MGE detailed information
MGE type: Prophage MGE length: 73381 bp
Accession: NZ_AP017320 Location: 1556161..1629541 Organism: Staphylococcus aureus strain MI Replicon: chromosome
Accession: NZ_AP017320 Location: 1556161..1629541 Organism: Staphylococcus aureus strain MI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAMI_RS07605 () | 1552430..1553809 | - | 1380 | WP_000902099.1 | ATP-dependent DNA helicase | - |
| SAMI_RS07610 () | 1553799..1554752 | - | 954 | WP_001163801.1 | helix-turn-helix domain-containing protein | - |
| SAMI_RS07615 () | 1554860..1555108 | + | 249 | WP_001151997.1 | ferredoxin | - |
| SAMI_RS07620 () | 1555214..1555759 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| SAMI_RS07625 () | 1556161..1557117 | - | 957 | WP_000913227.1 | DUF1672 domain-containing protein | - |
| SAMI_RS15835 () | 1557171..1557576 | - | 406 | Protein_1460 | hypothetical protein | - |
| SAMI_RS07640 () | 1557588..1558484 | - | 897 | WP_000476354.1 | DUF1672 domain-containing protein | - |
| SAMI_RS07645 () | 1558542..1559447 | - | 906 | WP_000476865.1 | DUF1672 domain-containing protein | - |
| SAMI_RS07650 () | 1559537..1559752 | - | 216 | WP_000209712.1 | hypothetical protein | - |
| SAMI_RS07660 () | 1560474..1561928 | - | 1455 | WP_000930258.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SAMI_RS07665 () | 1561940..1562242 | - | 303 | WP_000339146.1 | phage holin | - |
| SAMI_RS07670 () | 1562378..1562677 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| SAMI_RS07675 () | 1562723..1562887 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| SAMI_RS07680 () | 1562880..1563269 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| SAMI_RS07685 () | 1563269..1564735 | - | 1467 | WP_000067122.1 | BppU family phage baseplate upper protein | - |
| SAMI_RS07690 () | 1564735..1566645 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| SAMI_RS07695 () | 1566661..1566951 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| SAMI_RS07700 () | 1566951..1568534 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| SAMI_RS07705 () | 1568543..1569367 | - | 825 | WP_001190530.1 | phage tail family protein | - |
| SAMI_RS07710 () | 1569367..1575576 | - | 6210 | WP_001003417.1 | phage tail tape measure protein | - |
| SAMI_RS07715 () | 1575590..1575748 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| SAMI_RS07720 () | 1575790..1576140 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| SAMI_RS07725 () | 1576198..1576653 | - | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| SAMI_RS07730 () | 1576745..1577386 | - | 642 | WP_000807536.1 | tail protein | - |
| SAMI_RS07735 () | 1577421..1577816 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| SAMI_RS07740 () | 1577817..1578218 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| SAMI_RS07745 () | 1578215..1578547 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| SAMI_RS07750 () | 1578559..1578837 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| SAMI_RS07755 () | 1578906..1580069 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| SAMI_RS07760 () | 1580081..1580854 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| SAMI_RS07765 () | 1580838..1582076 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| SAMI_RS07770 () | 1582081..1583772 | - | 1692 | WP_000153555.1 | terminase large subunit | - |
| SAMI_RS07775 () | 1583762..1584067 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| SAMI_RS07780 () | 1584196..1584510 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| SAMI_RS07785 () | 1584667..1585104 | - | 438 | Protein_1489 | transcriptional regulator | - |
| SAMI_RS07790 () | 1585117..1586484 | - | 1368 | WP_001802078.1 | DEAD/DEAH box helicase | - |
| SAMI_RS07795 () | 1586465..1586755 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| SAMI_RS07800 () | 1586889..1586993 | + | 105 | WP_001802079.1 | hypothetical protein | - |
| SAMI_RS07805 () | 1587096..1589543 | - | 2448 | Protein_1493 | virulence-associated E family protein | - |
| SAMI_RS07810 () | 1589595..1589795 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| SAMI_RS07815 () | 1589863..1590015 | - | 153 | WP_000595272.1 | transcriptional activator RinB | - |
| SAMI_RS07820 () | 1590008..1590244 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| SAMI_RS07825 () | 1590269..1590502 | - | 234 | WP_001199737.1 | DUF1381 domain-containing protein | - |
| SAMI_RS07830 () | 1590502..1590702 | - | 201 | WP_001034430.1 | hypothetical protein | - |
| SAMI_RS07835 () | 1590699..1590944 | - | 246 | WP_001106583.1 | hypothetical protein | - |
| SAMI_RS07840 () | 1590981..1591514 | - | 534 | WP_000185643.1 | dUTP pyrophosphatase | - |
| SAMI_RS07845 () | 1591507..1591755 | - | 249 | WP_001065070.1 | DUF1024 family protein | - |
| SAMI_RS07850 () | 1591748..1592056 | - | 309 | WP_000144703.1 | hypothetical protein | - |
| SAMI_RS07855 () | 1592053..1592400 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| SAMI_RS07860 () | 1592397..1592801 | - | 405 | WP_000695756.1 | hypothetical protein | - |
| SAMI_RS07865 () | 1592804..1593010 | - | 207 | WP_000693995.1 | hypothetical protein | - |
| SAMI_RS07870 () | 1593024..1593272 | - | 249 | WP_073546265.1 | hypothetical protein | - |
