MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 52393 bp
Accession: NC_022904 Location: 383346..435738 Organism: Pandoraea pnomenusa 3kgm Replicon: chromosome
Accession: NC_022904 Location: 383346..435738 Organism: Pandoraea pnomenusa 3kgm Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U875_RS24850 () | 378766..380568 | + | 1803 | WP_144347202.1 | AAA family ATPase | - |
| U875_RS25390 () | 380673..381101 | - | 429 | WP_144347204.1 | hypothetical protein | - |
| U875_RS01690 () | 381543..383180 | - | 1638 | WP_023594097.1 | site-specific integrase | - |
| U875_RS01695 () | 383472..384569 | + | 1098 | WP_023594098.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| U875_RS01700 () | 384782..386302 | - | 1521 | WP_004541200.1 | hypothetical protein | - |
| U875_RS01705 () | 386825..387679 | - | 855 | WP_023594099.1 | hypothetical protein | - |
| U875_RS24855 () | 387760..388577 | + | 818 | Protein_332 | IS5 family transposase ISBugl2 | Transposase |
| U875_RS01720 () | 388637..389290 | + | 654 | WP_023594100.1 | IS91 family transposase ISAzo26 | Transposase |
| U875_RS01725 () | 389817..390395 | - | 579 | WP_023594101.1 | hypothetical protein | - |
| U875_RS01730 () | 390539..391135 | - | 597 | Protein_335 | hypothetical protein | - |
| U875_RS01735 () | 391132..392580 | - | 1449 | WP_023594103.1 | hypothetical protein ; Integrase | Integrase |
| U875_RS01740 () | 392619..393212 | - | 594 | WP_023594104.1 | helix-turn-helix domain-containing protein | - |
| U875_RS01745 () | 393348..393590 | - | 243 | WP_023872380.1 | hypothetical protein | - |
| U875_RS01755 () | 393732..394858 | + | 1127 | WP_144347206.1 | IS3 family transposase ISDet2 | Transposase |
| U875_RS25395 () | 395294..395680 | + | 387 | WP_023872379.1 | IS5 family transposase ISParac1 | Transposase |
| U875_RS01770 () | 395836..397680 | - | 1845 | WP_023594107.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| U875_RS01775 () | 397858..398688 | - | 831 | WP_023594108.1 | alpha/beta fold hydrolase | - |
| U875_RS01780 () | 398788..399027 | - | 240 | WP_080685280.1 | hypothetical protein | - |
| U875_RS01785 () | 399170..400564 | - | 1395 | WP_023594110.1 | outer membrane protein transport protein | - |
| U875_RS01790 () | 400643..401704 | - | 1062 | WP_023594111.1 | alcohol dehydrogenase | - |
| U875_RS01795 () | 401842..402447 | - | 606 | WP_023594112.1 | glutathione transferase GstA | - |
| U875_RS24875 () | 402557..403374 | + | 818 | Protein_347 | IS5 family transposase ISBugl2 | Transposase |
| U875_RS01810 () | 403430..404452 | - | 1023 | WP_023594113.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| U875_RS01815 () | 404552..405538 | - | 987 | WP_023594114.1 | aromatic/alkene monooxygenase hydroxylase subunit beta | - |
| U875_RS01820 () | 405593..405907 | - | 315 | WP_023594115.1 | MmoB/DmpM family protein | - |
| U875_RS01825 () | 405948..406283 | - | 336 | WP_023594116.1 | Rieske 2Fe-2S domain-containing protein | - |
| U875_RS01830 () | 406339..406605 | - | 267 | WP_023872373.1 | toluene-4-monooxygenase system B family protein | - |
| U875_RS01835 () | 406674..408176 | - | 1503 | WP_023594118.1 | aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha | - |
| U875_RS01840 () | 408234..408425 | - | 192 | WP_011516083.1 | 4-oxalocrotonate tautomerase family protein | - |
| U875_RS01845 () | 408437..409225 | - | 789 | WP_023594119.1 | 2-oxo-3-hexenedioate decarboxylase | - |
