NZ_AP01456889753..294621

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 204869 bp
Accession: NZ_AP014568        Location: 89753..294621         Organism: Serpentinomonas raichei strain A1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
SRAA_RS00425 () 84950..85405 + 456 WP_045530249.1 YraN family protein -
SRAA_RS00430 () 85475..86143 + 669 WP_045530251.1 BON domain-containing protein -
SRAA_RS00435 () 86150..87052 - 903 WP_045530253.1 NAD(P)-dependent oxidoreductase -
SRAA_RS00440 () 87065..88201 - 1137 WP_045530255.1 PilT/PilU family type 4a pilus ATPase -
SRAA_RS00445 () 88236..89279 - 1044 WP_045530257.1 type IV pilus twitching motility protein PilT -
SRAA_RS00450 () 89313..90032 + 720 WP_045530259.1 YggS family pyridoxal phosphate-dependent enzyme -
SRAA_RS11970 () 90008..91462 - 1455 WP_052467419.1 PAS domain S-box protein -
SRAA_RS00460 () 91537..91950 - 414 WP_034109967.1 helix-turn-helix domain-containing protein -
SRAA_RS00465 () 91978..92271 - 294 WP_045530262.1 type II toxin-antitoxin system HigB family toxin -
SRAA_RS00470 () 92443..92865 - 423 WP_034109969.1 DUF86 domain-containing protein -
SRAA_RS00475 () 92850..93275 - 426 WP_045530265.1 nucleotidyltransferase domain-containing protein -
SRAA_RS00480 () 93302..94825 - 1524 WP_045530267.1 FAD-binding protein -
SRAA_RS00485 () 95026..95451 + 426 WP_045530269.1 Acid shock protein VF
SRAA_RS00490 () 95731..95967 + 237 WP_034109975.1 hypothetical protein -
SRAA_RS00495 () 96135..96725 + 591 WP_171820204.1 hypothetical protein -
SRAA_RS00500 () 96722..100294 + 3573 WP_052467420.1 YjbH domain-containing protein -
SRAA_RS00505 () 100713..102725 + 2013 WP_045532974.1 SLBB domain-containing protein -
SRAA_RS00510 () 102743..103936 + 1194 WP_045530275.1 LPS biosynthesis protein -
SRAA_RS00515 () 103965..104849 - 885 WP_045530277.1 LysR family transcriptional regulator -
SRAA_RS00520 () 104863..105288 - 426 WP_045530279.1 type II toxin-antitoxin system VapC family toxin -
SRAA_RS00525 () 105298..105552 - 255 WP_045530281.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
SRAA_RS00530 () 105593..106441 - 849 WP_045530283.1 formyltetrahydrofolate deformylase -
SRAA_RS00535 () 106589..107992 + 1404 WP_045530286.1 Bifunctional protein GlmU VF
SRAA_RS00540 () 108021..108752 - 732 WP_045530288.1 hypothetical protein -
SRAA_RS00545 () 108724..108951 - 228 WP_045530292.1 hypothetical protein -
SRAA_RS00550 () 108955..109413 - 459 WP_045530293.1 SH3 domain-containing protein -
SRAA_RS00555 () 109579..111492 + 1914 WP_045530295.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -
SRAA_RS00560 () 111742..113316 + 1575 WP_045530297.1 Aerotaxis receptor VF
SRAA_RS00565 () 113430..113657 - 228 WP_045530301.1 addiction module protein -
SRAA_RS00570 () 113970..115637 + 1668 WP_082039820.1 Aerotaxis receptor VF
SRAA_RS00575 () 115824..118586 + 2763 WP_045530303.1 preprotein translocase subunit SecA -
SRAA_RS00580 () 118608..119837 + 1230 WP_045530305.1 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ -
SRAA_RS00585 () 119856..120770 + 915 WP_045530307.1 ATP-binding protein -
SRAA_RS00590 () 120767..121249 + 483 WP_045530308.1 (deoxy)nucleoside triphosphate pyrophosphohydrolase -
SRAA_RS00595 () 121214..121969 - 756 WP_045530310.1 cell division protein ZapD -
SRAA_RS00600 () 121977..122615 - 639 WP_045530312.1 dephospho-CoA kinase -
SRAA_RS00605 () 122636..123514 - 879 WP_045530314.1 Type 4 prepilin-like proteins leader peptide-processing enzyme VF
