MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 75721 bp
Accession: NC_021594 Location: 1..75721 Organism: Serratia plymuthica 4Rx13 Replicon: plasmid p75
Accession: NC_021594 Location: 1..75721 Organism: Serratia plymuthica 4Rx13 Replicon: plasmid p75
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SOD_RS24315 () | 101..943 | + | 843 | WP_004953874.1 | ParA family protein | - |
| SOD_RS24320 () | 948..2105 | + | 1158 | WP_004953876.1 | ParB/RepB/Spo0J family partition protein | - |
| SOD_RS24325 () | 2106..2534 | + | 429 | Protein_3 | hypothetical protein | - |
| SOD_RS24330 () | 2927..4252 | + | 1326 | WP_004953880.1 | hypothetical protein | - |
| SOD_RS24335 () | 4443..5306 | - | 864 | WP_004953881.1 | hypothetical protein | - |
| SOD_RS24340 () | 5666..6310 | + | 645 | WP_004953884.1 | methylase | - |
| SOD_RS24345 () | 6325..6546 | + | 222 | WP_041417416.1 | hypothetical protein | - |
| SOD_RS24350 () | 6968..7393 | + | 426 | WP_006322811.1 | antirestriction protein | - |
| SOD_RS24355 () | 7448..7852 | + | 405 | WP_006322810.1 | DUF1380 family protein | - |
| SOD_RS24365 () | 8761..9051 | + | 291 | WP_037430046.1 | hypothetical protein | - |
| SOD_RS24370 () | 9138..11183 | + | 2046 | WP_004953887.1 | ParB/RepB/Spo0J family partition protein | - |
| SOD_RS24375 () | 11224..11688 | + | 465 | WP_004953890.1 | conjugation system SOS inhibitor PsiB | - |
| SOD_RS24380 () | 11685..12416 | + | 732 | WP_004953894.1 | plasmid SOS inhibition protein A | - |
| SOD_RS24385 () | 12489..12848 | + | 360 | WP_041417418.1 | hypothetical protein | - |
| SOD_RS24395 () | 13133..13366 | - | 234 | WP_037430037.1 | DNA polymerase III subunit theta | - |
| SOD_RS24400 () | 13924..14370 | + | 447 | WP_020453968.1 | hypothetical protein | - |
| SOD_RS24405 () | 14466..14717 | + | 252 | WP_004953896.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SOD_RS24410 () | 14714..15001 | + | 288 | WP_041417419.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SOD_RS24415 () | 15043..15276 | + | 234 | WP_037430034.1 | hypothetical protein | - |
| SOD_RS24420 () | 15966..16385 | + | 420 | WP_020453969.1 | hypothetical protein | - |
| SOD_RS24425 () | 16422..16772 | + | 351 | WP_020453970.1 | hypothetical protein | - |
| SOD_RS24430 () | 16859..17119 | + | 261 | WP_041417420.1 | hypothetical protein | - |
| SOD_RS24435 () | 17313..17951 | + | 639 | WP_041417439.1 | N-6 DNA methylase | - |
| SOD_RS24440 () | 17987..18214 | + | 228 | WP_037430031.1 | hypothetical protein | - |
| SOD_RS24445 () | 18804..19247 | + | 444 | WP_006322790.1 | hypothetical protein | - |
| SOD_RS24450 () | 19969..20250 | + | 282 | WP_041417422.1 | DUF905 family protein | - |
| SOD_RS24455 () | 20332..21186 | + | 855 | WP_004953901.1 | hypothetical protein | - |
| SOD_RS24460 () | 21252..21770 | - | 519 | WP_071824765.1 | hypothetical protein | VF |
| SOD_RS24465 () | 22368..22766 | + | 399 | WP_020453971.1 | relaxosome protein TraM | - |
| SOD_RS24470 () | 22838..23137 | - | 300 | WP_051170117.1 | Arc family DNA-binding protein | - |
| SOD_RS24790 () | 23336..23668 | + | 333 | WP_020453972.1 | protein TraE | - |
| SOD_RS24480 () | 23679..23981 | + | 303 | WP_037430027.1 | type IV conjugative transfer system protein TraL | - |
| SOD_RS24485 () | 23991..24566 | + | 576 | WP_020453973.1 | protein TraE | - |
| SOD_RS24490 () | 24599..25348 | + | 750 | WP_041417423.1 | type-F conjugative transfer system secretin TraK | - |
| SOD_RS24495 () | 25348..26742 | + | 1395 | WP_020453974.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| SOD_RS24500 () | 26905..27213 | + | 309 | WP_155243345.1 | hypothetical protein | - |
| SOD_RS24505 () | 27341..27577 | + | 237 | WP_037430018.1 | hypothetical protein | - |
| SOD_RS24510 () | 27653..28222 | + | 570 | WP_020453975.1 | type IV conjugative transfer system lipoprotein TraV | - |
| SOD_RS24515 () | 28237..30843 | + | 2607 | WP_110605974.1 | type IV secretion system protein TraC | - |
