MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 26269 bp
Accession: NC_022656 Location: 1..26269 Organism: Campylobacter coli 15-537360 Replicon: plasmid pCC42yr
Accession: NC_022656 Location: 1..26269 Organism: Campylobacter coli 15-537360 Replicon: plasmid pCC42yr
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N149_RS08435 () | 201..524 | + | 324 | WP_023361540.1 | hypothetical protein | - |
| N149_RS08440 () | 1235..2080 | + | 846 | WP_023361544.1 | hypothetical protein | - |
| N149_RS08445 () | 2077..2490 | + | 414 | WP_023361546.1 | type II toxin-antitoxin system VapC family toxin | - |
| N149_RS08450 () | 2989..3927 | + | 939 | WP_023361549.1 | Type IV secretion system protein PtlH | VF |
| N149_RS08455 () | 3937..4233 | + | 297 | WP_002784998.1 | TrbC/VirB2 family protein | - |
| N149_RS08460 () | 4233..4520 | + | 288 | WP_002779817.1 | VirB3 family type IV secretion system protein | - |
| N149_RS08465 () | 4524..6989 | + | 2466 | WP_002790710.1 | conjugal transfer protein TrbE | - |
| N149_RS08470 () | 6986..7657 | + | 672 | WP_002779815.1 | TrbM protein | - |
| N149_RS08475 () | 7669..8253 | + | 585 | WP_023361551.1 | Rha family transcriptional regulator | - |
| N149_RS08480 () | 8841..9635 | + | 795 | WP_023361553.1 | P-type conjugative transfer protein TrbJ | - |
| N149_RS08485 () | 9683..9952 | + | 270 | WP_023361555.1 | EexN family lipoprotein | - |
| N149_RS08490 () | 9837..11123 | + | 1287 | WP_079278985.1 | P-type conjugative transfer protein TrbL | - |
| N149_RS08495 () | 11143..11838 | + | 696 | WP_002790743.1 | conjugal transfer protein TrbF | - |
| N149_RS08500 () | 11849..13003 | + | 1155 | WP_023361559.1 | P-type conjugative transfer protein TrbG | - |
| N149_RS08505 () | 13000..13443 | + | 444 | WP_002779806.1 | hypothetical protein | - |
| N149_RS08510 () | 13447..14688 | + | 1242 | WP_002814341.1 | Type IV secretion system protein virB10 | VF |
| N149_RS08515 () | 14681..15226 | + | 546 | WP_002779804.1 | lytic transglycosylase domain-containing protein | - |
| N149_RS08520 () | 15323..15685 | + | 363 | WP_002779803.1 | single-stranded DNA-binding protein | - |
| N149_RS08755 () | 15672..15812 | + | 141 | WP_002779802.1 | hypothetical protein | - |
| N149_RS08525 () | 15817..18030 | + | 2214 | WP_002795783.1 | DUF1738 domain-containing protein | - |
| N149_RS08530 () | 18027..19850 | + | 1824 | WP_023361561.1 | Conjugal transfer protein TraG | VF |
| N149_RS08535 () | 19861..20580 | + | 720 | WP_023361563.1 | IncP-type DNA transfer protein TraL | - |
| N149_RS08540 () | 20671..20913 | + | 243 | WP_002804094.1 | hypothetical protein | Antitoxin Detail |
| N149_RS08545 () | 20906..21589 | + | 684 | WP_023361565.1 | Fic family protein | Toxin Detail |
| N149_RS08550 () | 21594..22061 | + | 468 | WP_002798254.1 | signal peptidase I | - |
| N149_RS08555 () | 22126..22521 | + | 396 | WP_002782959.1 | conjugal transfer protein TraM | - |
| N149_RS08560 () | 22613..23299 | + | 687 | WP_023361567.1 | Protein virC1 | VF |
| N149_RS08565 () | 23302..23526 | + | 225 | WP_002790621.1 | hypothetical protein | - |
| N149_RS08570 () | 23767..25923 | - | 2157 | WP_023361569.1 | Protein TraI | Relaxase |
| N149_RS08575 () | 25886..26269 | - | 384 | WP_002797386.1 | DNA transfer protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|