MGE detailed information
MGE type: Prophage MGE length: 41761 bp
Accession: NZ_AP014921 Location: 846038..887798 Organism: Staphylococcus aureus strain JH4899 Replicon: chromosome
Accession: NZ_AP014921 Location: 846038..887798 Organism: Staphylococcus aureus strain JH4899 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSA_RS04210 () | 841493..841726 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| JSA_RS04215 () | 841842..842582 | + | 741 | WP_001165952.1 | carboxylesterase | - |
| JSA_RS04220 () | 842616..844988 | + | 2373 | WP_096391864.1 | ribonuclease R | - |
| JSA_RS04225 () | 845010..845474 | + | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| JSA_RS04235 () | 846038..847144 | - | 1107 | WP_000121224.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| JSA_RS04240 () | 847150..847797 | - | 648 | WP_078064262.1 | helix-turn-helix transcriptional regulator | - |
| JSA_RS04245 () | 847955..848161 | + | 207 | WP_001060953.1 | hypothetical protein | - |
| JSA_RS04250 () | 848197..848424 | + | 228 | WP_000164237.1 | helix-turn-helix domain-containing protein | - |
| JSA_RS04255 () | 848421..848594 | + | 174 | WP_000784892.1 | hypothetical protein | - |
| JSA_RS04260 () | 848561..848764 | + | 204 | WP_001231376.1 | hypothetical protein | - |
| JSA_RS04265 () | 848766..849149 | + | 384 | WP_000403838.1 | hypothetical protein | - |
| JSA_RS04270 () | 849150..849458 | + | 309 | WP_053819376.1 | DUF1474 family protein | - |
| JSA_RS04275 () | 849518..851130 | + | 1613 | Protein_788 | phage resistance protein | - |
| JSA_RS04280 () | 851301..852104 | + | 804 | WP_000148371.1 | bifunctional DNA primase/polymerase | - |
| JSA_RS04285 () | 852091..852363 | + | 273 | WP_001149387.1 | hypothetical protein | - |
| JSA_RS04290 () | 852365..853006 | + | 642 | WP_001019770.1 | hypothetical protein | - |
| JSA_RS04295 () | 853353..853694 | + | 342 | WP_001161659.1 | hypothetical protein | - |
| JSA_RS04300 () | 853706..854284 | + | 579 | WP_000846292.1 | hypothetical protein | - |
| JSA_RS04305 () | 854302..854520 | + | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| JSA_RS04310 () | 854571..855098 | + | 528 | WP_000771356.1 | spore coat protein | - |
| JSA_RS04315 () | 855101..855442 | + | 342 | WP_000358778.1 | hypothetical protein | - |
| JSA_RS04320 () | 855439..856008 | + | 570 | WP_096391866.1 | terminase small subunit | - |
| JSA_RS04325 () | 856163..856867 | - | 705 | WP_001035599.1 | Toxic shock syndrome toxin-1 | VF |
| JSA_RS04330 () | 857744..858304 | - | 561 | WP_001035616.1 | DUF4888 domain-containing protein | - |
| JSA_RS04335 () | 859092..859892 | + | 801 | WP_000278088.1 | Enterotoxin type C-3 | VF |
| JSA_RS04340 () | 860059..860781 | - | 723 | WP_001574561.1 | Enterotoxin type A | VF |
| JSA_RS14895 () | 861429..861710 | + | 282 | WP_001788408.1 | hypothetical protein | - |
| JSA_RS04350 () | 861977..862300 | - | 324 | WP_001058299.1 | hypothetical protein | - |
| JSA_RS04355 () | 862526..863253 | - | 728 | Protein_804 | DUF5067 domain-containing protein | - |
| JSA_RS04360 () | 863674..864846 | + | 1173 | WP_000195431.1 | IS256 family transposase IS256 | Transposase |
| JSA_RS04365 () | 865021..865176 | + | 156 | WP_001790158.1 | hypothetical protein | - |
| JSA_RS04370 () | 865184..865705 | + | 522 | WP_000608179.1 | hypothetical protein | - |
| JSA_RS04375 () | 865844..866374 | + | 531 | WP_001167175.1 | N-acetyltransferase | - |
| JSA_RS04380 () | 866637..869420 | + | 2784 | WP_001056221.1 | Clumping factor A | VF |
| JSA_RS04385 () | 869641..871167 | + | 1527 | WP_000791729.1 | Staphylocoagulase | VF |
| JSA_RS04390 () | 871518..872540 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| JSA_RS04395 () | 872875..873345 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| JSA_RS04400 () | 873686..874372 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| JSA_RS04405 () | 874729..874929 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| JSA_RS04410 () | 875426..875644 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| JSA_RS04415 () | 875706..875990 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| JSA_RS04420 () | 876078..876647 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| JSA_RS04425 () | 876835..877023 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| JSA_RS04430 () | 877052..877312 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| JSA_RS04435 () | 877653..877856 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| JSA_RS04440 () | 877853..878089 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| JSA_RS04445 () | 878314..878895 | + | 582 | WP_001140693.1 | phosphoglycerate mutase family protein | - |
| JSA_RS04450 () | 878968..879585 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| JSA_RS04455 () | 879740..880234 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| JSA_RS04460 () | 880633..881055 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| JSA_RS04465 () | 881203..881919 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| JSA_RS04470 () | 882002..882541 | + | 540 | WP_000422908.1 | nitroreductase | - |
| JSA_RS04475 () | 882691..883011 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| JSA_RS04480 () | 883155..883511 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| JSA_RS04485 () | 883669..884049 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| JSA_RS04495 () | 884228..885106 | + | 879 | WP_000932216.1 | DUF1963 domain-containing protein | - |
| JSA_RS04500 () | 885848..886234 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| JSA_RS04505 () | 886227..886523 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| JSA_RS04510 () | 886773..887798 | + | 1026 | WP_000571218.1 | Methionine import ATP-binding protein MetN 2 | VF |
| JSA_RS04515 () | 887791..888486 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
| JSA_RS04520 () | 888504..889325 | + | 822 | WP_000732326.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| JSA_RS04525 () | 889679..889873 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| JSA_RS04530 () | 890106..890957 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
| JSA_RS04535 () | 891285..892046 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|