MGE detailed information
MGE type: Prophage MGE length: 92245 bp
Accession: NZ_AP014623 Location: 2080728..2172972 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain StFRB508 Replicon: chromosome
Accession: NZ_AP014623 Location: 2080728..2172972 Organism: Pseudomonas chlororaphis subsp. aurantiaca strain StFRB508 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCAU_RS09495 () | 2075990..2076541 | + | 552 | WP_169914426.1 | translation initiation factor IF-3 | - |
| PCAU_RS09500 () | 2076602..2076796 | + | 195 | WP_002553160.1 | 50S ribosomal protein L35 | - |
| PCAU_RS09505 () | 2076827..2077183 | + | 357 | WP_007905879.1 | 50S ribosomal protein L20 | - |
| PCAU_RS09510 () | 2077293..2078309 | + | 1017 | WP_007920512.1 | phenylalanine--tRNA ligase subunit alpha | - |
| PCAU_RS09515 () | 2078346..2080724 | + | 2379 | WP_096373540.1 | phenylalanine--tRNA ligase subunit beta | - |
| PCAU_RS09520 () | 2080728..2081030 | + | 303 | WP_002553164.1 | integration host factor subunit alpha | - |
| PCAU_RS09525 () | 2081011..2081367 | + | 357 | WP_007920509.1 | MerR family transcriptional regulator | - |
| PCAU_RS09535 () | 2081810..2082127 | - | 318 | WP_096373541.1 | hypothetical protein | - |
| PCAU_RS32365 () | 2082130..2083314 | - | 1185 | WP_197706517.1 | hypothetical protein | - |
| PCAU_RS09545 () | 2083315..2083890 | - | 576 | WP_096373542.1 | YmfQ family protein | - |
| PCAU_RS09550 () | 2083887..2084957 | - | 1071 | WP_096373543.1 | baseplate J/gp47 family protein | - |
| PCAU_RS09555 () | 2084959..2085309 | - | 351 | WP_096373544.1 | phage GP46 family protein | - |
| PCAU_RS09560 () | 2085382..2085942 | - | 561 | WP_096373545.1 | phage baseplate assembly protein | - |
| PCAU_RS09565 () | 2085942..2087042 | - | 1101 | WP_096375969.1 | phage tail protein | - |
| PCAU_RS09570 () | 2087059..2088429 | - | 1371 | WP_096373546.1 | DNA circularization N-terminal domain-containing protein | - |
| PCAU_RS09575 () | 2088426..2090819 | - | 2394 | WP_096373547.1 | phage tail tape measure protein | - |
| PCAU_RS09580 () | 2090987..2091391 | - | 405 | WP_096373548.1 | hypothetical protein | - |
| PCAU_RS09585 () | 2091396..2091767 | - | 372 | WP_096373549.1 | phage tail protein | - |
| PCAU_RS09590 () | 2091781..2092878 | - | 1098 | WP_096373550.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| PCAU_RS09595 () | 2092875..2093066 | - | 192 | WP_096373551.1 | DUF2635 domain-containing protein | - |
| PCAU_RS09600 () | 2093066..2093617 | - | 552 | WP_096373552.1 | DUF1834 family protein | - |
| PCAU_RS09605 () | 2093617..2094105 | - | 489 | WP_096373553.1 | DUF1320 family protein | - |
| PCAU_RS09610 () | 2094102..2094632 | - | 531 | WP_096373554.1 | hypothetical protein | - |
| PCAU_RS09615 () | 2094642..2095547 | - | 906 | WP_096373555.1 | Mu-like prophage major head subunit gpT family protein | - |
| PCAU_RS09620 () | 2095575..2095970 | - | 396 | WP_096373556.1 | hypothetical protein | - |
| PCAU_RS09625 () | 2095974..2096954 | - | 981 | WP_096373557.1 | hypothetical protein | - |
| PCAU_RS31960 () | 2097275..2097742 | - | 468 | WP_157756440.1 | hypothetical protein | - |
| PCAU_RS09635 () | 2097983..2098546 | - | 564 | WP_096373559.1 | phage virion morphogenesis protein | - |
| PCAU_RS09640 () | 2098555..2099817 | - | 1263 | WP_096373560.1 | hypothetical protein | - |
| PCAU_RS09645 () | 2099817..2099975 | - | 159 | WP_157756442.1 | hypothetical protein | - |
| PCAU_RS09650 () | 2100022..2101578 | - | 1557 | WP_096373562.1 | DUF935 domain-containing protein | - |
| PCAU_RS09655 () | 2101578..2103140 | - | 1563 | WP_096373563.1 | hypothetical protein | - |
