MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 52560 bp
Accession: NC_023018 Location: 4694056..4746615 Organism: Pandoraea sp. RB-44 Replicon:
Accession: NC_023018 Location: 4694056..4746615 Organism: Pandoraea sp. RB-44 Replicon:
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| X636_RS21125 () | 4689618..4690751 | - | 1134 | WP_023594144.1 | glutamate 5-kinase | - |
| X636_RS21130 () | 4690858..4691997 | - | 1140 | WP_023594143.1 | GTPase ObgE | - |
| X636_RS21135 () | 4692146..4692406 | - | 261 | WP_023594142.1 | 50S ribosomal protein L27 | - |
| X636_RS21140 () | 4692435..4692746 | - | 312 | WP_023594141.1 | 50S ribosomal protein L21 | - |
| X636_RS21145 () | 4693023..4694003 | + | 981 | WP_023594140.1 | polyprenyl synthetase family protein | - |
| X636_RS21160 () | 4695073..4695807 | + | 735 | WP_158443181.1 | replication initiator protein A | - |
| X636_RS21165 () | 4695911..4696216 | + | 306 | WP_020850773.1 | hypothetical protein | - |
| X636_RS21170 () | 4696279..4698393 | + | 2115 | WP_023594137.1 | DotA/TraY family protein | - |
| X636_RS21175 () | 4698403..4698924 | + | 522 | WP_004541357.1 | hypothetical protein | - |
| X636_RS21180 () | 4699151..4701352 | + | 2202 | WP_004541389.1 | AAA family ATPase | - |
| X636_RS25150 () | 4701394..4702053 | - | 660 | WP_020850627.1 | hypothetical protein | - |
| X636_RS25085 () | 4702158..4702406 | - | 249 | WP_004541364.1 | hypothetical protein | - |
| X636_RS21190 () | 4702602..4702922 | - | 321 | WP_024429388.1 | hypothetical protein | - |
| X636_RS21195 () | 4702919..4703209 | - | 291 | WP_023872356.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| X636_RS21200 () | 4703197..4703475 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| X636_RS21205 () | 4703556..4705577 | - | 2022 | WP_072619152.1 | relaxase/mobilization nuclease domain-containing protein | - |
| X636_RS21210 () | 4705583..4705852 | - | 270 | WP_020850841.1 | ribbon-helix-helix protein, CopG family | - |
| X636_RS21215 () | 4706343..4706600 | + | 258 | WP_004541318.1 | hypothetical protein | - |
| X636_RS21220 () | 4706819..4707636 | + | 818 | Protein_4167 | IS5 family transposase ISBugl2 | Transposase |
| X636_RS24485 () | 4707774..4708214 | + | 441 | WP_080685279.1 | tyrosine-type recombinase/integrase | - |
| X636_RS21230 () | 4708367..4708951 | - | 585 | Protein_4169 | MBL fold metallo-hydrolase | - |
| X636_RS21235 () | 4709666..4709890 | + | 225 | WP_023594129.1 | phenol hydroxylase subunit | - |
| X636_RS21240 () | 4709978..4710973 | + | 996 | WP_023872364.1 | aromatic/alkene monooxygenase hydroxylase subunit beta | - |
| X636_RS21245 () | 4711013..4711282 | + | 270 | WP_011875724.1 | MmoB/DmpM family protein | - |
| X636_RS21250 () | 4711305..4712864 | + | 1560 | WP_023872365.1 | aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha | - |
| X636_RS21255 () | 4712861..4713217 | + | 357 | WP_023872366.1 | phenol hydroxylase subunit P4 | - |
| X636_RS21260 () | 4713296..4714360 | + | 1065 | WP_023872367.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| X636_RS21265 () | 4714363..4714719 | + | 357 | WP_011516091.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| X636_RS21270 () | 4714737..4715681 | + | 945 | WP_023872369.1 | catechol 2,3-dioxygenase | - |
| X636_RS21275 () | 4715703..4716152 | + | 450 | WP_023872370.1 | heme-binding protein | - |
| X636_RS21280 () | 4716219..4717730 | + | 1512 | WP_023872371.1 | 2-hydroxymuconic semialdehyde dehydrogenase | - |
| X636_RS21285 () | 4717733..4718515 | + | 783 | WP_023872372.1 | 2-oxopent-4-enoate hydratase | - |
