MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 67109 bp
Accession: NC_022237 Location: 642560..709668 Organism: Streptococcus intermedius C270 Replicon: chromosome
Accession: NC_022237 Location: 642560..709668 Organism: Streptococcus intermedius C270 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SII_RS03235 () | 640499..640813 | + | 315 | WP_000420682.1 | YdcP family protein | - |
| SII_RS03240 () | 640829..641215 | + | 387 | WP_000985015.1 | YdcP family protein | - |
| SII_RS03245 () | 641244..642629 | + | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| SII_RS09675 () | 642632..642784 | + | 153 | WP_000879507.1 | hypothetical protein | - |
| SII_RS03250 () | 642807..644225 | + | 1419 | WP_001815707.1 | replication initiation factor domain-containing protein | - |
| SII_RS03255 () | 644274..644357 | + | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| SII_RS03260 () | 644482..645219 | + | 738 | WP_001038795.1 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | - |
| SII_RS03265 () | 645476..646723 | - | 1248 | WP_000019067.1 | ISL3 family transposase | - |
| SII_RS03270 () | 646903..647124 | + | 222 | WP_001009056.1 | hypothetical protein | - |
| SII_RS03275 () | 647241..647738 | + | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| SII_RS03280 () | 647713..648219 | + | 507 | WP_000506270.1 | conjugal transfer protein | - |
| SII_RS03285 () | 648203..650650 | + | 2448 | WP_000331160.1 | ATP-binding protein | - |
| SII_RS03290 () | 650653..653634 | + | 2982 | WP_080654274.1 | conjugal transfer protein | - |
| SII_RS09680 () | 653879..653995 | + | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| SII_RS03295 () | 654011..655930 | + | 1920 | WP_020998529.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| SII_RS09685 () | 656049..656216 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| SII_RS03305 () | 656276..656629 | - | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| SII_RS03310 () | 657134..657556 | + | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| SII_RS03315 () | 657553..657783 | + | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| SII_RS03320 () | 658244..658447 | + | 204 | WP_000814511.1 | excisionase | - |
| SII_RS03325 () | 658529..659746 | + | 1218 | WP_001291561.1 | tyrosine-type recombinase/integrase | - |
| SII_RS03335 () | 660462..660872 | + | 411 | WP_020998530.1 | thrombospondin type 3 repeat-containing protein | - |
| SII_RS03340 () | 660920..667132 | + | 6213 | WP_020998531.1 | DEAD/DEAH box helicase family protein | - |
| SII_RS03345 () | 667207..667491 | + | 285 | WP_020998532.1 | hypothetical protein | - |
| SII_RS03350 () | 667505..667801 | + | 297 | WP_041823157.1 | hypothetical protein | - |
| SII_RS03355 () | 667815..668012 | - | 198 | WP_001842085.1 | hypothetical protein | - |
| SII_RS03360 () | 668172..668813 | + | 642 | WP_020998534.1 | hypothetical protein | - |
| SII_RS03365 () | 668823..669908 | + | 1086 | WP_020998535.1 | toprim domain-containing protein | - |
| SII_RS03370 () | 669959..670192 | + | 234 | WP_000152419.1 | hypothetical protein | - |
| SII_RS03375 () | 670189..670572 | + | 384 | WP_020998536.1 | hypothetical protein | - |
| SII_RS03380 () | 670610..670882 | + | 273 | WP_020998537.1 | hypothetical protein | - |
| SII_RS03385 () | 670952..671428 | + | 477 | WP_041823159.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SII_RS03390 () | 671428..672189 | + | 762 | WP_020998538.1 | zeta toxin family protein | Toxin Detail |
| SII_RS03395 () | 672217..674715 | + | 2499 | WP_020998539.1 | AAA family ATPase | - |
| SII_RS03400 () | 675639..675995 | + | 357 | WP_020998540.1 | hypothetical protein | - |
| SII_RS03405 () | 676000..676365 | + | 366 | WP_000401235.1 | plasmid mobilization relaxosome protein MobC | - |
