MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 109027 bp
Accession: NZ_AP014651 Location: 5233625..5342651 Organism: Pseudomonas aeruginosa strain NCGM257 Replicon: chromosome
Accession: NZ_AP014651 Location: 5233625..5342651 Organism: Pseudomonas aeruginosa strain NCGM257 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA257_RS24765 () | 5229134..5229406 | + | 273 | WP_074241374.1 | cysteine-rich CWC family protein | - |
| PA257_RS24770 () | 5229406..5230098 | + | 693 | WP_003085458.1 | 16S rRNA pseudouridine(516) synthase | - |
| PA257_RS24775 () | 5230234..5231277 | + | 1044 | WP_003134392.1 | L,D-transpeptidase | - |
| PA257_RS24780 () | 5231357..5232094 | + | 738 | WP_003085453.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| PA257_RS24785 () | 5232546..5233448 | + | 903 | WP_003085447.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| PA257_RS24795 () | 5233894..5235822 | + | 1929 | WP_003158602.1 | Prophage integrase IntS ; Integrase | Integrase |
| PA257_RS24800 () | 5236374..5237129 | + | 756 | WP_003158603.1 | hypothetical protein | - |
| PA257_RS24805 () | 5237248..5237460 | + | 213 | WP_003158604.1 | AlpA family transcriptional regulator | - |
| PA257_RS24810 () | 5237503..5238378 | + | 876 | WP_003158605.1 | hypothetical protein | VF |
| PA257_RS24815 () | 5238362..5238610 | + | 249 | WP_003158606.1 | hypothetical protein | - |
| PA257_RS24820 () | 5238603..5240231 | + | 1629 | WP_003158607.1 | ParB family protein | - |
| PA257_RS24825 () | 5240247..5240807 | + | 561 | WP_003158608.1 | DUF2857 domain-containing protein | - |
| PA257_RS24830 () | 5240811..5242055 | + | 1245 | WP_003158609.1 | hypothetical protein | - |
| PA257_RS24835 () | 5242373..5243158 | + | 786 | WP_003158610.1 | TIGR03761 family integrating conjugative element protein | - |
| PA257_RS24840 () | 5243155..5243682 | + | 528 | WP_003158611.1 | DUF3158 family protein | - |
| PA257_RS24845 () | 5243756..5244196 | + | 441 | WP_003158612.1 | single-stranded DNA-binding protein | - |
| PA257_RS24850 () | 5244466..5246490 | + | 2025 | WP_003158613.1 | DNA topoisomerase III | - |
| PA257_RS24855 () | 5247015..5247260 | + | 246 | WP_003158614.1 | hypothetical protein | - |
| PA257_RS24860 () | 5247589..5247801 | + | 213 | WP_003158617.1 | hypothetical protein | - |
| PA257_RS24865 () | 5247823..5248215 | + | 393 | WP_003158618.1 | hypothetical protein | - |
| PA257_RS24870 () | 5248428..5249165 | + | 738 | WP_003158619.1 | hypothetical protein | - |
| PA257_RS24875 () | 5249260..5249538 | + | 279 | WP_003158620.1 | hypothetical protein | - |
| PA257_RS24880 () | 5249818..5250630 | + | 813 | WP_003158621.1 | hypothetical protein | - |
| PA257_RS24885 () | 5251007..5251921 | + | 915 | WP_003158622.1 | DUF3577 domain-containing protein | - |
| PA257_RS24890 () | 5251976..5252674 | + | 699 | WP_003158623.1 | DUF3275 family protein | - |
| PA257_RS24895 () | 5252769..5253170 | + | 402 | WP_003158624.1 | hypothetical protein | - |
| PA257_RS24900 () | 5253253..5253903 | + | 651 | WP_003158625.1 | hypothetical protein | - |
| PA257_RS24905 () | 5253968..5255089 | + | 1122 | WP_003158626.1 | O-methyltransferase | - |
| PA257_RS24910 () | 5255190..5255501 | + | 312 | WP_003158627.1 | hypothetical protein | - |
| PA257_RS24915 () | 5255639..5257918 | + | 2280 | WP_003158628.1 | DEAD/DEAH box helicase | - |