SRAA_RS00610 () 123741..125705 - 1965 WP_045530316.1 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase VF
SRAA_RS00615 () 125686..126906 - 1221 WP_045530318.1 GDP-perosamine synthase VF
SRAA_RS00620 () 126926..127582 - 657 WP_029462911.1 GDP-perosamine N-acetyltransferase VF
SRAA_RS00625 () 127651..128055 - 405 WP_029462912.1 type II toxin-antitoxin system VapC family toxin -
SRAA_RS00630 () 128065..128316 - 252 WP_029462913.1 AbrB family transcriptional regulator -
SRAA_RS00635 () 128361..128969 - 609 WP_029462914.1 putative sugar transferase EpsL VF
SRAA_RS00640 () 128975..130195 - 1221 WP_197537868.1 hypothetical protein VF
SRAA_RS00645 () 130216..131352 - 1137 WP_029462916.1 UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase VF
SRAA_RS00650 () 131618..132064 - 447 WP_029462917.1 type II toxin-antitoxin system VapC family toxin -
SRAA_RS12125 () 132061..132312 - 252 WP_082039821.1 pantothenate metabolism flavoprotein -
SRAA_RS00655 () 132391..133524 - 1134 WP_045530320.1 UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase VF
SRAA_RS00660 () 133529..134557 - 1029 WP_045530322.1 UDP-glucose 4-epimerase VF
SRAA_RS12370 () 134599..135555 - 957 WP_144318670.1 hypothetical protein -
SRAA_RS12130 () 135583..136914 - 1332 WP_082039822.1 glycosyltransferase -
SRAA_RS00665 () 136877..138007 - 1131 WP_045530324.1 dTDP-4-amino-4,6-dideoxygalactose transaminase VF
SRAA_RS00670 () 138004..138636 - 633 WP_197538511.1 GNAT family N-acetyltransferase -
SRAA_RS00675 () 138783..139754 + 972 WP_045530331.1 IS481 family transposase ISVei2 Transposase
SRAA_RS00680 () 139855..141657 - 1803 WP_082039823.1 ABC transporter ATP-binding protein/permease -
SRAA_RS00685 () 141828..142019 - 192 WP_045530333.1 hypothetical protein -
SRAA_RS12135 () 142130..142354 - 225 Protein_141 MerR family DNA-binding protein -
SRAA_RS00690 () 142626..143993 - 1368 WP_045530335.1 IS1380 family transposase ISCARN34 Transposase
SRAA_RS00695 () 144055..144663 - 609 WP_082039824.1 ABC transporter substrate-binding protein -
SRAA_RS00700 () 145139..145426 + 288 WP_052467579.1 DUF1289 domain-containing protein -
SRAA_RS00705 () 145585..146022 + 438 WP_029462731.1 universal stress protein -
SRAA_RS00710 () 146101..152328 + 6228 WP_045530339.1 UvrABC system protein A VF
SRAA_RS00715 () 152332..152679 + 348 WP_045530340.1 hypothetical protein -
SRAA_RS00720 () 152706..153050 - 345 WP_052467421.1 hypothetical protein -
SRAA_RS00725 () 153102..154337 - 1236 WP_045530344.1 fatty acid desaturase -
SRAA_RS00730 () 154603..154836 + 234 WP_045532982.1 hypothetical protein -
SRAA_RS00735 () 154833..155111 + 279 WP_045530346.1 type II toxin-antitoxin system RelE/ParE family toxin -
SRAA_RS00740 () 155114..156571 - 1458 WP_045530348.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase -
SRAA_RS00745 () 156626..157540 + 915 WP_045532984.1 MOSC N-terminal beta barrel domain-containing protein -
SRAA_RS00750 () 157548..158546 - 999 WP_052467422.1 hypothetical protein -
SRAA_RS00755 () 158692..159786 + 1095 WP_045530350.1 redox-regulated ATPase YchF -
SRAA_RS00760 () 159828..160925 + 1098 WP_045530352.1 hypothetical protein -
SRAA_RS00765 () 160947..161852 - 906 WP_082039825.1 phosphatidylserine decarboxylase -
SRAA_RS00770 () 161884..164205 - 2322 WP_082040062.1 putative signaling protein VF
SRAA_RS00775 () 164241..164867 - 627 WP_144318671.1 methylamine utilization protein -
