MGE detailed information
MGE type: Prophage MGE length: 48857 bp
Accession: NC_022364 Location: 1449698..1498554 Organism: Escherichia coli LY180 Replicon: chromosome
Accession: NC_022364 Location: 1449698..1498554 Organism: Escherichia coli LY180 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LY180_RS07080 () | 1445748..1446731 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| LY180_RS07090 () | 1447209..1448582 | + | 1374 | WP_000123740.1 | ATP-dependent RNA helicase DbpA | - |
| LY180_RS07095 () | 1448711..1449646 | - | 936 | WP_001157422.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| LY180_RS24505 () | 1449698..1450933 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| LY180_RS07105 () | 1450935..1451150 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| LY180_RS07110 () | 1451229..1451438 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1451254..1451432 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1451254..1451432 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1451254..1451432 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1451254..1451432 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| LY180_RS07115 () | 1451431..1451625 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| LY180_RS07120 () | 1451682..1452491 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| LY180_RS07125 () | 1452484..1455084 | - | 2601 | WP_000105152.1 | exodeoxyribonuclease VIII | - |
| LY180_RS07130 () | 1455186..1455461 | - | 276 | WP_001349884.1 | hypothetical protein | - |
| LY180_RS07135 () | 1455536..1455706 | - | 171 | WP_001349883.1 | hypothetical protein | - |
| LY180_RS07140 () | 1455706..1455927 | - | 222 | WP_000560220.1 | killing protein KilR | - |
| LY180_RS23955 () | 1456348..1456500 | - | 153 | WP_001169153.1 | DUF1391 family protein | - |
| LY180_RS23960 () | 1456931..1457350 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| LY180_RS07155 () | 1457430..1457684 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| LY180_RS07160 () | 1457681..1458103 | + | 423 | WP_000693802.1 | hypothetical protein | - |
| LY180_RS07165 () | 1458116..1458973 | + | 858 | WP_000899746.1 | DUF1376 domain-containing protein | - |
| LY180_RS07170 () | 1458980..1459726 | + | 747 | WP_000788973.1 | ATP-binding protein | - |
| LY180_RS07175 () | 1459749..1460510 | + | 762 | WP_000450660.1 | DUF1627 domain-containing protein | - |
| LY180_RS07180 () | 1460526..1460948 | + | 423 | WP_001151237.1 | DUF977 family protein | - |
| LY180_RS07185 () | 1461132..1462259 | + | 1128 | WP_000228824.1 | DUF262 domain-containing protein | - |
| LY180_RS07190 () | 1462252..1463361 | + | 1110 | WP_000569066.1 | DUF3696 domain-containing protein | - |
| LY180_RS07195 () | 1463358..1464335 | + | 978 | WP_000064766.1 | hypothetical protein | - |
| LY180_RS07205 () | 1464966..1465121 | + | 156 | WP_000813259.1 | type I toxin-antitoxin system Hok family toxin | - |
| LY180_RS07210 () | 1465590..1466189 | + | 600 | WP_000940320.1 | DUF1367 family protein | - |
| LY180_RS07215 () | 1466189..1466479 | + | 291 | WP_000228041.1 | DUF1364 domain-containing protein | - |
| LY180_RS07220 () | 1466476..1467012 | + | 537 | WP_000640164.1 | DUF1133 family protein | - |
| LY180_RS07235 () | 1468283..1468675 | + | 393 | WP_001349882.1 | holin | - |
| LY180_RS07240 () | 1468665..1468940 | + | 276 | WP_000950573.1 | phage holin family protein | - |
