MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 66039 bp
Accession: NZ_AP013063 Location: 3590692..3656730 Organism: Serratia marcescens SM39 Replicon: chromosome
Accession: NZ_AP013063 Location: 3590692..3656730 Organism: Serratia marcescens SM39 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM39_RS16770 () | 3586356..3587873 | - | 1518 | WP_033649459.1 | lysine--tRNA ligase | - |
| SM39_RS16780 () | 3589148..3590881 | - | 1734 | WP_033635823.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| SM39_RS16785 () | 3590888..3591604 | - | 717 | WP_041036552.1 | bifunctional protein-disulfide isomerase/oxidoreductase DsbC | - |
| SM39_RS16790 () | 3591631..3592530 | - | 900 | WP_033638574.1 | IS91 family transposase ISAzo26 | Transposase |
| SM39_RS16795 () | 3592637..3593155 | + | 519 | WP_033635825.1 | flavodoxin FldB | - |
| SM39_RS16800 () | 3593193..3594557 | - | 1365 | WP_041036554.1 | cell envelope integrity protein CreD | - |
| SM39_RS16805 () | 3594638..3596056 | - | 1419 | WP_033654070.1 | Sensor protein CreC | VF |
| SM39_RS16810 () | 3596053..3596748 | - | 696 | WP_041036556.1 | Transcriptional regulatory protein CreB | VF |
| SM39_RS16815 () | 3596748..3597170 | - | 423 | WP_041036558.1 | protein YgfX | Toxin Detail |
| SM39_RS16820 () | 3597151..3597417 | - | 267 | WP_004931679.1 | FAD assembly factor SdhE | Antitoxin Detail |
| SM39_RS16825 () | 3597738..3598730 | + | 993 | WP_041036561.1 | tRNA-modifying protein YgfZ | - |
| SM39_RS16830 () | 3598769..3599266 | - | 498 | WP_033649451.1 | DUF2165 domain-containing protein | - |
| SM39_RS16835 () | 3599417..3600091 | - | 675 | WP_038871224.1 | hypothetical protein | VF |
| SM39_RS16840 () | 3600275..3600883 | + | 609 | WP_025304127.1 | HD domain-containing protein | - |
| SM39_RS16845 () | 3600916..3601842 | - | 927 | WP_033635835.1 | ribokinase | - |
| SM39_RS16850 () | 3601839..3602747 | - | 909 | WP_041036566.1 | allose kinase | - |
| SM39_RS16855 () | 3602758..3603429 | - | 672 | WP_033654065.1 | D-allulose-6-phosphate 3-epimerase | VF |
| SM39_RS16860 () | 3603461..3604495 | - | 1035 | WP_033654064.1 | ABC transporter permease | - |
| SM39_RS16865 () | 3604506..3605492 | - | 987 | WP_033635839.1 | ABC transporter permease | - |
| SM39_RS16870 () | 3605485..3607002 | - | 1518 | WP_041036568.1 | Ribose import ATP-binding protein RbsA | VF |
| SM39_RS16875 () | 3607005..3607988 | - | 984 | WP_033635841.1 | substrate-binding domain-containing protein | - |
| SM39_RS16880 () | 3608038..3608856 | - | 819 | WP_004931653.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| SM39_RS16885 () | 3609168..3610493 | - | 1326 | WP_033654062.1 | MHS family MFS transporter | - |
| SM39_RS16890 () | 3610490..3611143 | - | 654 | WP_041036570.1 | hypothetical protein | - |
| SM39_RS16895 () | 3611193..3612539 | - | 1347 | WP_041036572.1 | amidase | - |
| SM39_RS16900 () | 3612539..3613252 | - | 714 | WP_033635845.1 | DUF2848 domain-containing protein | - |
| SM39_RS16905 () | 3613415..3614059 | + | 645 | WP_170929847.1 | GntR family transcriptional regulator | - |
| SM39_RS16910 () | 3614287..3614604 | - | 318 | WP_033635847.1 | BrnA antitoxin family protein | - |
| SM39_RS25490 () | 3614567..3614890 | - | 324 | WP_080335448.1 | BrnT family toxin | - |
| SM39_RS16920 () | 3614966..3615712 | - | 747 | WP_041036574.1 | putative oxidoreductase YgfF | VF |
| SM39_RS16925 () | 3615809..3616042 | - | 234 | WP_033635850.1 | hypothetical protein | - |
| SM39_RS16930 () | 3616232..3616891 | + | 660 | WP_033654056.1 | Swarming motility regulation protein RssB | VF |
| SM39_RS16935 () | 3616896..3618314 | + | 1419 | WP_039567272.1 | two-component sensor histidine kinase | - |
| SM39_RS16940 () | 3618311..3618841 | + | 531 | WP_039567270.1 | GNAT family N-acetyltransferase | - |
