MGE detailed information
MGE type: Integron MGE length: 58365 bp
Accession: NC_021847 Location: 2272433..2330797 Organism: Vibrio parahaemolyticus O1:Kuk str. FDA R31 Replicon: chromosome
Accession: NC_021847 Location: 2272433..2330797 Organism: Vibrio parahaemolyticus O1:Kuk str. FDA R31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HK86_RS10510 () | 2267539..2267781 | + | 243 | WP_020840784.1 | hypothetical protein | - |
| HK86_RS24105 () | 2267993..2268661 | - | 669 | WP_079854942.1 | TfoX/Sxy family DNA transformation protein | - |
| HK86_RS26130 () | 2268864..2269121 | - | 258 | WP_069539011.1 | hypothetical protein | - |
| HK86_RS10520 () | 2269349..2270599 | - | 1251 | WP_020840786.1 | virulence-associated protein E | - |
| HK86_RS10525 () | 2270592..2270834 | - | 243 | WP_020840787.1 | DNA-binding protein | - |
| HK86_RS10530 () | 2270925..2272052 | - | 1128 | WP_020840788.1 | hypothetical protein | - |
| HK86_RS10535 () | 2272125..2272475 | - | 351 | Protein_1997 | site-specific integrase | - |
| HK86_RS10540 () | 2272433..2273695 | - | 1263 | WP_020840790.1 | hypothetical protein | - |
| HK86_RS24770 () | 2273726..2273815 | - | 90 | WP_079855372.1 | DUF3265 domain-containing protein | - |
| HK86_RS10545 () | 2273833..2274111 | - | 279 | WP_020840791.1 | hypothetical protein | - |
| HK86_RS10550 () | 2274310..2274687 | - | 378 | WP_020840792.1 | hypothetical protein | - |
| HK86_RS10555 () | 2275315..2276037 | - | 723 | WP_139128343.1 | leucine-rich repeat domain-containing protein | - |
| HK86_RS10560 () | 2276066..2276560 | - | 495 | WP_020840794.1 | GNAT family N-acetyltransferase | - |
| HK86_RS10565 () | 2277293..2278333 | - | 1041 | WP_069539010.1 | hypothetical protein | - |
| HK86_RS10570 () | 2278500..2279090 | - | 591 | WP_023623412.1 | cold shock and DUF1294 domain-containing protein | - |
| HK86_RS24785 () | 2279602..2279691 | - | 90 | WP_079855371.1 | DUF3265 domain-containing protein | - |
| HK86_RS10575 () | 2279709..2280050 | - | 342 | WP_020840797.1 | hypothetical protein | - |
| HK86_RS10580 () | 2280176..2280997 | - | 822 | WP_020840798.1 | DUF2002 family protein | - |
| HK86_RS24790 () | 2281028..2281120 | - | 93 | WP_079854959.1 | DUF3265 domain-containing protein | - |
| HK86_RS10585 () | 2281158..2281796 | - | 639 | WP_020840799.1 | class I SAM-dependent methyltransferase | - |
| HK86_RS10590 () | 2281929..2282450 | - | 522 | WP_020840800.1 | hypothetical protein | - |
| HK86_RS24795 () | 2282487..2282564 | - | 78 | WP_079751608.1 | DUF3265 domain-containing protein | - |
| HK86_RS10595 () | 2282619..2282945 | - | 327 | WP_041170649.1 | hypothetical protein | - |
| HK86_RS26145 () | 2282977..2283069 | - | 93 | Protein_2014 | DUF3265 domain-containing protein | - |
| HK86_RS10600 () | 2283097..2283342 | - | 246 | WP_020840802.1 | DUF2442 domain-containing protein | - |
| HK86_RS10605 () | 2283320..2283640 | - | 321 | WP_020840803.1 | DUF4160 domain-containing protein | - |
| HK86_RS10610 () | 2284344..2284922 | - | 579 | WP_020840805.1 | hypothetical protein | - |
| HK86_RS24805 () | 2284951..2285088 | - | 138 | WP_080212135.1 | DUF3265 domain-containing protein | - |
| HK86_RS10615 () | 2285058..2285678 | - | 621 | WP_139128335.1 | hypothetical protein | - |
| HK86_RS26150 () | 2286619..2286786 | - | 168 | WP_089190283.1 | DUF3265 domain-containing protein | - |
| HK86_RS26915 () | 2287059..2287148 | - | 90 | Protein_2021 | DUF3265 domain-containing protein | - |
| HK86_RS10630 () | 2287166..2287474 | - | 309 | WP_020840808.1 | hypothetical protein | - |
| HK86_RS24810 () | 2287986..2288075 | - | 90 | WP_079857916.1 | DUF3265 domain-containing protein | - |
| HK86_RS10640 () | 2289304..2290092 | - | 789 | WP_020840810.1 | hypothetical protein | - |
| HK86_RS10645 () | 2290242..2291024 | - | 783 | WP_020840811.1 | DUF4393 domain-containing protein | - |
