MGE detailed information
MGE type: Conjugative plasmid MGE length: 88546 bp
Accession: NC_022742 Location: 1..88546 Organism: Escherichia coli Replicon: plasmid pHUSEC2011-1
Accession: NC_022742 Location: 1..88546 Organism: Escherichia coli Replicon: plasmid pHUSEC2011-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUS2011_RS27470 () | 144..1175 | + | 1032 | WP_000907869.1 | replication initiation protein | - |
| HUS2011_RS27475 () | 2245..2754 | - | 510 | WP_000045395.1 | hypothetical protein | - |
| HUS2011_RS27480 () | 2810..3412 | - | 603 | WP_000517687.1 | hypothetical protein | - |
| HUS2011_RS27485 () | 3765..5111 | + | 1347 | WP_001132021.1 | hypothetical protein | - |
| HUS2011_RS27490 () | 5599..8394 | - | 2796 | Protein_4 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUS2011_RS27495 () | 8408..8740 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| HUS2011_RS27500 () | 8787..9662 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| HUS2011_RS27510 () | 9918..11180 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| HUS2011_RS27515 () | 11386..11580 | - | 195 | Protein_8 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUS2011_RS27520 () | 11744..12301 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HUS2011_RS27525 () | 12484..13344 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HUS2011_RS31770 () | 13613..13915 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| HUS2011_RS27535 () | 13912..14538 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| HUS2011_RS27540 () | 14742..16013 | - | 1272 | WP_000457515.1 | Y-family DNA polymerase | - |
| HUS2011_RS27545 () | 16013..16450 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HUS2011_RS27550 () | 16447..16695 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HUS2011_RS27555 () | 17114..18016 | + | 903 | WP_023383827.1 | DUF1281 domain-containing protein | - |
| HUS2011_RS27560 () | 18013..18324 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| HUS2011_RS27565 () | 18401..19084 | + | 684 | WP_000086153.1 | DNA methylase | - |
| HUS2011_RS27570 () | 19085..19306 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| HUS2011_RS27575 () | 19320..19754 | + | 435 | WP_000274412.1 | DUF1380 family protein | - |
| HUS2011_RS32025 () | 19800..20576 | + | 777 | WP_001005022.1 | hypothetical protein | - |
| HUS2011_RS27585 () | 21113..21415 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| HUS2011_RS27590 () | 21462..21884 | + | 423 | WP_000271745.1 | DUF1380 family protein | - |
| HUS2011_RS27595 () | 21881..22072 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| HUS2011_RS31060 () | 22086..22457 | + | 372 | WP_001392076.1 | hypothetical protein | - |
| HUS2011_RS27605 () | 22841..23368 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| HUS2011_RS27610 () | 23426..23659 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| HUS2011_RS27615 () | 23718..25676 | + | 1959 | WP_001145488.1 | ParB/RepB/Spo0J family partition protein | - |
| HUS2011_RS27620 () | 25731..26165 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| HUS2011_RS27625 () | 26162..26881 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| HUS2011_RS27630 () | 26878..27474 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| HUS2011_RS27635 () | 27936..28436 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| HUS2011_RS27640 () | 29165..29599 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| HUS2011_RS27645 () | 29693..29959 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| HUS2011_RS27650 () | 30136..30525 | + | 390 | WP_000833766.1 | hypothetical protein | - |
| HUS2011_RS27655 () | 30522..31436 | + | 915 | WP_000038348.1 | Recombination-promoting nuclease RpnA | VF |
| HUS2011_RS27660 () | 31498..31704 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| HUS2011_RS27665 () | 31735..31986 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HUS2011_RS31920 () | 32020..32217 | - | 198 | WP_001161107.1 | hypothetical protein | - |
| HUS2011_RS27675 () | 32566..33414 | + | 849 | WP_001077053.1 | DUF4942 domain-containing protein | - |
| HUS2011_RS27680 () | 33501..33836 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HUS2011_RS27685 () | 34070..34402 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HUS2011_RS27690 () | 34413..37112 | + | 2700 | WP_001387486.1 | Protein TraI | Relaxase |
| HUS2011_RS27695 () | 37149..39440 | - | 2292 | WP_001289278.1 | conjugal transfer protein TrbC | - |
| HUS2011_RS27700 () | 39433..40503 | - | 1071 | WP_000151588.1 | IncI1-type conjugal transfer protein TrbB | - |
| HUS2011_RS27705 () | 40522..41730 | - | 1209 | WP_000121263.1 | hypothetical protein | VF |