| SM39_RS16945 () | 3618852..3619817 | - | 966 | WP_033649435.1 | hypothetical protein | VF |
| SM39_RS16950 () | 3619926..3622805 | - | 2880 | WP_041036576.1 | aminomethyl-transferring glycine dehydrogenase | - |
| SM39_RS16955 () | 3622898..3623284 | - | 387 | WP_033649434.1 | glycine cleavage system protein GcvH | - |
| SM39_RS16960 () | 3623331..3624428 | - | 1098 | WP_033649433.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SM39_RS16965 () | 3624936..3626138 | - | 1203 | WP_033649432.1 | FAD-dependent 2-octaprenylphenol hydroxylase | - |
| SM39_RS16970 () | 3626219..3627397 | - | 1179 | WP_041036578.1 | 2-octaprenyl-6-methoxyphenyl hydroxylase | - |
| SM39_RS16975 () | 3627399..3628715 | - | 1317 | WP_041036580.1 | Xaa-Pro aminopeptidase | - |
| SM39_RS16980 () | 3628771..3629349 | - | 579 | WP_033635861.1 | YecA family protein | - |
| SM39_RS16985 () | 3629669..3629998 | + | 330 | WP_004931621.1 | cell division protein ZapA | - |
| SM39_RS16990 () | 3630274..3630882 | + | 609 | WP_041036584.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| SM39_RS16995 () | 3630931..3632169 | - | 1239 | WP_025304156.1 | phosphoglycerate dehydrogenase | - |
| SM39_RS17000 () | 3632462..3633118 | - | 657 | WP_041036586.1 | ribose-5-phosphate isomerase RpiA | - |
| SM39_RS17005 () | 3633323..3634216 | + | 894 | WP_033635863.1 | LysR family transcriptional regulator ArgP | - |
| SM39_RS17010 () | 3634265..3634996 | - | 732 | WP_025160209.1 | oxidative stress defense protein | - |
| SM39_RS17015 () | 3635118..3635735 | - | 618 | WP_025304159.1 | arginine exporter ArgO | - |
| SM39_RS17020 () | 3635940..3636638 | + | 699 | WP_041038103.1 | RluA family pseudouridine synthase | - |
| SM39_RS17025 () | 3636646..3637185 | - | 540 | WP_033635867.1 | DUF2058 domain-containing protein | - |
| SM39_RS17030 () | 3637502..3638479 | + | 978 | WP_041036588.1 | DUF1852 domain-containing protein | - |
| SM39_RS17035 () | 3638505..3639536 | + | 1032 | WP_033649411.1 | methionine synthase | - |
| SM39_RS17040 () | 3639708..3641057 | + | 1350 | WP_041036590.1 | aromatic acid/H+ symport family MFS transporter | - |
| SM39_RS17045 () | 3641140..3642006 | - | 867 | WP_033635871.1 | small-conductance mechanosensitive channel MscS | - |
| SM39_RS17050 () | 3642212..3642880 | + | 669 | WP_033635872.1 | DUF1345 domain-containing protein | - |
| SM39_RS17055 () | 3642937..3644016 | - | 1080 | WP_025304179.1 | class II fructose-bisphosphate aldolase | - |
| SM39_RS17060 () | 3644133..3645296 | - | 1164 | WP_028127700.1 | phosphoglycerate kinase | - |
| SM39_RS17065 () | 3645367..3646383 | - | 1017 | WP_004931582.1 | erythrose-4-phosphate dehydrogenase | - |
| SM39_RS17070 () | 3646696..3647634 | - | 939 | WP_033635873.1 | HTH-type transcriptional regulator DmlR | VF |
| SM39_RS17075 () | 3647738..3648823 | + | 1086 | WP_041036593.1 | tartrate dehydrogenase | - |
| SM39_RS17080 () | 3649188..3650798 | + | 1611 | WP_041036595.1 | BCCT family transporter | - |
| SM39_RS17085 () | 3650825..3651949 | + | 1125 | WP_033635879.1 | ring-hydroxylating oxygenase subunit alpha | - |
| SM39_RS17090 () | 3651995..3653443 | + | 1449 | WP_041036597.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| SM39_RS17095 () | 3653485..3654450 | + | 966 | WP_041036599.1 | PDR/VanB family oxidoreductase | - |
| SM39_RS17100 () | 3654481..3655551 | - | 1071 | WP_041036601.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| SM39_RS17105 () | 3655544..3657313 | - | 1770 | WP_033635883.1 | iron ABC transporter permease | - |
| SM39_RS17110 () | 3657392..3658480 | - | 1089 | WP_041038105.1 | ABC transporter substrate-binding protein | - |
| SM39_RS17115 () | 3659075..3660397 | + | 1323 | WP_039567241.1 | branched-chain amino acid transport system II carrier protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|