| PCAU_RS09660 () | 2103137..2103451 | - | 315 | WP_096373564.1 | hypothetical protein | - |
| PCAU_RS09665 () | 2103448..2103963 | - | 516 | WP_096373565.1 | DUF3486 family protein | - |
| PCAU_RS09670 () | 2103967..2104278 | - | 312 | WP_096373566.1 | hypothetical protein | - |
| PCAU_RS09675 () | 2104275..2104607 | - | 333 | WP_096373567.1 | hypothetical protein | - |
| PCAU_RS09680 () | 2104604..2104825 | - | 222 | WP_096373568.1 | TraR/DksA C4-type zinc finger protein | - |
| PCAU_RS09685 () | 2104812..2105435 | - | 624 | WP_096373569.1 | DNA-packaging protein | - |
| PCAU_RS09690 () | 2105432..2106028 | - | 597 | WP_096375970.1 | transglycosylase SLT domain-containing protein | - |
| PCAU_RS09695 () | 2106067..2106318 | - | 252 | WP_082061053.1 | hypothetical protein | - |
| PCAU_RS31965 () | 2106354..2106695 | - | 342 | WP_157756444.1 | hypothetical protein | - |
| PCAU_RS09705 () | 2106814..2107296 | - | 483 | WP_157756446.1 | hypothetical protein | - |
| PCAU_RS09710 () | 2107311..2107748 | - | 438 | WP_096373572.1 | transcriptional regulator | - |
| PCAU_RS09715 () | 2107745..2108161 | - | 417 | WP_096373573.1 | regulatory protein GemA | - |
| PCAU_RS09720 () | 2108158..2108451 | - | 294 | WP_172900844.1 | hypothetical protein | - |
| PCAU_RS09730 () | 2108507..2108944 | - | 438 | WP_096373575.1 | hypothetical protein | - |
| PCAU_RS09740 () | 2109019..2109231 | - | 213 | WP_044462082.1 | hypothetical protein | - |
| PCAU_RS09745 () | 2109259..2109528 | - | 270 | WP_172900896.1 | host nuclease inhibitor protein | - |
| PCAU_RS09750 () | 2109764..2109994 | - | 231 | WP_096373576.1 | hypothetical protein | - |
| PCAU_RS09755 () | 2109996..2110208 | - | 213 | WP_096373577.1 | hypothetical protein | - |
| PCAU_RS09760 () | 2110210..2110830 | - | 621 | WP_096373578.1 | DUF3164 family protein | - |
| PCAU_RS31970 () | 2110835..2111026 | - | 192 | WP_157756448.1 | hypothetical protein | - |
| PCAU_RS09765 () | 2111037..2111324 | - | 288 | WP_197706526.1 | hypothetical protein | - |
| PCAU_RS09770 () | 2111344..2111724 | - | 381 | WP_096373580.1 | hypothetical protein | - |
| PCAU_RS09775 () | 2111721..2112332 | - | 612 | WP_096373581.1 | helix-turn-helix domain-containing protein | - |
| PCAU_RS09780 () | 2112332..2113054 | - | 723 | WP_096373582.1 | ATP-binding protein | - |
| PCAU_RS09785 () | 2113076..2115127 | - | 2052 | WP_096373583.1 | hypothetical protein ; Integrase | Integrase |
| PCAU_RS09790 () | 2115120..2115563 | - | 444 | WP_096373584.1 | hypothetical protein | - |
| PCAU_RS09795 () | 2115566..2115904 | - | 339 | WP_096375971.1 | helix-turn-helix domain-containing protein | - |
| PCAU_RS09800 () | 2116073..2116777 | + | 705 | WP_096373585.1 | helix-turn-helix transcriptional regulator | - |
| PCAU_RS09805 () | 2116999..2118090 | - | 1092 | Protein_1919 | hypothetical protein ; Integrase | Integrase |
| PCAU_RS09820 () | 2119490..2119699 | + | 210 | WP_096373586.1 | hypothetical protein | - |
| PCAU_RS09825 () | 2119737..2119967 | + | 231 | WP_096373587.1 | hypothetical protein | - |
| PCAU_RS09830 () | 2120212..2120523 | + | 312 | WP_096373588.1 | hypothetical protein | - |
| PCAU_RS09835 () | 2120551..2120724 | + | 174 | WP_172900845.1 | hypothetical protein | - |
| PCAU_RS09840 () | 2120885..2121736 | + | 852 | WP_096373589.1 | hypothetical protein | - |
| PCAU_RS31975 () | 2122557..2123198 | - | 642 | WP_157756450.1 | hypothetical protein | - |
| PCAU_RS09850 () | 2123507..2124736 | - | 1230 | WP_096373591.1 | hypothetical protein | - |
