MGE detailed information
MGE type: Prophage MGE length: 40313 bp
Accession: NC_022808 Location: 1445400..1485712 Organism: Pseudomonas aeruginosa PA1 Replicon: chromosome
Accession: NC_022808 Location: 1445400..1485712 Organism: Pseudomonas aeruginosa PA1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA1S_RS06745 (PA1S_06750) | 1440994..1441974 | + | 981 | WP_023517929.1 | DUF4340 domain-containing protein | - |
| PA1S_RS06750 (PA1S_06755) | 1441981..1442403 | - | 423 | WP_003092439.1 | SufE family protein | - |
| PA1S_RS06755 (PA1S_06760) | 1442400..1443605 | - | 1206 | WP_003098634.1 | cysteine desulfurase | - |
| PA1S_RS06760 (PA1S_06765) | 1443700..1444734 | - | 1035 | WP_003092431.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase | - |
| PA1S_RS06765 (PA1S_06770) | 1444764..1445387 | - | 624 | WP_023517928.1 | LysE family translocator | - |
| PA1S_RS06770 (PA1S_06775) | 1445400..1445747 | - | 348 | WP_003098619.1 | ArsC family reductase | - |
| PA1S_RS06775 (PA1S_06780) | 1445814..1446917 | - | 1104 | WP_043487002.1 | hypothetical protein ; Integrase | Integrase |
| PA1S_RS30310 | 1446898..1447140 | - | 243 | WP_071534497.1 | excisionase | - |
| PA1S_RS06780 (PA1S_06785) | 1447357..1447653 | - | 297 | WP_043487000.1 | hypothetical protein | - |
| PA1S_RS06785 (PA1S_06790) | 1447726..1447929 | - | 204 | WP_023517926.1 | hypothetical protein | - |
| PA1S_RS06790 (PA1S_06795) | 1447926..1448222 | - | 297 | WP_043486997.1 | hypothetical protein | - |
| PA1S_RS06795 (PA1S_06800) | 1448215..1448820 | - | 606 | WP_043486994.1 | hypothetical protein | - |
| PA1S_RS06800 (PA1S_06810) | 1448990..1449238 | - | 249 | WP_023517923.1 | hypothetical protein | - |
| PA1S_RS06805 (PA1S_06815) | 1449235..1449864 | - | 630 | WP_023517922.1 | hypothetical protein | - |
| PA1S_RS06810 (PA1S_06820) | 1450113..1450649 | - | 537 | WP_023517921.1 | DUF4406 domain-containing protein | - |
| PA1S_RS06815 (PA1S_06825) | 1450646..1452181 | - | 1536 | WP_023517920.1 | DNA cytosine methyltransferase | - |
| PA1S_RS06820 (PA1S_06830) | 1452246..1452548 | - | 303 | WP_023517919.1 | hypothetical protein | - |
| PA1S_RS06825 (PA1S_06835) | 1452548..1452862 | - | 315 | WP_023114613.1 | hypothetical protein | - |
| PA1S_RS06830 (PA1S_06840) | 1453297..1453545 | - | 249 | WP_043486989.1 | hypothetical protein | - |
| PA1S_RS06835 (PA1S_06845) | 1453556..1453942 | - | 387 | WP_023517916.1 | LuxR family transcriptional regulator | - |
| PA1S_RS06840 (PA1S_06850) | 1454160..1455026 | - | 867 | WP_034013775.1 | ParB N-terminal domain-containing protein | - |
| PA1S_RS06845 (PA1S_06855) | 1455296..1455511 | - | 216 | WP_023517914.1 | hypothetical protein | - |
| PA1S_RS06850 (PA1S_06860) | 1455946..1456200 | + | 255 | WP_023517913.1 | DUF1654 domain-containing protein | - |
| PA1S_RS06855 (PA1S_06865) | 1456254..1456592 | - | 339 | WP_003085700.1 | hypothetical protein | - |
| PA1S_RS06860 (PA1S_06870) | 1456610..1456903 | - | 294 | WP_019396631.1 | hypothetical protein | - |
| PA1S_RS06865 (PA1S_06875) | 1457016..1457756 | - | 741 | WP_043486984.1 | helix-turn-helix transcriptional regulator | - |
| PA1S_RS06875 (PA1S_06885) | 1458268..1458972 | + | 705 | WP_079279906.1 | phage regulatory protein/antirepressor Ant | - |
| PA1S_RS06880 (PA1S_06890) | 1459037..1459798 | + | 762 | WP_043486980.1 | helix-turn-helix domain-containing protein | - |
| PA1S_RS06885 (PA1S_06895) | 1459795..1460478 | + | 684 | WP_043486977.1 | hypothetical protein | - |
| PA1S_RS06890 (PA1S_06900) | 1460475..1460681 | + | 207 | WP_003159465.1 | hypothetical protein | - |
| PA1S_RS06895 (PA1S_06905) | 1460678..1461259 | + | 582 | WP_021205616.1 | recombination protein NinG | - |
| PA1S_RS06900 (PA1S_06910) | 1461256..1461552 | + | 297 | WP_043486973.1 | hypothetical protein | - |
| PA1S_RS06905 (PA1S_06915) | 1461590..1462264 | + | 675 | WP_043486972.1 | hypothetical protein | - |
| PA1S_RS31585 | 1462377..1463096 | - | 720 | WP_228478067.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PA1S_RS06915 (PA1S_06925) | 1463143..1463325 | - | 183 | WP_003098540.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PA1S_RS30320 | 1463541..1464062 | + | 522 | WP_158309806.1 | GspH/FimT family pseudopilin | - |