| U875_RS01850 () | 409222..410268 | - | 1047 | WP_023594120.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| U875_RS01855 () | 410288..411199 | - | 912 | WP_023594121.1 | acetaldehyde dehydrogenase (acetylating) | - |
| U875_RS01860 () | 411278..412060 | - | 783 | WP_031627062.1 | 2-oxopent-4-enoate hydratase | - |
| U875_RS01865 () | 412063..413574 | - | 1512 | WP_023594123.1 | 2-hydroxymuconic semialdehyde dehydrogenase | - |
| U875_RS01870 () | 413641..414090 | - | 450 | WP_023594124.1 | heme-binding protein | - |
| U875_RS01875 () | 414112..415056 | - | 945 | WP_011875728.1 | catechol 2,3-dioxygenase | - |
| U875_RS01880 () | 415075..415431 | - | 357 | WP_011875727.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| U875_RS01885 () | 415434..416498 | - | 1065 | WP_023594126.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| U875_RS01890 () | 416577..416933 | - | 357 | WP_011516093.1 | phenol hydroxylase subunit P4 | - |
| U875_RS01895 () | 416930..418489 | - | 1560 | WP_023594127.1 | aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha | - |
| U875_RS01900 () | 418512..418781 | - | 270 | WP_011875724.1 | MmoB/DmpM family protein | - |
| U875_RS01905 () | 418821..419816 | - | 996 | WP_023594128.1 | aromatic/alkene monooxygenase hydroxylase subunit beta | - |
| U875_RS01910 () | 419904..420128 | - | 225 | WP_023594129.1 | phenol hydroxylase subunit | - |
| U875_RS01915 () | 420843..421427 | + | 585 | Protein_369 | MBL fold metallo-hydrolase | - |
| U875_RS24880 () | 421580..422020 | - | 441 | WP_080685279.1 | tyrosine-type recombinase/integrase | - |
| U875_RS24885 () | 422158..422975 | - | 818 | Protein_371 | IS5 family transposase ISBugl2 | Transposase |
| U875_RS24890 () | 423194..423451 | - | 258 | WP_004541318.1 | hypothetical protein | - |
| U875_RS01935 () | 423942..424211 | + | 270 | WP_020850841.1 | ribbon-helix-helix protein, CopG family | - |
| U875_RS01940 () | 424217..426238 | + | 2022 | WP_072619152.1 | relaxase/mobilization nuclease domain-containing protein | - |
| U875_RS01945 () | 426319..426597 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| U875_RS01950 () | 426585..426875 | + | 291 | WP_023594135.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| U875_RS01955 () | 426872..427192 | + | 321 | WP_024429388.1 | hypothetical protein | - |
| U875_RS25955 () | 427388..427636 | + | 249 | WP_004541364.1 | hypothetical protein | - |
| U875_RS25960 () | 427741..428400 | + | 660 | WP_020850627.1 | hypothetical protein | - |
| U875_RS01965 () | 428442..430643 | - | 2202 | WP_004541389.1 | AAA family ATPase | - |
| U875_RS01970 () | 430870..431391 | - | 522 | WP_004541357.1 | hypothetical protein | - |
| U875_RS01975 () | 431401..433515 | - | 2115 | WP_023594137.1 | DotA/TraY family protein | - |
| U875_RS01980 () | 433578..433883 | - | 306 | WP_020850773.1 | hypothetical protein | - |
| U875_RS01985 () | 433987..434721 | - | 735 | WP_158443181.1 | replication initiator protein A | - |
| U875_RS02000 () | 435791..436771 | - | 981 | WP_023594140.1 | polyprenyl synthetase family protein | - |
| U875_RS02005 () | 437048..437359 | + | 312 | WP_023594141.1 | 50S ribosomal protein L21 | - |
| U875_RS02010 () | 437388..437648 | + | 261 | WP_023594142.1 | 50S ribosomal protein L27 | - |
| U875_RS02015 () | 437797..438936 | + | 1140 | WP_023594143.1 | GTPase ObgE | - |
| U875_RS02020 () | 439043..440176 | + | 1134 | WP_023594144.1 | glutamate 5-kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|