| PCAU_RS09855 () | 2124890..2125195 | - | 306 | WP_096373592.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| PCAU_RS09860 () | 2125205..2125483 | - | 279 | WP_096373593.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PCAU_RS09865 () | 2125609..2125890 | - | 282 | WP_157756452.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| PCAU_RS31980 () | 2126240..2127133 | + | 894 | WP_157756453.1 | hypothetical protein | - |
| PCAU_RS09870 () | 2127358..2127723 | - | 366 | WP_096373595.1 | Arc family DNA-binding protein | - |
| PCAU_RS32235 () | 2127863..2128009 | + | 147 | WP_172900835.1 | hypothetical protein | - |
| PCAU_RS09875 () | 2128077..2128385 | + | 309 | WP_096373596.1 | DUF3077 domain-containing protein | - |
| PCAU_RS09880 () | 2128385..2129176 | + | 792 | WP_096373597.1 | phage antirepressor KilAC domain-containing protein | - |
| PCAU_RS09885 () | 2129598..2130143 | + | 546 | WP_096373598.1 | hypothetical protein | - |
| PCAU_RS09890 () | 2130147..2130587 | + | 441 | WP_096373599.1 | type II toxin-antitoxin system YafO family toxin | - |
| PCAU_RS09895 () | 2130694..2131113 | - | 420 | WP_172900897.1 | hypothetical protein | - |
| PCAU_RS09900 () | 2131218..2131463 | + | 246 | WP_096373601.1 | helix-turn-helix domain-containing protein | - |
| PCAU_RS09905 () | 2131588..2132010 | + | 423 | WP_096373602.1 | Rha family transcriptional regulator | - |
| PCAU_RS09910 () | 2132347..2132619 | + | 273 | WP_096373603.1 | hypothetical protein | - |
| PCAU_RS09915 () | 2132616..2132879 | + | 264 | WP_096373604.1 | hypothetical protein | - |
| PCAU_RS09930 () | 2133427..2134200 | + | 774 | WP_096373606.1 | hypothetical protein | - |
| PCAU_RS09935 () | 2134181..2134987 | + | 807 | WP_096373607.1 | IS21 family transposase ISKol1 | Transposase |
| PCAU_RS09940 () | 2134984..2136345 | + | 1362 | WP_096373608.1 | replicative DNA helicase | - |
| PCAU_RS09945 () | 2136363..2136632 | + | 270 | WP_096373609.1 | hypothetical protein | - |
| PCAU_RS09950 () | 2136629..2137012 | + | 384 | WP_096373610.1 | antitermination protein Q | - |
| PCAU_RS31985 () | 2137125..2137736 | - | 612 | WP_157756454.1 | hypothetical protein | - |
| PCAU_RS09955 () | 2137937..2138482 | + | 546 | WP_096373611.1 | hypothetical protein | - |
| PCAU_RS09960 () | 2138584..2138835 | - | 252 | WP_096373612.1 | hypothetical protein | - |
| PCAU_RS31990 () | 2138942..2139145 | + | 204 | WP_157756455.1 | hypothetical protein | - |
| PCAU_RS09965 () | 2139371..2140228 | + | 858 | WP_096373613.1 | putidacin L1 family lectin-like bacteriocin | - |
| PCAU_RS09970 () | 2140401..2141003 | + | 603 | WP_096373614.1 | hypothetical protein | - |
| PCAU_RS09975 () | 2141097..2141420 | + | 324 | WP_096373615.1 | peptidase M48, Ste24p | - |
| PCAU_RS09980 () | 2141422..2141694 | + | 273 | WP_096373616.1 | hypothetical protein | - |
| PCAU_RS09985 () | 2141699..2141995 | + | 297 | WP_096373617.1 | hypothetical protein | - |
| PCAU_RS09990 () | 2142056..2142343 | + | 288 | WP_096373618.1 | hypothetical protein | - |
| PCAU_RS09995 () | 2142340..2142531 | + | 192 | WP_096373619.1 | hypothetical protein | - |
| PCAU_RS10000 () | 2142562..2142765 | - | 204 | WP_172900898.1 | hypothetical protein | - |
| PCAU_RS10005 () | 2142852..2143466 | + | 615 | WP_096373621.1 | hypothetical protein | - |
| PCAU_RS10010 () | 2143498..2143959 | + | 462 | WP_096373622.1 | DUF2280 domain-containing protein | - |
| PCAU_RS10015 () | 2143946..2145246 | + | 1301 | Protein_1961 | terminase | - |
| PCAU_RS10020 () | 2145243..2146661 | + | 1419 | WP_096373623.1 | DUF4055 domain-containing protein | - |