| LY180_RS07245 () | 1468943..1469320 | + | 378 | WP_000014545.1 | M15 family metallopeptidase | - |
| LY180_RS26265 () | 1469335..1469517 | + | 183 | WP_133301706.1 | hypothetical protein | - |
| LY180_RS07250 () | 1469922..1470710 | + | 789 | WP_001291099.1 | ParB/Srx family N-terminal domain-containing protein | - |
| LY180_RS07255 () | 1470703..1471635 | + | 933 | WP_001204039.1 | hypothetical protein | - |
| LY180_RS07260 () | 1471571..1471822 | + | 252 | WP_001307172.1 | hypothetical protein | - |
| LY180_RS07265 () | 1471826..1472917 | + | 1092 | WP_000089432.1 | terminase small subunit | - |
| LY180_RS07270 () | 1472907..1474235 | + | 1329 | WP_000021163.1 | terminase | - |
| LY180_RS07275 () | 1474254..1475690 | + | 1437 | WP_021036437.1 | DUF1073 domain-containing protein | - |
| LY180_RS07280 () | 1475635..1476468 | + | 834 | WP_001018386.1 | hypothetical protein | - |
| LY180_RS07285 () | 1476449..1477771 | + | 1323 | WP_000059667.1 | DUF2213 domain-containing protein | - |
| LY180_RS07290 () | 1477764..1478381 | + | 618 | WP_001349881.1 | hypothetical protein | - |
| LY180_RS07295 () | 1478396..1479424 | + | 1029 | WP_001272365.1 | hypothetical protein | - |
| LY180_RS07300 () | 1479482..1479952 | + | 471 | WP_000780861.1 | hypothetical protein | - |
| LY180_RS07305 () | 1479952..1480392 | + | 441 | WP_000175376.1 | hypothetical protein | - |
| LY180_RS07310 () | 1480389..1480829 | + | 441 | WP_000762302.1 | hypothetical protein | - |
| LY180_RS07315 () | 1480816..1481760 | + | 945 | WP_001139506.1 | hypothetical protein | - |
| LY180_RS07320 () | 1481760..1483097 | + | 1338 | WP_000506600.1 | hypothetical protein | - |
| LY180_RS07325 () | 1483121..1483552 | + | 432 | WP_000613371.1 | hypothetical protein | - |
| LY180_RS07330 () | 1483549..1484166 | + | 618 | WP_000703979.1 | hypothetical protein | - |
| LY180_RS07335 () | 1484230..1486218 | + | 1989 | WP_000016439.1 | transglycosylase SLT domain-containing protein | - |
| LY180_RS07340 () | 1486222..1486890 | + | 669 | WP_000056323.1 | hypothetical protein | - |
| LY180_RS07345 () | 1486887..1487153 | + | 267 | WP_000209259.1 | hypothetical protein | - |
| LY180_RS07350 () | 1487153..1488160 | + | 1008 | WP_001271172.1 | hypothetical protein | - |
| LY180_RS07355 () | 1488160..1488873 | + | 714 | WP_000063616.1 | phage baseplate protein | - |
| LY180_RS07365 () | 1489570..1489917 | + | 348 | WP_001261334.1 | hypothetical protein | - |
| LY180_RS24520 () | 1489893..1490252 | - | 360 | Protein_1404 | antA/AntB antirepressor family protein | - |
| LY180_RS07375 () | 1490308..1490847 | - | 540 | WP_000733802.1 | hypothetical protein | - |
| LY180_RS24525 () | 1490869..1492095 | + | 1227 | WP_001349878.1 | baseplate J/gp47 family protein | - |
| LY180_RS07385 () | 1492079..1492705 | + | 627 | WP_001199732.1 | hypothetical protein | - |
| LY180_RS07390 () | 1492702..1494255 | + | 1554 | WP_000600270.1 | hypothetical protein | - |
| LY180_RS07395 () | 1494258..1494803 | + | 546 | WP_000902859.1 | tail fiber assembly protein | - |
| LY180_RS07400 () | 1494827..1497967 | + | 3141 | WP_000117760.1 | prophage tail fiber N-terminal domain-containing protein | - |
| LY180_RS07405 () | 1497982..1498554 | + | 573 | WP_000701877.1 | DUF4376 domain-containing protein | - |
| LY180_RS07410 () | 1499094..1499528 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| LY180_RS07415 () | 1499669..1500802 | - | 1134 | WP_000837909.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|