| PA257_RS24920 () | 5258152..5258730 | + | 579 | WP_003158629.1 | hypothetical protein | VF |
| PA257_RS24925 () | 5258727..5259368 | + | 642 | WP_003158630.1 | hypothetical protein | - |
| PA257_RS24930 () | 5259383..5260120 | + | 738 | WP_003158631.1 | TIGR03759 family integrating conjugative element protein | - |
| PA257_RS24935 () | 5260102..5260707 | + | 606 | WP_003158632.1 | transglycosylase SLT domain-containing protein | - |
| PA257_RS24940 () | 5260704..5261252 | + | 549 | WP_003158633.1 | integrating conjugative element protein | - |
| PA257_RS24945 () | 5261257..5263443 | + | 2187 | WP_003158634.1 | type IV conjugative transfer system coupling protein TraD | - |
| PA257_RS24950 () | 5263440..5264189 | + | 750 | WP_003158635.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PA257_RS24955 () | 5264190..5265560 | - | 1371 | WP_003158636.1 | hypothetical protein | - |
| PA257_RS24960 () | 5265722..5266102 | + | 381 | WP_003158637.1 | RAQPRD family integrative conjugative element protein | - |
| PA257_RS24965 () | 5266099..5266332 | + | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| PA257_RS24970 () | 5266349..5266708 | + | 360 | WP_003158638.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PA257_RS24975 () | 5266721..5267131 | + | 411 | WP_003158639.1 | TIGR03750 family conjugal transfer protein | - |
| PA257_RS24980 () | 5267128..5267817 | + | 690 | WP_003158640.1 | TIGR03746 family integrating conjugative element protein | - |
| PA257_RS24985 () | 5267814..5268746 | + | 933 | WP_003158641.1 | TIGR03749 family integrating conjugative element protein | - |
| PA257_RS24990 () | 5268736..5270154 | + | 1419 | WP_003158643.1 | TIGR03752 family integrating conjugative element protein | - |
| PA257_RS24995 () | 5270135..5270575 | + | 441 | WP_003158644.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PA257_RS25000 () | 5270575..5273445 | + | 2871 | WP_003158645.1 | conjugative transfer ATPase | - |
| PA257_RS25005 () | 5273461..5274213 | + | 753 | WP_031299380.1 | DsbA family protein | - |
| PA257_RS25010 () | 5274400..5274894 | + | 495 | WP_003158647.1 | DNA repair protein RadC | - |
| PA257_RS25015 () | 5275038..5275484 | + | 447 | WP_003158648.1 | TIGR03757 family integrating conjugative element protein | - |
| PA257_RS25020 () | 5275481..5276428 | + | 948 | WP_003158649.1 | TIGR03756 family integrating conjugative element protein | - |
| PA257_RS25025 () | 5276439..5277833 | + | 1395 | WP_003158650.1 | integrating conjugative element protein | - |
| PA257_RS25030 () | 5277830..5278189 | + | 360 | WP_003158651.1 | hypothetical protein | - |
| PA257_RS25035 () | 5278205..5279728 | + | 1524 | WP_003158652.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PA257_RS25040 () | 5279735..5280097 | - | 363 | WP_003158653.1 | DUF3742 family protein | - |
| PA257_RS25045 () | 5280125..5280583 | - | 459 | WP_003158654.1 | type II toxin-antitoxin system YhaV family toxin | - |
| PA257_RS25050 () | 5280583..5280900 | - | 318 | WP_003158655.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| PA257_RS25055 () | 5281212..5283074 | + | 1863 | WP_003158656.1 | TraI domain-containing protein | - |
| PA257_RS25060 () | 5283085..5283819 | - | 735 | Protein_5004 | DUF2130 domain-containing protein | - |
| PA257_RS34580 () | 5283852..5284052 | - | 201 | WP_003159550.1 | Tn3 family transposase | - |