SRAA_RS00780 () 164864..165778 - 915 WP_052467424.1 DUF4394 domain-containing protein -
SRAA_RS00785 () 165981..166910 + 930 WP_045530354.1 ATP-binding cassette domain-containing protein -
SRAA_RS00790 () 166907..167737 + 831 WP_045530356.1 ABC transporter permease -
SRAA_RS00795 () 167760..168572 + 813 WP_045530359.1 phosphodiesterase -
SRAA_RS00800 () 168585..169880 - 1296 WP_144318672.1 Enterobactin exporter EntS VF
SRAA_RS00805 () 170008..170454 + 447 WP_045530366.1 universal stress protein -
SRAA_RS00810 () 170500..171189 + 690 WP_045530375.1 dienelactone hydrolase family protein -
SRAA_RS00815 () 171373..175032 + 3660 WP_045530386.1 indolepyruvate ferredoxin oxidoreductase family protein -
SRAA_RS00820 () 175081..176046 + 966 WP_045530388.1 DMT family transporter -
SRAA_RS00825 () 176128..176445 + 318 WP_029461887.1 preprotein translocase subunit YajC -
SRAA_RS00830 () 176523..178418 + 1896 WP_045530390.1 protein translocase subunit SecD -
SRAA_RS00835 () 178438..179391 + 954 WP_045530392.1 protein translocase subunit SecF -
SRAA_RS00840 () 179399..180613 - 1215 WP_045530394.1 DNA-processing protein DprA -
SRAA_RS00845 () 180588..181862 - 1275 WP_052467426.1 LysM peptidoglycan-binding domain-containing protein -
SRAA_RS00850 () 182079..182654 + 576 WP_045530398.1 peptide deformylase -
SRAA_RS00855 () 182669..183670 + 1002 WP_045530400.1 methionyl-tRNA formyltransferase -
SRAA_RS00860 () 183670..184437 + 768 WP_045530402.1 AzlC family ABC transporter permease -
SRAA_RS00865 () 184430..184765 + 336 WP_045530404.1 AzlD domain-containing protein -
SRAA_RS00870 () 184789..186663 - 1875 WP_052467427.1 Sensor protein TorS VF
SRAA_RS00875 () 186660..187178 - 519 WP_082039827.1 molybdopterin-dependent oxidoreductase -
SRAA_RS00880 () 187259..189355 - 2097 WP_045533000.1 UvrD-helicase domain-containing protein -
SRAA_RS00885 () 189537..190520 + 984 WP_045530406.1 AEC family transporter -
SRAA_RS00890 () 190598..190825 + 228 WP_045533002.1 CopG family transcriptional regulator -
SRAA_RS00895 () 191099..193234 - 2136 WP_045530408.1 primosomal protein N' -
SRAA_RS00900 () 193562..194680 - 1119 WP_045530410.1 uroporphyrinogen decarboxylase -
SRAA_RS12565 () 194756..194896 - 141 WP_171820205.1 hypothetical protein -
SRAA_RS00905 () 195019..195738 - 720 WP_197538512.1 hypothetical protein -
SRAA_RS00910 () 195839..197126 - 1288 Protein_187 ISL3-like element ISPpu12 family transposase -
SRAA_RS00915 () 197148..197660 - 513 WP_016915550.1 Lipoprotein signal peptidase VF
SRAA_RS00920 () 197664..198560 - 897 WP_045533006.1 cation transporter -
SRAA_RS00925 () 198656..199063 + 408 WP_045530413.1 Cd(II)/Pb(II)-responsive transcriptional regulator -
SRAA_RS00930 () 199145..199657 - 513 WP_045530415.1 ATP-binding protein -
SRAA_RS00935 () 199740..200174 - 435 WP_045530417.1 CoA-binding protein -
SRAA_RS00940 () 200171..200569 - 399 WP_045530419.1 rhodanese-like domain-containing protein -
SRAA_RS00945 () 200577..202742 - 2166 WP_045533007.1 thioredoxin family protein -
SRAA_RS00950 () 202857..203552 - 696 WP_045530421.1 Transcriptional regulatory protein ZraR VF
SRAA_RS00955 () 203594..205861 - 2268 WP_045530423.1 PAS domain-containing protein -
SRAA_RS00960 () 205867..206418 - 552 WP_171820206.1 DUF4390 domain-containing protein -
SRAA_RS00965 () 206501..207943 - 1443 WP_045530425.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
SRAA_RS00970 () 207940..212151 - 4212 WP_045530427.1 DNA-directed RNA polymerase subunit beta' -