| HK86_RS26920 () | 2291068..2291157 | - | 90 | Protein_2026 | DUF3265 domain-containing protein | - |
| HK86_RS24825 () | 2291678..2291821 | - | 144 | WP_080212137.1 | DUF3265 domain-containing protein | - |
| HK86_RS26785 () | 2291785..2292111 | - | 327 | WP_020840813.1 | hypothetical protein | - |
| HK86_RS10660 () | 2292763..2293251 | - | 489 | WP_020840814.1 | hypothetical protein | - |
| HK86_RS10665 () | 2293366..2294370 | - | 1005 | WP_020840815.1 | LD-carboxypeptidase | - |
| HK86_RS24835 () | 2294415..2294507 | - | 93 | WP_079855431.1 | DUF3265 domain-containing protein | - |
| HK86_RS10670 () | 2294522..2294833 | - | 312 | WP_020840816.1 | hypothetical protein | - |
| HK86_RS10675 () | 2295042..2295485 | - | 444 | WP_020840817.1 | SMI1/KNR4 family protein | - |
| HK86_RS10680 () | 2295643..2295894 | - | 252 | Protein_2034 | hypothetical protein | - |
| HK86_RS10690 () | 2295959..2297109 | + | 1151 | WP_123767444.1 | IS3 family transposase ISVpa2 | Transposase |
| HK86_RS10695 () | 2297138..2297536 | - | 399 | Protein_2036 | GNAT family N-acetyltransferase | - |
| HK86_RS24840 () | 2297564..2297656 | - | 93 | WP_074534780.1 | DUF3265 domain-containing protein | - |
| HK86_RS10700 () | 2297797..2298018 | + | 222 | WP_020840820.1 | hypothetical protein | - |
| HK86_RS10705 () | 2298206..2298862 | - | 657 | WP_020840821.1 | hypothetical protein | - |
| HK86_RS26925 () | 2298896..2298988 | - | 93 | WP_079400729.1 | DUF3265 domain-containing protein | - |
| HK86_RS10715 () | 2299347..2299871 | - | 525 | WP_020840823.1 | hypothetical protein | - |
| HK86_RS10720 () | 2300092..2300514 | - | 423 | WP_020840824.1 | hypothetical protein | - |
| HK86_RS26185 () | 2300594..2300779 | - | 186 | Protein_2043 | hypothetical protein | - |
| HK86_RS24850 () | 2301153..2301245 | - | 93 | WP_074050578.1 | DUF3265 domain-containing protein | - |
| HK86_RS10730 () | 2301260..2301769 | - | 510 | WP_020840826.1 | hypothetical protein | - |
| HK86_RS24855 () | 2301779..2301901 | - | 123 | WP_144077963.1 | DUF3265 domain-containing protein | - |
| HK86_RS10735 () | 2301898..2302422 | - | 525 | WP_020840827.1 | GNAT family N-acetyltransferase | - |
| HK86_RS24860 () | 2302449..2302541 | - | 93 | WP_005494820.1 | DUF3265 domain-containing protein | - |
| HK86_RS10740 () | 2302556..2303134 | - | 579 | WP_139128362.1 | hypothetical protein | - |
| HK86_RS24865 () | 2303146..2303235 | - | 90 | WP_079758050.1 | DUF3265 domain-containing protein | - |
| HK86_RS26705 () | 2303364..2303657 | + | 294 | WP_158500695.1 | hypothetical protein | - |
| HK86_RS24870 () | 2303757..2303846 | - | 90 | WP_079880741.1 | DUF3265 domain-containing protein | - |
| HK86_RS10750 () | 2303875..2304285 | - | 411 | WP_020840830.1 | GFA family protein | - |
| HK86_RS26930 () | 2304340..2304432 | - | 93 | WP_072605894.1 | DUF3265 domain-containing protein | - |
| HK86_RS10755 () | 2304455..2305111 | - | 657 | WP_020840831.1 | site-specific DNA-methyltransferase | - |
| HK86_RS24880 () | 2305119..2305400 | - | 282 | WP_053306554.1 | hypothetical protein | - |
| HK86_RS24885 () | 2305487..2305609 | - | 123 | WP_079763903.1 | DUF3265 domain-containing protein | - |
| HK86_RS10760 () | 2305619..2305840 | - | 222 | WP_017420735.1 | VF530 family protein | - |
| HK86_RS26190 () | 2305981..2306148 | - | 168 | WP_089190283.1 | DUF3265 domain-containing protein | - |
| HK86_RS24890 () | 2306421..2306531 | - | 111 | WP_103186353.1 | DUF3265 domain-containing protein | - |
| HK86_RS10770 () | 2306528..2306956 | - | 429 | WP_069539009.1 | hypothetical protein | - |
| HK86_RS24895 () | 2306985..2307077 | - | 93 | WP_005377014.1 | DUF3265 domain-containing protein | - |
| HK86_RS10775 () | 2307100..2308326 | - | 1227 | WP_020840834.1 | hypothetical protein | - |
| HK86_RS10780 () | 2308946..2309218 | - | 273 | WP_020840835.1 | DUF4282 domain-containing protein | - |
