MGE detailed information
MGE type: Prophage MGE length: 65173 bp
Accession: NZ_AP017320 Location: 1926994..1992166 Organism: Staphylococcus aureus strain MI Replicon: chromosome
Accession: NZ_AP017320 Location: 1926994..1992166 Organism: Staphylococcus aureus strain MI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAMI_RS09560 () | 1922807..1923553 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| SAMI_RS09565 () | 1923558..1924031 | - | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| SAMI_RS09570 () | 1924097..1924354 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| SAMI_RS09575 () | 1924351..1925352 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| SAMI_RS09580 () | 1925357..1926835 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| SAMI_RS09585 () | 1926994..1927449 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| SAMI_RS09590 () | 1927752..1928402 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| SAMI_RS09595 () | 1928483..1929478 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| SAMI_RS09600 () | 1929553..1930179 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| SAMI_RS09605 () | 1930220..1930561 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| SAMI_RS09610 () | 1930662..1931234 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| SAMI_RS15320 () | 1931432..1932444 | - | 1013 | Protein_1850 | IS3 family transposase ISClsp1 | Transposase |
| SAMI_RS15680 () | 1932589..1932684 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| SAMI_RS09630 () | 1932807..1932908 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| SAMI_RS15685 () | 1932886..1933047 | - | 162 | Protein_1853 | transposase | - |
| SAMI_RS09635 () | 1933038..1933532 | - | 495 | Protein_1854 | IS21 family transposase IS232 | Transposase |
| SAMI_RS09640 () | 1933984..1935213 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| SAMI_RS09645 () | 1935206..1936762 | - | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
| SAMI_RS09650 () | 1936912..1937046 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| SAMI_RS09655 () | 1937109..1937828 | - | 720 | WP_001038752.1 | Serine protease SplF | VF |
| SAMI_RS15690 () | 1937930..1938037 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| SAMI_RS09660 () | 1937986..1938705 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| SAMI_RS09665 () | 1938826..1939545 | - | 720 | WP_001038872.1 | Serine protease SplC | VF |
| SAMI_RS09670 () | 1939603..1940325 | - | 723 | WP_001039454.1 | Serine protease SplB | VF |
| SAMI_RS09675 () | 1940450..1941157 | - | 708 | WP_001039427.1 | Serine protease SplA | VF |
| SAMI_RS09685 () | 1942121..1942702 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| SAMI_RS09690 () | 1943175..1943463 | - | 289 | Protein_1865 | BsaG protein | - |
| SAMI_RS09695 () | 1943649..1944122 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| SAMI_RS09700 () | 1944127..1944918 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| SAMI_RS09705 () | 1945288..1946271 | - | 984 | WP_000782463.1 | Leucotoxin LukDv | VF |
| SAMI_RS09710 () | 1946273..1947208 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| SAMI_RS15800 () | 1948104..1948535 | + | 432 | Protein_1870 | hypothetical protein | - |
| SAMI_RS09720 () | 1948572..1949360 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| SAMI_RS09725 () | 1950194..1950688 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| SAMI_RS09730 () | 1950766..1951002 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| SAMI_RS09735 () | 1951023..1951799 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| SAMI_RS09740 () | 1952351..1953127 | - | 777 | WP_000736712.1 | Enterotoxin type G | VF |
| SAMI_RS09745 () | 1953410..1954165 | - | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| SAMI_RS15695 () | 1954204..1954975 | - | 772 | Protein_1877 | Enterotoxin type C-1 | VF |
| SAMI_RS09760 () | 1955129..1955857 | - | 729 | WP_000713847.1 | Enterotoxin type A | VF |
| SAMI_RS09765 () | 1955892..1956611 | - | 720 | WP_000821658.1 | Enterotoxin type D | VF |
| SAMI_RS09770 () | 1956892..1957674 | - | 783 | WP_010922839.1 | Enterotoxin type D | VF |
| SAMI_RS09815 () | 1959034..1959588 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| SAMI_RS09825 () | 1959911..1961311 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| SAMI_RS09830 () | 1961335..1962258 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| SAMI_RS09835 () | 1962316..1963353 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| SAMI_RS09840 () | 1963343..1963453 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| SAMI_RS09845 () | 1963616..1964119 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
| SAMI_RS09850 () | 1964243..1965466 | - | 1224 | WP_000551836.1 | ABC transporter permease | - |
| SAMI_RS09855 () | 1965459..1966199 | - | 741 | WP_000216874.1 | ABC-type transporter ATP-binding protein EcsA | VF |
| SAMI_RS09860 () | 1966333..1966755 | + | 423 | WP_000004981.1 | HIT family protein | - |
| SAMI_RS09865 () | 1966897..1967262 | + | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| SAMI_RS09870 () | 1967997..1968554 | + | 558 | WP_000477959.1 | DUF3267 domain-containing protein | - |
| SAMI_RS09875 () | 1968759..1969721 | + | 963 | WP_000782121.1 | Foldase protein PrsA | VF |
| SAMI_RS09880 () | 1969842..1970783 | - | 942 | WP_001244175.1 | 3'-5' exoribonuclease YhaM | - |
| SAMI_RS09885 () | 1970780..1973716 | - | 2937 | WP_000584628.1 | AAA family ATPase | - |
| SAMI_RS09890 () | 1973706..1974902 | - | 1197 | WP_000238227.1 | exonuclease SbcCD subunit D | - |
| SAMI_RS09895 () | 1975193..1975291 | - | 99 | WP_001802255.1 | hypothetical protein | - |
| SAMI_RS09900 () | 1975830..1976174 | - | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| SAMI_RS09905 () | 1976243..1977367 | - | 1125 | WP_000992518.1 | DUF445 domain-containing protein | - |
| SAMI_RS09910 () | 1977546..1978010 | - | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| SAMI_RS09915 () | 1978366..1978989 | - | 624 | WP_001045135.1 | Transcriptional regulatory protein LiaR | VF |
| SAMI_RS09920 () | 1979011..1980123 | - | 1113 | WP_000437969.1 | GAF domain-containing sensor histidine kinase | - |
| SAMI_RS09925 () | 1980286..1981107 | + | 822 | WP_000669376.1 | RluA family pseudouridine synthase | - |
| SAMI_RS09930 () | 1981560..1982945 | - | 1386 | WP_000116228.1 | class II fumarate hydratase | - |
| SAMI_RS09935 () | 1983141..1983536 | - | 396 | WP_000901023.1 | hypothetical protein | - |
| SAMI_RS09940 () | 1984084..1984236 | - | 153 | WP_000031108.1 | hypothetical protein | Toxin Detail |
| SAMI_RS09945 () | 1984261..1984860 | - | 600 | WP_001251224.1 | glucosamine-6-phosphate isomerase | Antitoxin Detail |
| SAMI_RS09950 () | 1985019..1985489 | - | 471 | WP_000181394.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| SAMI_RS09955 () | 1985494..1986621 | - | 1128 | WP_000379980.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
| SAMI_RS09960 () | 1986772..1987494 | - | 723 | WP_000590809.1 | L-cystine import ATP-binding protein TcyC | VF |
| SAMI_RS09965 () | 1987487..1988944 | - | 1458 | WP_000649908.1 | ABC transporter permease subunit | - |
| SAMI_RS09970 () | 1989202..1990263 | - | 1062 | WP_000063582.1 | PTS transporter subunit IIC | - |
| SAMI_RS09975 () | 1990847..1992166 | + | 1320 | WP_001557163.1 | ISL3 family transposase IS1181 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|