| PA1S_RS06920 (PA1S_06930) | 1464246..1464560 | + | 315 | WP_023517910.1 | phage holin, lambda family | - |
| PA1S_RS06925 (PA1S_06935) | 1464560..1465177 | + | 618 | WP_023517909.1 | glycoside hydrolase family 19 protein | - |
| PA1S_RS06930 (PA1S_06940) | 1465195..1465626 | + | 432 | WP_194736254.1 | hypothetical protein | - |
| PA1S_RS30325 (PA1S_06945) | 1465763..1466341 | + | 579 | WP_079279905.1 | HNH endonuclease | - |
| PA1S_RS06935 (PA1S_06950) | 1466248..1466730 | + | 483 | WP_033940323.1 | phage terminase small subunit P27 family | - |
| PA1S_RS06940 (PA1S_06955) | 1466734..1468461 | + | 1728 | WP_023465507.1 | terminase large subunit | - |
| PA1S_RS06945 (PA1S_06960) | 1468461..1469684 | + | 1224 | WP_023517907.1 | phage portal protein | - |
| PA1S_RS06950 (PA1S_06965) | 1469662..1470315 | + | 654 | WP_023465519.1 | HK97 family phage prohead protease | - |
| PA1S_RS06955 (PA1S_06970) | 1470326..1471528 | + | 1203 | WP_023517906.1 | phage major capsid protein | - |
| PA1S_RS06960 (PA1S_06975) | 1471574..1471852 | + | 279 | WP_023130881.1 | hypothetical protein | - |
| PA1S_RS06965 (PA1S_06980) | 1471845..1472165 | + | 321 | WP_023517905.1 | head-tail connector protein | - |
| PA1S_RS06970 (PA1S_06985) | 1472188..1472370 | + | 183 | WP_033955061.1 | hypothetical protein | - |
| PA1S_RS06975 (PA1S_06990) | 1472380..1472931 | + | 552 | WP_023517904.1 | hypothetical protein | - |
| PA1S_RS06980 (PA1S_06995) | 1472928..1473521 | + | 594 | WP_043486965.1 | hypothetical protein | - |
| PA1S_RS06985 (PA1S_07000) | 1473534..1473971 | + | 438 | WP_033955065.1 | hypothetical protein | - |
| PA1S_RS06990 (PA1S_07005) | 1473995..1474780 | + | 786 | WP_023517902.1 | hypothetical protein | - |
| PA1S_RS06995 (PA1S_07010) | 1474837..1475202 | + | 366 | WP_023517901.1 | hypothetical protein | - |
| PA1S_RS31385 | 1475247..1475396 | + | 150 | WP_023465516.1 | hypothetical protein | - |
| PA1S_RS07000 (PA1S_07015) | 1475386..1477527 | + | 2142 | WP_023517900.1 | tape measure protein | - |
| PA1S_RS07005 (PA1S_07020) | 1477537..1478040 | + | 504 | WP_003098501.1 | hypothetical protein | - |
| PA1S_RS07010 (PA1S_07025) | 1478042..1479745 | + | 1704 | WP_023517899.1 | hypothetical protein | - |
| PA1S_RS07015 (PA1S_07030) | 1479748..1480158 | + | 411 | WP_014602605.1 | hypothetical protein | - |
| PA1S_RS07020 (PA1S_07035) | 1480158..1480703 | + | 546 | WP_034006700.1 | hypothetical protein | - |
| PA1S_RS07025 (PA1S_07040) | 1480716..1481138 | + | 423 | WP_003159482.1 | hypothetical protein | - |
| PA1S_RS30330 | 1481125..1482624 | + | 1500 | WP_003159483.1 | hypothetical protein | - |
| PA1S_RS07030 (PA1S_07045) | 1482647..1483234 | + | 588 | WP_003159484.1 | hypothetical protein | - |
| PA1S_RS07035 (PA1S_07050) | 1483227..1483418 | + | 192 | WP_003159486.1 | hypothetical protein | - |
| PA1S_RS07040 (PA1S_07055) | 1483423..1483983 | + | 561 | WP_023132451.1 | hypothetical protein | - |
| PA1S_RS07045 (PA1S_07060) | 1483983..1484264 | + | 282 | WP_014602608.1 | hypothetical protein | - |
| PA1S_RS07050 (PA1S_07065) | 1484491..1485189 | + | 699 | Protein_1414 | phage tail protein | - |
| PA1S_RS07055 (PA1S_07070) | 1485189..1485488 | + | 300 | WP_041025232.1 | hypothetical protein | - |
| PA1S_RS07060 (PA1S_07075) | 1485485..1485712 | + | 228 | WP_014602610.1 | hypothetical protein | - |
| PA1S_RS07065 (PA1S_07080) | 1485741..1486013 | + | 273 | WP_043487337.1 | hypothetical protein | - |
| PA1S_RS07070 (PA1S_07085) | 1486062..1486967 | - | 906 | WP_043486958.1 | ATP-dependent Clp protease proteolytic subunit | - |
| PA1S_RS07080 (PA1S_07095) | 1487902..1488255 | + | 354 | WP_003098616.1 | YkgJ family cysteine cluster protein | - |
| PA1S_RS07085 (PA1S_07100) | 1488270..1488563 | - | 294 | WP_003098613.1 | hypothetical protein | - |
| PA1S_RS07090 (PA1S_07105) | 1488885..1489244 | - | 360 | WP_003092416.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|