SRAA_RS00975 () 212291..216409 - 4119 WP_045530429.1 DNA-directed RNA polymerase subunit beta -
SRAA_RS00980 () 216576..216953 - 378 WP_045530431.1 50S ribosomal protein L7/L12 -
SRAA_RS00985 () 216976..217497 - 522 WP_045533010.1 50S ribosomal protein L10 -
SRAA_RS00990 () 217793..218488 - 696 WP_045530433.1 50S ribosomal protein L1 -
SRAA_RS00995 () 218490..218921 - 432 WP_029461860.1 50S ribosomal protein L11 -
SRAA_RS01000 () 219219..219473 + 255 WP_045530435.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin Detail
SRAA_RS01005 () 219484..219750 + 267 WP_045530439.1 Txe/YoeB family addiction module toxin Toxin Detail
SRAA_RS01010 () 219915..220748 + 834 WP_045530441.1 hypothetical protein -
SRAA_RS12375 () 220762..221031 + 270 WP_144318674.1 hypothetical protein -
SRAA_RS12380 () 221018..221512 + 495 WP_144318675.1 hypothetical protein -
SRAA_RS11975 () 221496..222035 + 540 WP_052467431.1 hypothetical protein -
SRAA_RS01025 () 222234..223601 + 1368 WP_045530335.1 IS1380 family transposase ISCARN34 Transposase
SRAA_RS01030 () 223980..224486 + 507 WP_144318676.1 hypothetical protein -
SRAA_RS01035 () 224521..225330 + 810 WP_045530447.1 ABC transporter permease subunit -
SRAA_RS01040 () 225333..226133 + 801 WP_045530450.1 Bicarbonate transport ATP-binding protein CmpD VF
SRAA_RS01045 () 226277..226963 + 687 WP_045533014.1 urea carboxylase-associated family protein -
SRAA_RS01050 () 227014..227658 + 645 WP_045530451.1 DUF1989 domain-containing protein -
SRAA_RS01055 () 227767..231393 + 3627 WP_045530453.1 urea carboxylase -
SRAA_RS01060 () 231426..233258 + 1833 WP_045530455.1 Allophanate hydrolase VF
SRAA_RS01065 () 233853..234770 - 918 WP_045530457.1 hydroxymethylglutaryl-CoA lyase -
SRAA_RS01070 () 234767..235219 - 453 WP_045530459.1 hypothetical protein -
SRAA_RS01075 () 235173..235775 - 603 WP_045530461.1 nucleotidyltransferase domain-containing protein -
SRAA_RS01080 () 235825..237852 - 2028 WP_045530463.1 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha -
SRAA_RS01085 () 237972..238751 - 780 WP_045530465.1 enoyl-CoA hydratase/isomerase family protein -
SRAA_RS01090 () 238762..240369 - 1608 WP_045530467.1 methylcrotonoyl-CoA carboxylase -
SRAA_RS01095 () 240440..241384 - 945 WP_045533016.1 thioredoxin-disulfide reductase -
SRAA_RS01100 () 241505..244003 + 2499 WP_045530469.1 DNA translocase FtsK VF
SRAA_RS01105 () 244120..244394 + 275 Protein_227 BrnT family toxin -
SRAA_RS12150 () 244378..244680 + 303 WP_082039832.1 BrnA antitoxin family protein -
SRAA_RS01110 () 244836..245624 + 789 WP_082040064.1 outer membrane lipoprotein chaperone LolA -
SRAA_RS01115 () 245661..246983 + 1323 WP_045530471.1 replication-associated recombination protein A -
SRAA_RS01120 () 247029..247808 - 780 WP_045530473.1 helix-turn-helix domain-containing protein -
SRAA_RS01125 () 247979..248878 + 900 WP_144318761.1 4-hydroxyphenylpyruvate dioxygenase -
SRAA_RS01130 () 248875..249777 + 903 WP_045530475.1 sugar phosphate isomerase/epimerase -
SRAA_RS01135 () 249809..250642 - 834 WP_045530477.1 shikimate dehydrogenase -
SRAA_RS01140 () 251025..252044 + 1020 WP_052467434.1 tripartite tricarboxylate transporter substrate binding protein -
SRAA_RS01145 () 252111..252605 + 495 WP_045530479.1 tripartite tricarboxylate transporter TctB family protein -
SRAA_RS01150 () 252605..254098 + 1494 WP_045530481.1 tripartite tricarboxylate transporter permease -
