MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 105802 bp
Accession: NZ_AP014839 Location: 5301494..5407295 Organism: Pseudomonas aeruginosa strain 8380 Replicon: chromosome
Accession: NZ_AP014839 Location: 5301494..5407295 Organism: Pseudomonas aeruginosa strain 8380 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA8380_RS24535 () | 5297012..5301265 | + | 4254 | WP_060852929.1 | two-partner secretion system exoprotein TpsA4 | - |
| PA8380_RS24545 () | 5301631..5302491 | + | 861 | WP_003158180.1 | ParA family protein | - |
| PA8380_RS24550 () | 5302493..5303218 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| PA8380_RS24555 () | 5303215..5303712 | + | 498 | WP_003103852.1 | hypothetical protein | - |
| PA8380_RS24560 () | 5303718..5304464 | + | 747 | WP_003159720.1 | hypothetical protein | - |
| PA8380_RS24565 () | 5304461..5305147 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| PA8380_RS24570 () | 5305147..5305848 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| PA8380_RS24575 () | 5305845..5306552 | + | 708 | WP_003103848.1 | HNH endonuclease | - |
| PA8380_RS24580 () | 5306536..5306754 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| PA8380_RS24585 () | 5306751..5308094 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| PA8380_RS32155 () | 5308533..5308979 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| PA8380_RS24595 () | 5309157..5309342 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| PA8380_RS24600 () | 5309332..5309859 | + | 528 | WP_003103844.1 | hypothetical protein | - |
| PA8380_RS24605 () | 5309856..5310113 | + | 258 | WP_003103843.1 | hypothetical protein | - |
| PA8380_RS31930 () | 5310106..5310603 | + | 498 | WP_003125258.1 | hypothetical protein | - |
| PA8380_RS24615 () | 5310596..5310829 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| PA8380_RS24620 () | 5310829..5311845 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| PA8380_RS24625 () | 5311848..5312096 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| PA8380_RS24630 () | 5312093..5313826 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| PA8380_RS24635 () | 5313854..5314609 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| PA8380_RS31530 () | 5314612..5315937 | + | 1326 | WP_071534719.1 | hypothetical protein | - |
| PA8380_RS24645 () | 5316907..5317104 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| PA8380_RS24650 () | 5317260..5317988 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| PA8380_RS24655 () | 5317994..5318542 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| PA8380_RS24660 () | 5318589..5319428 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| PA8380_RS24665 () | 5319458..5319946 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| PA8380_RS24670 () | 5320054..5320299 | + | 246 | WP_023102333.1 | CrpP family protein | - |
| PA8380_RS24675 () | 5320365..5320583 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| PA8380_RS24685 () | 5320783..5321043 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| PA8380_RS24690 () | 5321065..5321475 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PA8380_RS24695 () | 5321475..5321705 | - | 231 | WP_003158175.1 | antitoxin | Antitoxin Detail |
| PA8380_RS24700 () | 5321961..5323880 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| PA8380_RS24705 () | 5324188..5324397 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| PA8380_RS24710 () | 5324618..5326507 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| PA8380_RS24715 () | 5326504..5328477 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| PA8380_RS24720 () | 5328599..5329381 | + | 783 | WP_015060166.1 | phage Gp37/Gp68 family protein | - |
| PA8380_RS31545 () | 5329414..5330667 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| PA8380_RS24725 () | 5330841..5331965 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| PA8380_RS24730 () | 5331965..5333674 | + | 1710 | WP_003099757.1 | Outer membrane lipoprotein BfpB | VF |
