MGE detailed information
MGE type: Genomic_island MGE length: 37884 bp
Accession: NZ_AP012327 Location: 2059824..2097707 Organism: Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854 strain JCM 15439 Replicon: chromosome
Accession: NZ_AP012327 Location: 2059824..2097707 Organism: Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854 strain JCM 15439 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBKW_RS08755 () | 2056050..2057285 | - | 1236 | WP_033501472.1 | ATP-binding protein | - |
| BBKW_RS08760 () | 2057704..2058753 | - | 1050 | WP_193564548.1 | dTDP-glucose 4,6-dehydratase | - |
| BBKW_RS08765 () | 2058959..2059330 | - | 372 | WP_033501473.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| BBKW_RS08770 () | 2059327..2059578 | - | 252 | WP_048349543.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| BBKW_RS08775 () | 2059824..2060114 | + | 291 | WP_033501474.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| BBKW_RS08780 () | 2060132..2060437 | + | 306 | WP_033501508.1 | type II toxin-antitoxin system YafQ family toxin | - |
| BBKW_RS08785 () | 2060655..2063258 | + | 2604 | WP_048349544.1 | LTA synthase family protein | - |
| BBKW_RS08790 () | 2063330..2064574 | + | 1245 | Protein_1727 | UDP-glucose 6-dehydrogenase | VF |
| BBKW_RS08795 () | 2064681..2066567 | - | 1887 | WP_033501476.1 | General stress protein A | VF |
| BBKW_RS08800 () | 2066693..2067526 | + | 834 | WP_033501477.1 | ABC transporter permease | - |
| BBKW_RS08805 () | 2067530..2068777 | + | 1248 | WP_033501478.1 | Teichoic acids export ATP-binding protein TagH | VF |
| BBKW_RS08810 () | 2068919..2070130 | + | 1212 | WP_048349545.1 | putative glycosyltransferase EpsJ | VF |
| BBKW_RS10335 () | 2070157..2073183 | + | 3027 | WP_033501481.1 | putative glycosyltransferase EpsJ | VF |
| BBKW_RS08820 () | 2073254..2074960 | - | 1707 | WP_033501482.1 | hypothetical protein | - |
| BBKW_RS08825 () | 2075067..2076665 | - | 1599 | WP_033501509.1 | hypothetical protein | - |
| BBKW_RS08830 () | 2076745..2077854 | - | 1110 | WP_033501483.1 | acyltransferase family protein | - |
| BBKW_RS08835 () | 2078040..2078990 | + | 951 | WP_033501484.1 | glycosyltransferase family 2 protein | - |
| BBKW_RS08840 () | 2079059..2081662 | - | 2604 | WP_033501485.1 | Serine protease 1 | VF |
| BBKW_RS08845 () | 2081932..2082486 | + | 555 | WP_051920327.1 | DUF4065 domain-containing protein | Antitoxin Detail |
| BBKW_RS08850 () | 2082486..2082803 | + | 318 | WP_033501486.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BBKW_RS08855 () | 2083081..2084007 | + | 927 | WP_034255162.1 | hypothetical protein | - |
| BBKW_RS08860 () | 2084168..2085793 | + | 1626 | WP_033501512.1 | sialate O-acetylesterase | - |
| BBKW_RS08865 () | 2085916..2086278 | - | 363 | WP_033501487.1 | hypothetical protein | - |
| BBKW_RS10625 () | 2086653..2087156 | - | 504 | WP_126016617.1 | Na+:H+ dicarboxylate symporter | - |
| BBKW_RS08870 () | 2087156..2087476 | - | 321 | WP_033501488.1 | hypothetical protein | - |
| BBKW_RS08875 () | 2087480..2088073 | - | 594 | WP_144314079.1 | hypothetical protein | - |
| BBKW_RS10875 () | 2088303..2089091 | - | 789 | WP_193786594.1 | HNH endonuclease | - |
| BBKW_RS10635 () | 2089538..2089696 | + | 159 | WP_157872376.1 | hypothetical protein | - |
| BBKW_RS08885 () | 2089816..2090733 | - | 918 | WP_033501490.1 | DUF4928 family protein | - |
| BBKW_RS08890 () | 2090746..2091924 | - | 1179 | WP_033501491.1 | DNA (cytosine-5-)-methyltransferase | - |
| BBKW_RS08895 () | 2092022..2092783 | + | 762 | WP_033501492.1 | helix-turn-helix domain-containing protein | - |
| BBKW_RS08900 () | 2092881..2093174 | - | 294 | WP_033501493.1 | hypothetical protein | - |
| BBKW_RS08905 () | 2093411..2093812 | - | 402 | WP_033501494.1 | hypothetical protein | - |
| BBKW_RS10340 () | 2093825..2094505 | - | 681 | WP_081962280.1 | AAA family ATPase | - |
| BBKW_RS10345 () | 2094591..2095667 | - | 1077 | WP_081962281.1 | hypothetical protein | - |
| BBKW_RS08915 () | 2095670..2095864 | - | 195 | WP_033501495.1 | helix-turn-helix domain-containing protein | - |
| BBKW_RS08920 () | 2096314..2097978 | - | 1665 | Protein_1756 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|