| SOD_RS24520 () | 30903..31253 | + | 351 | WP_110605975.1 | type-F conjugative transfer system protein TrbI | - |
| SOD_RS24525 () | 31250..31876 | + | 627 | WP_004953913.1 | type-F conjugative transfer system protein TraW | - |
| SOD_RS24530 () | 31873..32868 | + | 996 | WP_004953915.1 | conjugal transfer pilus assembly protein TraU | - |
| SOD_RS24535 () | 32880..33485 | + | 606 | WP_006322777.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| SOD_RS25950 () | 34397..35506 | + | 1110 | Protein_44 | conjugal transfer protein TraN | - |
| SOD_RS24545 () | 35503..36288 | + | 786 | WP_004953823.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| SOD_RS25955 () | 36341..36733 | + | 393 | WP_110605969.1 | hypothetical protein | - |
| SOD_RS24550 () | 36726..36911 | + | 186 | WP_037430006.1 | hypothetical protein | - |
| SOD_RS24555 () | 36922..37152 | + | 231 | WP_041417427.1 | hypothetical protein | - |
| SOD_RS24560 () | 37149..37712 | + | 564 | WP_020453979.1 | conjugal transfer protein TrbB | - |
| SOD_RS24565 () | 37709..38428 | + | 720 | WP_004953826.1 | hypothetical protein | - |
| SOD_RS24570 () | 38418..39791 | + | 1374 | WP_110605976.1 | conjugal transfer protein TraH | - |
| SOD_RS24575 () | 39793..42666 | + | 2874 | WP_020453981.1 | conjugal transfer mating pair stabilization protein TraG | - |
| SOD_RS24580 () | 42669..43550 | + | 882 | WP_004953834.1 | hypothetical protein | - |
| SOD_RS24585 () | 43580..44326 | + | 747 | WP_004953837.1 | hypothetical protein | - |
| SOD_RS24590 () | 44434..46794 | + | 2361 | WP_004953840.1 | type IV conjugative transfer system coupling protein TraD | - |
| SOD_RS24595 () | 46791..52076 | + | 5286 | WP_004953842.1 | Multifunctional conjugation protein TraI | Relaxase |
| SOD_RS24600 () | 52117..52605 | + | 489 | WP_041417442.1 | Phospholipase D | VF |
| SOD_RS24605 () | 52885..53943 | + | 1059 | WP_110605970.1 | Replication protein | - |
| SOD_RS24610 () | 54868..55611 | - | 744 | WP_037430059.1 | replication initiation protein RepE | - |
| SOD_RS24615 () | 56313..56858 | - | 546 | WP_020453983.1 | hypothetical protein | - |
| SOD_RS24620 () | 57006..57833 | - | 828 | WP_004953848.1 | conjugal transfer protein TraX | - |
| SOD_RS24625 () | 58854..59108 | - | 255 | WP_041417429.1 | hypothetical protein | - |
| SOD_RS24630 () | 59333..59530 | + | 198 | WP_041417430.1 | hypothetical protein | - |
| SOD_RS24635 () | 59630..60816 | + | 1187 | Protein_64 | hypothetical protein | - |
| SOD_RS24640 () | 60908..62170 | - | 1263 | WP_004953852.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| SOD_RS24645 () | 62178..62591 | - | 414 | WP_020453985.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| SOD_RS24650 () | 62823..63686 | - | 864 | WP_004953856.1 | tyrosine-type recombinase/integrase | - |
| SOD_RS25635 () | 63679..64128 | - | 450 | WP_020453986.1 | hypothetical protein | - |
| SOD_RS24660 () | 64309..64995 | - | 687 | WP_041417432.1 | SOS response-associated peptidase family protein | - |
| SOD_RS24665 () | 65138..65548 | - | 411 | WP_020453987.1 | hypothetical protein | - |
| SOD_RS25520 () | 65830..66738 | - | 909 | WP_004953861.1 | Abi family protein | - |
| SOD_RS24670 () | 67480..68400 | - | 921 | WP_004953864.1 | ankyrin repeat domain-containing protein | - |
| SOD_RS24675 () | 69117..69425 | + | 309 | WP_041417434.1 | hypothetical protein | - |
| SOD_RS24680 () | 69488..70147 | + | 660 | WP_020453988.1 | hypothetical protein | - |
| SOD_RS24685 () | 70214..71056 | + | 843 | WP_020453989.1 | GIY-YIG nuclease family protein | - |
| SOD_RS24700 () | 72915..73094 | + | 180 | WP_037429924.1 | hypothetical protein | - |
| SOD_RS24705 () | 73130..73405 | + | 276 | WP_147150522.1 | hypothetical protein | - |
| SOD_RS24710 () | 73415..73630 | + | 216 | WP_037429928.1 | hypothetical protein | - |
| SOD_RS24715 () | 73632..74426 | + | 795 | WP_004953869.1 | tyrosine-type recombinase/integrase | - |
| SOD_RS24720 () | 74517..75185 | + | 669 | WP_004953871.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|