage baseplate upper protein | - |
| ATE38_RS06590 () | 1286273..1286662 | + | 390 | WP_001166596.1 | DUF2977 domain-containing protein | - |
| ATE38_RS06595 () | 1286655..1286819 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| ATE38_RS06600 () | 1286865..1287164 | + | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| ATE38_RS06605 () | 1287300..1287602 | + | 303 | WP_000339144.1 | phage holin | - |
| ATE38_RS06610 () | 1287613..1289067 | + | 1455 | WP_000909210.1 | N-acetylmuramoyl-L-alanine amidase | - |
| ATE38_RS06620 () | 1289683..1290519 | + | 837 | WP_000675478.1 | hypothetical protein | - |
| ATE38_RS15315 () | 1290896..1291111 | + | 216 | WP_170267452.1 | hypothetical protein | - |
| ATE38_RS06630 () | 1291202..1292119 | + | 918 | WP_000476873.1 | DUF1672 domain-containing protein | - |
| ATE38_RS06635 () | 1292177..1293127 | + | 951 | WP_000472939.1 | DUF1672 domain-containing protein | - |
| ATE38_RS06640 () | 1293120..1293326 | + | 207 | WP_001033757.1 | hypothetical protein | - |
| ATE38_RS06645 () | 1293341..1294255 | + | 915 | WP_000913219.1 | DUF1672 domain-containing protein | - |
| ATE38_RS06650 () | 1294454..1294573 | + | 120 | WP_001789947.1 | hypothetical protein | - |
| ATE38_RS06655 () | 1294852..1295397 | + | 546 | WP_001186912.1 | ECF transporter S component | - |
| ATE38_RS06660 () | 1295503..1295751 | - | 249 | WP_001151997.1 | ferredoxin | - |
| ATE38_RS06665 () | 1295859..1296812 | + | 954 | WP_001163801.1 | helix-turn-helix domain-containing protein | - |
| ATE38_RS06670 () | 1296802..1298181 | + | 1380 | WP_000902119.1 | ATP-dependent DNA helicase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|