| X636_RS21290 () | 4718594..4719505 | + | 912 | WP_023594121.1 | acetaldehyde dehydrogenase (acetylating) | - |
| X636_RS21295 () | 4719525..4720571 | + | 1047 | WP_023594120.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| X636_RS21300 () | 4720568..4721356 | + | 789 | WP_023594119.1 | 2-oxo-3-hexenedioate decarboxylase | - |
| X636_RS21305 () | 4721368..4721559 | + | 192 | WP_011516083.1 | 4-oxalocrotonate tautomerase family protein | - |
| X636_RS21310 () | 4721617..4723119 | + | 1503 | WP_023594118.1 | aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha | - |
| X636_RS21315 () | 4723188..4723454 | + | 267 | WP_023872373.1 | toluene-4-monooxygenase system B family protein | - |
| X636_RS21320 () | 4723510..4723845 | + | 336 | WP_023594116.1 | Rieske 2Fe-2S domain-containing protein | - |
| X636_RS21325 () | 4723886..4724200 | + | 315 | WP_023594115.1 | MmoB/DmpM family protein | - |
| X636_RS21330 () | 4724255..4725241 | + | 987 | WP_023594114.1 | aromatic/alkene monooxygenase hydroxylase subunit beta | - |
| X636_RS21335 () | 4725341..4726363 | + | 1023 | WP_023872374.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| X636_RS21340 () | 4726428..4727033 | + | 606 | WP_023872375.1 | glutathione transferase GstA | - |
| X636_RS21345 () | 4727095..4728111 | + | 1017 | WP_023872376.1 | IS30 family transposase IS1382 | Transposase |
| X636_RS21350 () | 4728257..4729318 | + | 1062 | WP_023872378.1 | alcohol dehydrogenase | - |
| X636_RS21355 () | 4729397..4730791 | + | 1395 | WP_023594110.1 | outer membrane protein transport protein | - |
| X636_RS21360 () | 4730934..4731173 | + | 240 | WP_080685280.1 | hypothetical protein | - |
| X636_RS21365 () | 4731273..4732103 | + | 831 | WP_023594108.1 | alpha/beta fold hydrolase | - |
| X636_RS21370 () | 4732283..4734127 | + | 1845 | WP_023594107.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| X636_RS24815 () | 4734283..4734669 | - | 387 | WP_023872379.1 | IS5 family transposase ISParac1 | Transposase |
| X636_RS21395 () | 4736373..4736615 | + | 243 | WP_023872380.1 | hypothetical protein | - |
| X636_RS21400 () | 4736751..4737344 | + | 594 | WP_023594104.1 | helix-turn-helix domain-containing protein | - |
| X636_RS21405 () | 4737383..4738831 | + | 1449 | WP_023594103.1 | hypothetical protein ; Integrase | Integrase |
| X636_RS21410 () | 4738828..4739424 | + | 597 | Protein_4203 | hypothetical protein | - |
| X636_RS21415 () | 4739568..4740146 | + | 579 | WP_023594101.1 | hypothetical protein | - |
| X636_RS21430 () | 4740673..4741326 | - | 654 | WP_023594100.1 | IS91 family transposase ISAzo26 | Transposase |
| X636_RS21435 () | 4741386..4742203 | - | 818 | Protein_4206 | IS5 family transposase ISBugl2 | Transposase |
| X636_RS21440 () | 4742284..4743138 | + | 855 | WP_023594099.1 | hypothetical protein | - |
| X636_RS21445 () | 4743661..4745181 | + | 1521 | WP_004541200.1 | hypothetical protein | - |
| X636_RS21450 () | 4745394..4746491 | - | 1098 | WP_023594098.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| X636_RS21455 () | 4746781..4747311 | - | 531 | WP_023872381.1 | cytochrome b | - |
| X636_RS21460 () | 4747311..4748399 | - | 1089 | WP_023872382.1 | catalase family peroxidase | - |
| X636_RS21465 () | 4748557..4749078 | + | 522 | WP_023594080.1 | sigma-70 family RNA polymerase sigma factor | - |
| X636_RS21470 () | 4749075..4749830 | + | 756 | WP_023872383.1 | anti-sigma factor | - |
| X636_RS21475 () | 4749945..4751237 | + | 1293 | WP_023872384.1 | HlyC/CorC family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|