| PA257_RS25065 () | 5284235..5287150 | - | 2916 | WP_003158660.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| PA257_RS25070 () | 5287296..5290028 | - | 2733 | Protein_5007 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| PA257_RS25075 () | 5290031..5290591 | - | 561 | WP_003124096.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| PA257_RS35600 () | 5290722..5290925 | - | 204 | WP_033865223.1 | DUF3330 domain-containing protein | - |
| PA257_RS25080 () | 5291116..5292129 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| PA257_RS34590 () | 5292282..5293022 | + | 741 | WP_003159548.1 | Metallo-beta-lactamase type 2 | ARG |
| PA257_RS25085 () | 5293155..5293688 | + | 534 | WP_000381802.1 | aminoglycoside nucleotidyltransferase ANT(2'')-Ia | - |
| PA257_RS34595 () | 5293845..5294192 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| PA257_RS25090 () | 5294186..5295157 | + | 972 | WP_000259026.1 | dihydropteroate synthase | - |
| PA257_RS25095 () | 5295374..5296588 | + | 1215 | WP_000214125.1 | Inner membrane transport protein YdhC | ARG |
| PA257_RS35605 () | 5296682..5296798 | + | 117 | Protein_5016 | DUF3363 domain-containing protein | - |
| PA257_RS25105 () | 5296795..5297421 | - | 627 | WP_000163574.1 | tetracycline resistance transcriptional repressor TetR(G) | - |
| PA257_RS25110 () | 5297525..5298700 | + | 1176 | WP_001257840.1 | Tetracycline resistance protein, class C | ARG |
| PA257_RS34600 () | 5298721..5299512 | + | 792 | WP_001253717.1 | LysR family transcriptional regulator | - |
| PA257_RS25120 () | 5299604..5301136 | - | 1533 | WP_001747814.1 | IS91 family transposase ISVsa3 | Transposase |
| PA257_RS35195 () | 5301363..5301824 | - | 462 | WP_074424383.1 | 60 kDa chaperonin | VF |
| PA257_RS25130 () | 5302118..5302969 | + | 852 | WP_000946487.1 | Dihydropteroate synthase | ARG |
| PA257_RS25135 () | 5303097..5303303 | + | 207 | WP_033896018.1 | hypothetical protein | - |
| PA257_RS25140 () | 5303343..5304107 | + | 765 | WP_023464298.1 | IS6 family transposase IS6100 | Transposase |
| PA257_RS25145 () | 5304328..5305116 | - | 789 | Protein_5025 | putative signaling protein | VF |
| PA257_RS25150 () | 5305113..5305349 | - | 237 | WP_003132004.1 | broad-spectrum mercury transporter MerE | - |
| PA257_RS25155 () | 5305346..5305711 | - | 366 | WP_000995360.1 | mercury resistance co-regulator MerD | - |
| PA257_RS25160 () | 5305729..5307414 | - | 1686 | WP_003158917.1 | mercury(II) reductase | - |
| PA257_RS25165 () | 5307486..5307761 | - | 276 | WP_003131987.1 | mercury resistance system periplasmic binding protein MerP | - |
| PA257_RS25170 () | 5307774..5308124 | - | 351 | WP_003131974.1 | mercuric ion transporter MerT | - |
| PA257_RS25175 () | 5308196..5308630 | + | 435 | WP_003131969.1 | mercury resistance transcriptional regulator MerR | - |
| PA257_RS25180 () | 5308637..5309344 | - | 708 | WP_003158916.1 | DUF2130 domain-containing protein | - |
| PA257_RS25185 () | 5309347..5311227 | - | 1881 | WP_003158915.1 | ATP-dependent endonuclease | - |
| PA257_RS25190 () | 5311284..5314289 | - | 3006 | WP_003160810.1 | DEAD/DEAH box helicase family protein | - |
| PA257_RS25195 () | 5314302..5316458 | - | 2157 | WP_003158913.1 | site-specific DNA-methyltransferase | - |
| PA257_RS25200 () | 5316458..5318581 | - | 2124 | WP_003158912.1 | DUF262 domain-containing protein | - |