| PA8380_RS24735 () | 5333678..5335003 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| PA8380_RS24740 () | 5334993..5335526 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| PA8380_RS24745 () | 5335535..5337115 | + | 1581 | WP_015060168.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| PA8380_RS24750 () | 5337115..5338194 | + | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PA8380_RS24755 () | 5338216..5338746 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| PA8380_RS24760 () | 5338743..5339684 | + | 942 | WP_003109361.1 | Flp pilus assembly complex ATPase component TadA | - |
| PA8380_RS24765 () | 5339689..5341017 | + | 1329 | WP_003109362.1 | hypothetical protein | VF |
| PA8380_RS24770 () | 5341046..5341483 | + | 438 | WP_003109363.1 | hypothetical protein | VF |
| PA8380_RS24780 () | 5342405..5342794 | + | 390 | WP_003109365.1 | hypothetical protein | - |
| PA8380_RS24785 () | 5342867..5343046 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| PA8380_RS24790 () | 5343506..5343985 | + | 480 | WP_003109367.1 | DUF3577 domain-containing protein | - |
| PA8380_RS32160 () | 5344123..5344281 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| PA8380_RS24795 () | 5344355..5344552 | + | 198 | WP_003109369.1 | hypothetical protein | - |
| PA8380_RS24805 () | 5345038..5345745 | + | 708 | WP_003456317.1 | hypothetical protein | - |
| PA8380_RS24810 () | 5345981..5346331 | + | 351 | WP_003109371.1 | hypothetical protein | - |
| PA8380_RS24815 () | 5346388..5347179 | + | 792 | WP_003109372.1 | DUF3275 family protein | - |
| PA8380_RS24820 () | 5347282..5347644 | + | 363 | WP_003159706.1 | hypothetical protein | - |
| PA8380_RS24825 () | 5347712..5347966 | + | 255 | WP_003125295.1 | hypothetical protein | - |
| PA8380_RS24830 () | 5348058..5348663 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| PA8380_RS24835 () | 5348693..5350138 | + | 1446 | WP_003125297.1 | class I SAM-dependent methyltransferase | - |
| PA8380_RS24840 () | 5350243..5352492 | + | 2250 | WP_003159705.1 | DEAD/DEAH box helicase | - |
| PA8380_RS24845 () | 5352594..5352896 | - | 303 | WP_017002261.1 | hypothetical protein | - |
| PA8380_RS24850 () | 5353064..5354092 | + | 1029 | WP_023662037.1 | IS30 family transposase ISPsp4 | Transposase |
| PA8380_RS24855 () | 5354182..5354853 | - | 672 | WP_016561615.1 | DsbA family oxidoreductase | - |
| PA8380_RS24860 () | 5354906..5355247 | - | 342 | WP_003125308.1 | carboxymuconolactone decarboxylase family protein | - |
| PA8380_RS24865 () | 5355342..5355902 | - | 561 | WP_015060170.1 | HTH-type transcriptional regulator CymR | VF |
| PA8380_RS24870 () | 5355965..5356750 | - | 786 | WP_003125309.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| PA8380_RS24875 () | 5356906..5357319 | - | 414 | WP_015060171.1 | hypothetical protein | - |
| PA8380_RS24880 () | 5357312..5357872 | - | 561 | WP_003125311.1 | hypothetical protein | - |
| PA8380_RS24885 () | 5358444..5358716 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| PA8380_RS24890 () | 5358934..5359626 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| PA8380_RS24895 () | 5359637..5360392 | + | 756 | WP_003125319.1 | TIGR03759 family integrating conjugative element protein | - |
| PA8380_RS24900 () | 5360377..5360958 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| PA8380_RS24905 () | 5360955..5361455 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| PA8380_RS24910 () | 5361527..5361733 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| PA8380_RS24915 () | 5361737..5363968 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| PA8380_RS24920 () | 5363968..5364714 | + | 747 | WP_003159693.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PA8380_RS24925 () | 5364725..5365849 | + | 1125 | Protein_4976 | UvrD-helicase domain-containing protein | - |
| PA8380_RS24930 () | 5365906..5366934 | + | 1029 | WP_023662037.1 | IS30 family transposase ISPsp4 | Transposase |
| PA8380_RS24935 () | 5366965..5367321 | + | 357 | Protein_4978 | ATP-binding domain-containing protein | - |
| PA8380_RS32165 () | 5367453..5368562 | + | 1110 | WP_003125327.1 | hypothetical protein | - |