SRAA_RS01155 () 254208..255746 + 1539 WP_045533023.1 lysine--tRNA ligase -
SRAA_RS01160 () 255789..256748 - 960 WP_045530483.1 RNA polymerase sigma factor RpoH -
SRAA_RS01165 () 256839..257372 - 534 WP_052467435.1 hemerythrin domain-containing protein -
SRAA_RS01170 () 257581..258738 + 1158 WP_045530485.1 PQQ-dependent sugar dehydrogenase -
SRAA_RS01175 () 258807..260240 + 1434 WP_045530487.1 coniferyl aldehyde dehydrogenase -
SRAA_RS01180 () 260230..261183 - 954 WP_082039833.1 UDP-2,3-diacylglucosamine diphosphatase -
SRAA_RS01185 () 261183..261995 - 813 WP_045530489.1 GNAT family N-acetyltransferase -
SRAA_RS01190 () 262143..263348 - 1206 WP_045530496.1 glycosyltransferase family 1 protein -
SRAA_RS01195 () 263559..264887 + 1329 WP_045530498.1 extracellular solute-binding protein -
SRAA_RS01200 () 264966..265850 + 885 WP_045530500.1 sn-glycerol-3-phosphate ABC transporter permease UgpA -
SRAA_RS01205 () 265860..266720 + 861 WP_045530502.1 sn-glycerol-3-phosphate ABC transporter permease UgpE -
SRAA_RS01210 () 266740..267747 + 1008 WP_045530504.1 sn-glycerol-3-phosphate import ATP-binding protein UgpC VF
SRAA_RS01215 () 267768..268520 + 753 WP_082040065.1 glycerophosphodiester phosphodiesterase -
SRAA_RS01220 () 268568..269368 + 801 WP_045530506.1 type III pantothenate kinase -
SRAA_RS01225 () 269317..270555 - 1239 WP_045530508.1 amidohydrolase -
SRAA_RS01230 () 270647..270904 - 258 WP_045533029.1 acyl-CoA-binding protein -
SRAA_RS01235 () 271089..272159 + 1071 WP_045530510.1 dTDP-glucose 4,6-dehydratase VF
SRAA_RS01240 () 272156..273091 + 936 WP_045530512.1 dTDP-4-dehydrorhamnose reductase -
SRAA_RS01245 () 273110..273982 + 873 WP_045530514.1 Glucose-1-phosphate thymidylyltransferase VF
SRAA_RS01250 () 273997..274566 + 570 WP_045530516.1 dTDP-4-dehydrorhamnose 3,5-epimerase VF
SRAA_RS01255 () 274585..275766 - 1182 WP_045530518.1 methionine adenosyltransferase -
SRAA_RS01260 () 275906..276808 + 903 WP_045530520.1 lysophospholipid acyltransferase family protein -
SRAA_RS01265 () 276742..277401 - 660 WP_082040066.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
SRAA_RS01270 () 277565..278191 + 627 WP_045530524.1 Cytochrome c4 VF
SRAA_RS01275 () 278358..280514 + 2157 WP_045530526.1 cytochrome c biogenesis protein ResB -
SRAA_RS01280 () 280511..281905 + 1395 WP_045530527.1 c-type cytochrome biogenesis protein CcsB -
SRAA_RS01285 () 281916..283211 - 1296 WP_082039834.1 diaminopimelate decarboxylase -
SRAA_RS12385 () 283256..283471 - 216 WP_144318677.1 lipoprotein -
SRAA_RS01290 () 283484..283819 + 336 WP_045530529.1 iron donor protein CyaY -
SRAA_RS01295 () 283803..286217 - 2415 WP_082039835.1 PBP1A family penicillin-binding protein -
SRAA_RS01300 () 286443..287522 + 1080 WP_045530533.1 hypothetical protein VF
SRAA_RS01305 () 287519..288157 + 639 WP_045530535.1 hypothetical protein VF
SRAA_RS01310 () 288188..288886 + 699 WP_045530536.1 hypothetical protein VF
SRAA_RS01315 () 288883..289431 + 549 WP_045530538.1 hypothetical protein VF
SRAA_RS01320 () 289428..291542 + 2115 WP_045530540.1 Type IV pilus biogenesis and competence protein PilQ VF
SRAA_RS01325 () 291560..292093 + 534 WP_082040067.1 shikimate kinase -
SRAA_RS01330 () 292075..293190 + 1116 WP_045533033.1 3-dehydroquinate synthase -
SRAA_RS01335 () 293237..294427 + 1191 WP_052467582.1 deoxyguanosinetriphosphate triphosphohydrolase -
SRAA_RS01340 () 294439..295125 + 687 WP_045530544.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance