MGE detailed information
MGE type: Genomic_island MGE length: 48994 bp
Accession: NC_022364 Location: 4693160..4742153 Organism: Escherichia coli LY180 Replicon: chromosome
Accession: NC_022364 Location: 4693160..4742153 Organism: Escherichia coli LY180 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LY180_RS23180 () | 4689357..4690625 | + | 1269 | WP_001219046.1 | integrase arm-type DNA-binding domain-containing protein | - |
| LY180_RS23185 () | 4690841..4691716 | + | 876 | WP_000199891.1 | HNH endonuclease | - |
| LY180_RS23190 () | 4691794..4692759 | - | 966 | WP_001115625.1 | 5'-nucleotidase | - |
| LY180_RS23195 () | 4692901..4693167 | - | 267 | WP_001291041.1 | hypothetical protein | - |
| LY180_RS23200 () | 4693160..4694908 | - | 1749 | WP_000776118.1 | hypothetical protein | - |
| LY180_RS23205 () | 4695103..4696269 | - | 1167 | WP_015695627.1 | restriction endonuclease subunit S | - |
| LY180_RS23210 () | 4696278..4697912 | - | 1635 | WP_000627732.1 | type I restriction-modification system subunit M | - |
| LY180_RS23215 () | 4697976..4701389 | - | 3414 | WP_000438157.1 | DEAD/DEAH box helicase family protein | - |
| LY180_RS23220 () | 4701966..4702649 | + | 684 | WP_000856942.1 | WYL domain-containing protein | - |
| LY180_RS23225 () | 4702688..4703701 | + | 1014 | WP_000342612.1 | 50S ribosome-binding GTPase | - |
| LY180_RS23230 () | 4703714..4704478 | + | 765 | WP_000802556.1 | hypothetical protein | - |
| LY180_RS23235 () | 4704699..4704917 | - | 219 | WP_001064742.1 | AlpA family phage regulatory protein | - |
| LY180_RS23240 () | 4705035..4705649 | - | 615 | WP_000772909.1 | inovirus Gp2 family protein | - |
| LY180_RS23245 () | 4706242..4707195 | + | 954 | WP_000290405.1 | hypothetical protein | - |
| LY180_RS23250 () | 4707431..4708249 | + | 819 | WP_000761991.1 | DUF945 domain-containing protein | - |
| LY180_RS23255 () | 4708279..4708752 | + | 474 | WP_001292742.1 | DNA repair protein RadC | - |
| LY180_RS23260 () | 4708752..4709087 | + | 336 | WP_000939438.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LY180_RS23265 () | 4709118..4709459 | + | 342 | WP_000691790.1 | TA system toxin CbtA family protein | Toxin Detail |
| LY180_RS23270 () | 4709574..4710407 | + | 834 | WP_001192746.1 | DUF4942 domain-containing protein | - |
| LY180_RS23275 () | 4710477..4710872 | + | 396 | WP_000152741.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LY180_RS23280 () | 4710865..4711812 | + | 948 | WP_000342500.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LY180_RS23285 () | 4712205..4713470 | + | 1266 | WP_001218329.1 | Prophage integrase IntA ; Integrase | Integrase |
| LY180_RS23290 () | 4713671..4715140 | - | 1470 | WP_001022619.1 | Serine/threonine-protein kinase PrkC | VF |
| LY180_RS23295 () | 4715137..4715550 | - | 414 | WP_001368082.1 | hypothetical protein | - |
| LY180_RS23300 () | 4715687..4717372 | - | 1686 | WP_000323666.1 | ATP-binding protein | - |
| LY180_RS23305 () | 4717362..4718519 | - | 1158 | WP_001004904.1 | hypothetical protein | - |
| LY180_RS23310 () | 4718522..4719370 | - | 849 | WP_000092642.1 | hypothetical protein | - |
| LY180_RS23315 () | 4719381..4723667 | - | 4287 | WP_000007264.1 | hypothetical protein | - |
| LY180_RS23320 () | 4723664..4724950 | - | 1287 | WP_000377420.1 | hypothetical protein | - |
| LY180_RS23325 () | 4724968..4726494 | - | 1527 | WP_000357099.1 | hypothetical protein | - |
| LY180_RS23330 () | 4726494..4728641 | - | 2148 | Protein_4436 | N-6 DNA methylase | - |
| LY180_RS23335 () | 4728692..4729078 | - | 387 | WP_000148648.1 | hypothetical protein | - |
| LY180_RS23340 () | 4729075..4730418 | - | 1344 | WP_000504878.1 | McrC family protein | - |
| LY180_RS23345 () | 4730411..4732486 | - | 2076 | WP_000177023.1 | AAA family ATPase | - |
| LY180_RS23350 () | 4732656..4733528 | - | 873 | WP_000168572.1 | HNH endonuclease | - |
| LY180_RS25645 () | 4733610..4733732 | + | 123 | WP_001300013.1 | hypothetical protein | - |
| LY180_RS23355 () | 4733740..4734720 | - | 981 | WP_000991460.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| LY180_RS23360 () | 4734785..4735891 | - | 1107 | WP_001349986.1 | N-acetylneuraminate epimerase | - |
| LY180_RS23365 () | 4735911..4736627 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LY180_RS23380 () | 4738083..4738685 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| LY180_RS23385 () | 4739163..4739759 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| LY180_RS23395 () | 4740239..4740787 | + | 549 | WP_000695543.1 | Fimbrial subunit type 1 | VF |
| LY180_RS23400 () | 4740852..4741391 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| LY180_RS23405 () | 4741428..4742153 | + | 726 | WP_000066573.1 | Chaperone protein FimC | VF |
| LY180_RS23410 () | 4742220..4744856 | + | 2637 | WP_000120941.1 | fimbrial usher FimD | - |
| LY180_RS23415 () | 4744866..4745396 | + | 531 | WP_001244838.1 | type 1 fimbria minor subunit FimF | - |
| LY180_RS23420 () | 4745409..4745912 | + | 504 | WP_000872005.1 | type 1 fimbria minor subunit FimG | - |
| LY180_RS23425 () | 4745932..4746834 | + | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|