| PA8380_RS31550 () | 5368607..5368918 | - | 312 | WP_003109392.1 | DUF2845 domain-containing protein | - |
| PA8380_RS24945 () | 5369091..5369390 | + | 300 | WP_003125328.1 | hypothetical protein | - |
| PA8380_RS24950 () | 5369484..5369822 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| PA8380_RS24955 () | 5369819..5370058 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| PA8380_RS24960 () | 5370076..5370432 | + | 357 | WP_003159691.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PA8380_RS24965 () | 5370443..5370829 | + | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| PA8380_RS24970 () | 5370826..5371485 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| PA8380_RS24975 () | 5371482..5372366 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| PA8380_RS24980 () | 5372350..5373855 | + | 1506 | WP_003158154.1 | TIGR03752 family integrating conjugative element protein | - |
| PA8380_RS24985 () | 5373833..5374276 | + | 444 | WP_003125338.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PA8380_RS24990 () | 5374276..5377218 | + | 2943 | WP_015060177.1 | conjugative transfer ATPase | - |
| PA8380_RS24995 () | 5377215..5377499 | + | 285 | WP_003158152.1 | hypothetical protein | - |
| PA8380_RS25000 () | 5377496..5378152 | + | 657 | WP_003158151.1 | DsbA family protein | - |
| PA8380_RS25005 () | 5378149..5378367 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| PA8380_RS25010 () | 5378926..5380113 | + | 1188 | WP_003159689.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| PA8380_RS25015 () | 5380136..5380558 | + | 423 | WP_003125089.1 | DUF1641 domain-containing protein | - |
| PA8380_RS25020 () | 5380548..5381414 | + | 867 | WP_003158148.1 | methyltransferase domain-containing protein | - |
| PA8380_RS25025 () | 5381552..5381983 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| PA8380_RS25030 () | 5381983..5382921 | + | 939 | WP_003159688.1 | TIGR03756 family integrating conjugative element protein | - |
| PA8380_RS25035 () | 5382939..5384321 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| PA8380_RS25040 () | 5384321..5384668 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| PA8380_RS25045 () | 5384665..5386200 | + | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PA8380_RS25050 () | 5386230..5386583 | - | 354 | WP_003158143.1 | hypothetical protein | - |
| PA8380_RS25055 () | 5386702..5386974 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PA8380_RS25060 () | 5386978..5387328 | + | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PA8380_RS25065 () | 5387706..5396219 | - | 8514 | WP_003125103.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| PA8380_RS25070 () | 5396784..5397047 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| PA8380_RS25075 () | 5397061..5397285 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| PA8380_RS25080 () | 5397491..5398219 | + | 729 | WP_003125105.1 | Crp/Fnr family transcriptional regulator | - |
| PA8380_RS25085 () | 5398290..5398652 | + | 363 | WP_003125106.1 | hypothetical protein | - |
| PA8380_RS25090 () | 5398756..5399250 | + | 495 | WP_003158140.1 | hypothetical protein | - |
| PA8380_RS25095 () | 5399359..5401377 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| PA8380_RS25100 () | 5401533..5402726 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| PA8380_RS32170 () | 5403114..5403470 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| PA8380_RS32175 () | 5403531..5403683 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| PA8380_RS25105 () | 5403682..5405601 | + | 1920 | WP_003158138.1 | helicase/relaxase domain-containing protein | - |
| PA8380_RS25110 () | 5405598..5406881 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PA8380_RS25130 () | 5407733..5410297 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| PA8380_RS25135 () | 5410453..5411181 | - | 729 | WP_031630866.1 | peptidoglycan editing factor PgeF | - |
| PA8380_RS25140 () | 5411178..5412140 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|