| SAMI_RS07875 () | 1593272..1593526 | - | 255 | WP_000022738.1 | DUF3310 domain-containing protein | - |
| SAMI_RS07880 () | 1593526..1593885 | - | 360 | WP_000029382.1 | hypothetical protein | - |
| SAMI_RS07885 () | 1593886..1594071 | - | 186 | WP_001187249.1 | DUF3113 family protein | - |
| SAMI_RS15260 () | 1594071..1594226 | - | 156 | WP_000152769.1 | hypothetical protein | - |
| SAMI_RS07890 () | 1594238..1596190 | - | 1953 | WP_075345100.1 | DNA polymerase | - |
| SAMI_RS07895 () | 1596259..1596816 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| SAMI_RS07900 () | 1596842..1598008 | - | 1167 | WP_000762546.1 | DUF2800 domain-containing protein | - |
| SAMI_RS07905 () | 1598005..1598367 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| SAMI_RS07910 () | 1598382..1598705 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| SAMI_RS07915 () | 1598784..1598945 | - | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| SAMI_RS07920 () | 1598958..1599221 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| SAMI_RS07925 () | 1599248..1599463 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| SAMI_RS07930 () | 1599518..1599883 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| SAMI_RS07935 () | 1599852..1600097 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| SAMI_RS07940 () | 1600164..1600544 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| SAMI_RS07945 () | 1600531..1600728 | - | 198 | WP_001148860.1 | hypothetical protein | - |
| SAMI_RS07950 () | 1600798..1601010 | + | 213 | WP_000362643.1 | hypothetical protein | - |
| SAMI_RS15795 () | 1601051..1601200 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| SAMI_RS07955 () | 1601215..1601658 | - | 444 | WP_000435357.1 | hypothetical protein | - |
| SAMI_RS07960 () | 1601706..1601918 | - | 213 | WP_000213811.1 | helix-turn-helix transcriptional regulator | - |
| SAMI_RS07965 () | 1602070..1602801 | + | 732 | WP_000511090.1 | XRE family transcriptional regulator | - |
| SAMI_RS07970 () | 1602872..1603054 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| SAMI_RS07975 () | 1603091..1603237 | + | 147 | WP_001794606.1 | hypothetical protein | - |
| SAMI_RS07980 () | 1603234..1603848 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| SAMI_RS07985 () | 1603974..1605179 | + | 1206 | WP_000264751.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SAMI_RS07990 () | 1605222..1607249 | - | 2028 | WP_001558502.1 | hypothetical protein | - |
| SAMI_RS07995 () | 1607242..1608168 | - | 927 | WP_001557355.1 | DUF1672 domain-containing protein | - |
| SAMI_RS08000 () | 1608412..1610163 | - | 1752 | WP_000987774.1 | two-component system sensor histidine kinase SrrB | - |
| SAMI_RS08005 () | 1610144..1610869 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| SAMI_RS08010 () | 1611002..1611739 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| SAMI_RS08015 () | 1611732..1612274 | - | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| SAMI_RS08020 () | 1612267..1612998 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| SAMI_RS08025 () | 1613090..1613596 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| SAMI_RS08030 () | 1613674..1614561 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| SAMI_RS08035 () | 1614610..1615059 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| SAMI_RS08040 () | 1615164..1615706 | - | 543 | WP_000365240.1 | NUDIX hydrolase | - |
| SAMI_RS08045 () | 1615788..1616696 | + | 909 | WP_001171335.1 | aldo/keto reductase | - |
| SAMI_RS08050 () | 1616912..1617160 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| SAMI_RS08055 () | 1617176..1617931 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| SAMI_RS08060 () | 1618073..1618888 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| SAMI_RS08065 () | 1618991..1619911 | - | 921 | WP_000454063.1 | ribonuclease Z | - |
| SAMI_RS08070 () | 1620224..1621708 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| SAMI_RS08075 () | 1621938..1622804 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| SAMI_RS08080 () | 1622886..1624535 | - | 1650 | WP_001041912.1 | alpha-glucosidase | - |
| SAMI_RS08085 () | 1624551..1625570 | - | 1020 | WP_000256319.1 | HTH-type transcriptional regulator MalR | VF |
| SAMI_RS08090 () | 1625571..1625825 | - | 255 | WP_001792107.1 | hypothetical protein | - |
| SAMI_RS08095 () | 1625764..1626135 | - | 372 | WP_000413436.1 | VOC family protein | - |
| SAMI_RS08100 () | 1626602..1627819 | - | 1218 | WP_000122710.1 | MFS transporter | - |
| SAMI_RS08105 () | 1628135..1629541 | - | 1407 | WP_000193707.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| SAMI_RS08110 () | 1629609..1630742 | - | 1134 | WP_000606693.1 | tripeptidase T | - |
| SAMI_RS08115 () | 1631005..1631184 | + | 180 | WP_001789875.1 | stressosome-associated protein Prli42 | - |
| SAMI_RS08120 () | 1631311..1632291 | - | 981 | WP_000916196.1 | aromatic acid exporter family protein | - |
| SAMI_RS08125 () | 1632305..1632742 | - | 438 | WP_000367419.1 | BrxA/BrxB family bacilliredoxin | - |
| SAMI_RS08130 () | 1633093..1634367 | - | 1275 | WP_000406838.1 | 2-oxo acid dehydrogenase subunit E2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|