| SII_RS03410 () | 676352..678181 | + | 1830 | WP_020998541.1 | relaxase/mobilization nuclease domain-containing protein | - |
| SII_RS03415 () | 678285..678512 | + | 228 | WP_020998542.1 | helix-turn-helix domain-containing protein | - |
| SII_RS03420 () | 678782..679051 | + | 270 | WP_000450956.1 | DUF3173 family protein | - |
| SII_RS03425 () | 679023..680210 | + | 1188 | WP_020998543.1 | site-specific integrase | - |
| SII_RS03435 () | 680677..681702 | + | 1026 | WP_020998544.1 | radical SAM protein | - |
| SII_RS03440 () | 681686..683215 | + | 1530 | WP_020998545.1 | ABC transporter ATP-binding protein/permease | - |
| SII_RS03445 () | 683543..684184 | + | 642 | WP_020998546.1 | hypothetical protein | - |
| SII_RS03450 () | 684194..684692 | + | 499 | Protein_655 | hypothetical protein | - |
| SII_RS03455 () | 684665..685402 | + | 738 | WP_051148145.1 | hypothetical protein | - |
| SII_RS03460 () | 685556..687130 | + | 1575 | WP_020998547.1 | ABC transporter ATP-binding protein/permease | - |
| SII_RS03465 () | 687370..687888 | + | 519 | WP_020998548.1 | ribosome maturation factor RimM | - |
| SII_RS03470 () | 687878..688612 | + | 735 | WP_020998549.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| SII_RS03475 () | 688732..689655 | + | 924 | WP_020998550.1 | zinc ABC transporter substrate-binding protein | - |
| SII_RS03480 () | 689666..692239 | + | 2574 | WP_020998551.1 | pneumococcal-type histidine triad protein | - |
| SII_RS03485 () | 692555..693181 | + | 627 | WP_020998552.1 | SAP domain-containing protein | - |
| SII_RS03490 () | 693178..693795 | + | 618 | WP_020998553.1 | class I SAM-dependent methyltransferase | - |
| SII_RS03495 () | 693805..694431 | + | 627 | Protein_664 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| SII_RS03500 () | 694541..694951 | + | 411 | WP_020998555.1 | helix-turn-helix domain-containing protein | - |
| SII_RS03505 () | 694968..696059 | + | 1092 | WP_080654275.1 | alpha/beta hydrolase | - |
| SII_RS03510 () | 696190..696687 | + | 498 | WP_020998557.1 | GAF domain-containing protein | - |
| SII_RS03515 () | 696687..698351 | + | 1665 | WP_020998558.1 | DNA polymerase III subunit gamma/tau | - |
| SII_RS03520 () | 698390..698584 | + | 195 | WP_003072499.1 | DUF3272 family protein | - |
| SII_RS03525 () | 698733..699668 | - | 936 | WP_020998559.1 | bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor | - |
| SII_RS03530 () | 699671..700672 | - | 1002 | WP_020998560.1 | LacI family DNA-binding transcriptional regulator | - |
| SII_RS03535 () | 700910..702088 | + | 1179 | WP_020998561.1 | galactokinase | - |
| SII_RS03540 () | 702161..703642 | + | 1482 | WP_020998562.1 | UDP-glucose--hexose-1-phosphate uridylyltransferase | - |
| SII_RS09705 () | 703897..704031 | + | 135 | WP_003024272.1 | DUF4044 domain-containing protein | - |
| SII_RS03545 () | 704089..705399 | + | 1311 | WP_020998563.1 | GTPase ObgE | - |
| SII_RS10100 () | 705414..705575 | + | 162 | WP_020998564.1 | hypothetical protein | - |
| SII_RS03555 () | 705608..706558 | - | 951 | WP_020998565.1 | polysaccharide deacetylase family protein | - |
| SII_RS03560 () | 706743..708029 | + | 1287 | WP_020998566.1 | homoserine dehydrogenase | - |
| SII_RS03565 () | 708031..708897 | + | 867 | WP_020998567.1 | homoserine kinase | - |
| SII_RS03570 () | 709016..709945 | + | 930 | WP_020998568.1 | hypothetical protein | - |
| SII_RS03575 () | 710096..711424 | + | 1329 | WP_009568743.1 | PTS sugar transporter subunit IIC | - |
| SII_RS03580 () | 711417..712259 | + | 843 | WP_003072532.1 | alpha/beta hydrolase | - |
| SII_RS03585 () | 712735..713973 | + | 1239 | WP_020998569.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|