| HUS2011_RS27710 () | 42037..43128 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 43331..43393 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43331..43393 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43331..43393 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43331..43393 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| HUS2011_RS27715 () | 43443..43595 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| HUS2011_RS27720 () | 43667..43918 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| HUS2011_RS27725 () | 44218..44514 | + | 297 | WP_001275298.1 | hypothetical protein | - |
| HUS2011_RS31775 () | 44579..44755 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| HUS2011_RS27740 () | 44938..45147 | - | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| HUS2011_RS27745 () | 45245..45859 | - | 615 | WP_000578648.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HUS2011_RS27750 () | 45935..48103 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| HUS2011_RS27755 () | 48200..48784 | - | 585 | WP_001037983.1 | IncI1-type conjugal transfer protein TraX | - |
| HUS2011_RS27760 () | 48813..50015 | - | 1203 | WP_001387490.1 | IncI1-type conjugal transfer protein TraW | - |
| HUS2011_RS27765 () | 49982..50596 | - | 615 | WP_000337395.1 | IncI1-type conjugal transfer protein TraV | - |
| HUS2011_RS27770 () | 50596..53640 | - | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| HUS2011_RS27775 () | 53730..54530 | - | 801 | WP_001164783.1 | IncI1-type conjugal transfer protein TraT | - |
| HUS2011_RS27780 () | 54514..54702 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| HUS2011_RS27785 () | 54766..55170 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| HUS2011_RS27790 () | 55221..55748 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HUS2011_RS27795 () | 55748..56452 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HUS2011_RS27800 () | 56452..57741 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| HUS2011_RS27805 () | 57744..58727 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| HUS2011_RS27810 () | 58738..59430 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| HUS2011_RS27815 () | 59427..59774 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HUS2011_RS27820 () | 59792..63556 | - | 3765 | WP_001141540.1 | DNA primase | - |
| HUS2011_RS27825 () | 63646..64197 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| HUS2011_RS28620 () | 64212..64502 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| HUS2011_RS27830 () | 64499..65647 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| HUS2011_RS27835 () | 65644..66462 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| HUS2011_RS27840 () | 66459..66917 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| HUS2011_RS27845 () | 67312..67896 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HUS2011_RS27850 () | 67956..69158 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| HUS2011_RS27855 () | 69244..70068 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| HUS2011_RS27860 () | 70219..71373 | - | 1155 | WP_001139956.1 | integrase | - |
| HUS2011_RS31925 () | 71943..72182 | + | 240 | WP_096058900.1 | prepilin | - |
| HUS2011_RS28630 () | 72179..72427 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| HUS2011_RS27875 () | 73063..74433 | - | 1371 | WP_001405478.1 | hypothetical protein | VF |
| HUS2011_RS27880 () | 74433..75089 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| HUS2011_RS27885 () | 75074..75634 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| HUS2011_RS27890 () | 75644..76258 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| HUS2011_RS27895 () | 76275..77360 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HUS2011_RS27900 () | 77373..78926 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HUS2011_RS27905 () | 78937..79389 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| HUS2011_RS27910 () | 79376..80671 | - | 1296 | WP_000752782.1 | type 4b pilus protein PilO2 | - |
| HUS2011_RS27915 () | 80664..82346 | - | 1683 | WP_000748144.1 | Outer membrane lipoprotein BfpB | VF |
| HUS2011_RS27920 () | 82360..82797 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| HUS2011_RS27925 () | 82797..83864 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| HUS2011_RS27930 () | 84911..85165 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| HUS2011_RS27935 () | 85337..86020 | - | 684 | WP_000213862.1 | conjugal transfer protein TraC | - |
| HUS2011_RS27940 () | 86274..86807 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| HUS2011_RS27945 () | 87249..87536 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| HUS2011_RS27950 () | 87454..87717 | - | 264 | WP_001387472.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|