| PCAU_RS10025 () | 2146636..2147724 | + | 1089 | WP_096373624.1 | minor capsid protein | - |
| PCAU_RS10030 () | 2147740..2148315 | - | 576 | WP_096373625.1 | hypothetical protein | - |
| PCAU_RS10035 () | 2148475..2149203 | + | 729 | WP_096373626.1 | hypothetical protein | - |
| PCAU_RS10040 () | 2149216..2150178 | + | 963 | WP_096373627.1 | Ig domain-containing protein | - |
| PCAU_RS10045 () | 2150224..2150817 | + | 594 | WP_096373628.1 | hypothetical protein | - |
| PCAU_RS10050 () | 2150874..2151377 | + | 504 | WP_096373629.1 | hypothetical protein | - |
| PCAU_RS10055 () | 2151394..2151752 | + | 359 | Protein_1969 | hypothetical protein | - |
| PCAU_RS10060 () | 2151749..2152345 | + | 597 | WP_096373630.1 | hypothetical protein | - |
| PCAU_RS10065 () | 2152342..2152758 | + | 417 | WP_096373631.1 | DUF4128 domain-containing protein | - |
| PCAU_RS31995 () | 2152822..2153637 | + | 816 | WP_157756456.1 | hypothetical protein | - |
| PCAU_RS10070 () | 2153737..2154390 | + | 654 | WP_096373632.1 | phage tail protein | - |
| PCAU_RS10075 () | 2154400..2154783 | + | 384 | WP_028682498.1 | phage tail assembly chaperone | - |
| PCAU_RS10080 () | 2154846..2155106 | + | 261 | WP_096373633.1 | DUF1799 domain-containing protein | - |
| PCAU_RS10085 () | 2155134..2158142 | + | 3009 | WP_096373634.1 | phage tail tape measure protein | - |
| PCAU_RS10090 () | 2158142..2158480 | + | 339 | WP_096373635.1 | phage tail protein | - |
| PCAU_RS10095 () | 2158490..2159239 | + | 750 | WP_096373636.1 | phage minor tail protein L | - |
| PCAU_RS10100 () | 2159242..2159997 | + | 756 | WP_096373637.1 | C40 family peptidase | - |
| PCAU_RS32000 () | 2160002..2160655 | - | 654 | WP_157756457.1 | hypothetical protein | - |
| PCAU_RS32005 () | 2160943..2161290 | + | 348 | WP_157756458.1 | hypothetical protein | - |
| PCAU_RS10110 () | 2161334..2161942 | + | 609 | WP_096373639.1 | tail assembly protein | - |
| PCAU_RS32010 () | 2161993..2162466 | + | 474 | WP_157756459.1 | hypothetical protein | - |
| PCAU_RS10115 () | 2162523..2165981 | + | 3459 | WP_096373640.1 | phage tail protein | - |
| PCAU_RS10120 () | 2165990..2166301 | + | 312 | WP_096375972.1 | hypothetical protein | - |
| PCAU_RS10125 () | 2166301..2166981 | + | 681 | WP_096373641.1 | hypothetical protein | - |
| PCAU_RS10130 () | 2167045..2168217 | + | 1173 | WP_157756460.1 | hypothetical protein | - |
| PCAU_RS10135 () | 2168261..2168686 | + | 426 | WP_096373643.1 | cell wall hydrolase | - |
| PCAU_RS10140 () | 2168686..2169057 | + | 372 | WP_096373644.1 | hypothetical protein | - |
| PCAU_RS10145 () | 2169054..2169311 | + | 258 | WP_096373645.1 | hypothetical protein | - |
| PCAU_RS32015 () | 2169355..2169699 | - | 345 | WP_124298938.1 | hypothetical protein | - |
| PCAU_RS10155 () | 2170081..2170587 | - | 507 | Protein_1992 | SOS response-associated peptidase family protein | - |
| PCAU_RS10160 () | 2170629..2170898 | + | 270 | WP_096373646.1 | DUF2514 family protein | - |
| PCAU_RS10165 () | 2171016..2172065 | + | 1050 | WP_157756461.1 | acyltransferase family protein | - |
| PCAU_RS10175 () | 2172265..2172972 | - | 708 | WP_096373648.1 | SOS response-associated peptidase family protein | - |
| PCAU_RS10185 () | 2174165..2174461 | + | 297 | WP_096373649.1 | hypothetical protein | - |
| PCAU_RS10190 () | 2174607..2175188 | - | 582 | WP_096373650.1 | hypothetical protein | - |
| PCAU_RS10195 () | 2175542..2176042 | + | 501 | WP_096373651.1 | GNAT family N-acetyltransferase | - |
| PCAU_RS10200 () | 2176466..2176846 | - | 381 | WP_096373652.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|