| HK86_RS24905 () | 2309388..2309480 | - | 93 | WP_200859575.1 | DUF3265 domain-containing protein | - |
| HK86_RS10785 () | 2309495..2309839 | - | 345 | WP_041170651.1 | hypothetical protein | - |
| HK86_RS24910 () | 2309872..2309961 | - | 90 | WP_077672880.1 | DUF3265 domain-containing protein | - |
| HK86_RS10790 () | 2310598..2311344 | - | 747 | WP_020840837.1 | serine protease | - |
| HK86_RS24915 () | 2311373..2311450 | - | 78 | WP_074190210.1 | DUF3265 domain-containing protein | - |
| HK86_RS10805 () | 2312533..2312982 | - | 450 | WP_139148884.1 | hypothetical protein | - |
| HK86_RS10810 () | 2313213..2313554 | - | 342 | WP_020840840.1 | hypothetical protein | - |
| HK86_RS24925 () | 2313582..2313674 | - | 93 | WP_079855370.1 | DUF3265 domain-containing protein | - |
| HK86_RS10815 () | 2313719..2314705 | - | 987 | WP_020840841.1 | hypothetical protein | - |
| HK86_RS24930 () | 2314763..2314855 | - | 93 | WP_005448238.1 | DUF3265 domain-containing protein | - |
| HK86_RS10820 () | 2314870..2315643 | - | 774 | WP_020840842.1 | NERD domain-containing protein | - |
| HK86_RS10825 () | 2316328..2316939 | - | 612 | WP_020840843.1 | hypothetical protein | - |
| HK86_RS24935 () | 2317452..2317544 | - | 93 | WP_079854961.1 | DUF3265 domain-containing protein | - |
| HK86_RS10835 () | 2317569..2318489 | - | 921 | WP_020840845.1 | hypothetical protein | - |
| HK86_RS10840 () | 2318635..2319162 | - | 528 | WP_139128359.1 | hypothetical protein | - |
| HK86_RS10845 () | 2319219..2319992 | - | 774 | WP_020840847.1 | hypothetical protein | - |
| HK86_RS24945 () | 2320509..2320601 | - | 93 | WP_079855402.1 | DUF3265 domain-containing protein | - |
| HK86_RS10850 () | 2320629..2321198 | - | 570 | WP_020840848.1 | hypothetical protein | - |
| HK86_RS10855 () | 2321402..2321863 | - | 462 | WP_020840849.1 | hypothetical protein | - |
| HK86_RS24950 () | 2321951..2322043 | - | 93 | WP_079855392.1 | DUF3265 domain-containing protein | - |
| HK86_RS10860 () | 2322074..2322652 | - | 579 | WP_020840850.1 | hypothetical protein | - |
| HK86_RS24955 () | 2324195..2324287 | - | 93 | WP_080212138.1 | DUF3265 domain-containing protein | - |
| HK86_RS10865 () | 2324302..2325048 | - | 747 | WP_020840851.1 | hypothetical protein | - |
| HK86_RS10870 () | 2325191..2325769 | - | 579 | WP_041170655.1 | hypothetical protein | - |
| HK86_RS26225 () | 2325787..2325915 | - | 129 | WP_139148886.1 | DUF3265 domain-containing protein | - |
| HK86_RS24965 () | 2326371..2326463 | - | 93 | WP_079881687.1 | DUF3265 domain-containing protein | - |
| HK86_RS10880 () | 2326491..2326778 | - | 288 | WP_005445239.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HK86_RS10885 () | 2326775..2327056 | - | 282 | WP_000086647.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HK86_RS24970 () | 2327147..2327257 | - | 111 | WP_162471500.1 | DUF3265 domain-containing protein | - |
| HK86_RS10890 () | 2327254..2327787 | - | 534 | WP_020840854.1 | hypothetical protein | - |
| HK86_RS10895 () | 2327942..2328520 | - | 579 | WP_041170655.1 | hypothetical protein | - |
| HK86_RS24975 () | 2329103..2329213 | - | 111 | WP_079857913.1 | DUF3265 domain-containing protein | - |
| HK86_RS10900 () | 2329835..2330797 | + | 963 | WP_041170703.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HK86_RS10905 () | 2330848..2331321 | - | 474 | WP_020840857.1 | DUF2947 domain-containing protein | - |
| HK86_RS10910 () | 2331335..2331922 | - | 588 | WP_020840858.1 | HD domain-containing protein | - |
| HK86_RS10915 () | 2331924..2332508 | - | 585 | WP_005458831.1 | ribosomal protein S5-alanine N-acetyltransferase | - |
| HK86_RS10920 () | 2332545..2334089 | - | 1545 | WP_020840859.1 | transcriptional regulator TyrR | - |
| HK86_RS10925 () | 2334190..2335230 | - | 1041 | WP_020840860.1 | YcjF family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|