| PA257_RS25205 () | 5318591..5319397 | - | 807 | WP_003158911.1 | DUF4391 domain-containing protein | - |
| PA257_RS25210 () | 5319394..5322615 | - | 3222 | WP_003160812.1 | DEAD/DEAH box helicase family protein | - |
| PA257_RS25215 () | 5322628..5323536 | - | 909 | WP_003158909.1 | WYL domain-containing protein | - |
| PA257_RS25220 () | 5323816..5324706 | + | 891 | WP_003158908.1 | Hca operon transcriptional activator HcaR | VF |
| PA257_RS25225 () | 5324841..5325158 | + | 318 | WP_023464296.1 | helix-turn-helix domain-containing protein | - |
| PA257_RS25230 () | 5325151..5326182 | + | 1032 | WP_003158906.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| PA257_RS25235 () | 5326160..5328670 | + | 2511 | WP_003160813.1 | S8 family peptidase | - |
| PA257_RS25240 () | 5328769..5329074 | - | 306 | WP_003158903.1 | helix-turn-helix domain-containing protein | - |
| PA257_RS25245 () | 5329196..5329837 | + | 642 | WP_003158902.1 | substrate-binding domain-containing protein | - |
| PA257_RS25250 () | 5330125..5330472 | - | 348 | WP_019486378.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PA257_RS25255 () | 5330482..5330733 | - | 252 | WP_003114155.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PA257_RS25260 () | 5330947..5331930 | - | 984 | WP_033990852.1 | IS91 family transposase ISCARN110 | Transposase |
| PA257_RS25265 () | 5331930..5333222 | - | 1293 | WP_033990854.1 | hypothetical protein | - |
| PA257_RS25270 () | 5333452..5334726 | - | 1275 | WP_033990855.1 | Zona occludens toxin | VF |
| PA257_RS25275 () | 5334730..5335086 | - | 357 | WP_003114150.1 | DUF2523 domain-containing protein | - |
| PA257_RS25280 () | 5335091..5336365 | - | 1275 | WP_074241366.1 | attachment protein | - |
| PA257_RS25285 () | 5336513..5336761 | - | 249 | WP_033990857.1 | phage coat protein B | - |
| PA257_RS25290 () | 5336774..5337025 | - | 252 | WP_033964688.1 | hypothetical protein | - |
| PA257_RS25300 () | 5337147..5337581 | - | 435 | WP_003140508.1 | hypothetical protein | - |
| PA257_RS35615 () | 5338096..5338383 | - | 288 | WP_052150385.1 | DUF5447 family protein | - |
| PA257_RS35620 () | 5338610..5338759 | - | 150 | Protein_5057 | Arc family DNA-binding protein | - |
| PA257_RS34630 () | 5338756..5338971 | - | 216 | WP_016852068.1 | hypothetical protein | - |
| PA257_RS35210 () | 5339427..5340224 | + | 798 | WP_125093622.1 | hypothetical protein | - |
| PA257_RS35215 () | 5340221..5340949 | + | 729 | WP_126071378.1 | hypothetical protein | - |
| PA257_RS34640 () | 5340970..5341740 | + | 771 | WP_071534860.1 | hypothetical protein | - |
| PA257_RS35220 () | 5341997..5342464 | + | 468 | WP_125093624.1 | hypothetical protein | - |
| PA257_RS25315 () | 5342788..5343264 | - | 477 | WP_003085438.1 | hypothetical protein | - |
| PA257_RS25320 () | 5343496..5343789 | - | 294 | WP_003085435.1 | DUF2845 domain-containing protein | - |
| PA257_RS25325 () | 5344129..5344386 | + | 258 | WP_003085431.1 | YjhX family toxin | - |
| PA257_RS25330 () | 5344446..5344952 | + | 507 | WP_023096064.1 | N-acetyltransferase | - |
| PA257_RS25335 () | 5344996..5345391 | - | 396 | WP_019485089.1 | lactoylglutathione lyase | - |
| PA257_RS25340 () | 5345436..5345732 | - | 297 | WP_003085421.1 | antibiotic biosynthesis monooxygenase | - |
| PA257_RS25345 () | 5345848..5346702 | + | 855 | WP_014603585.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|