MGE detailed information
MGE type: Genomic_island MGE length: 25803 bp
Accession: NC_021591 Location: 465094..490896 Organism: Serratia plymuthica 4Rx13 Replicon: chromosome
Accession: NC_021591 Location: 465094..490896 Organism: Serratia plymuthica 4Rx13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SOD_RS02145 () | 460571..461377 | - | 807 | WP_004953003.1 | transglutaminase family protein | - |
| SOD_RS02150 () | 461374..462302 | - | 929 | Protein_409 | alpha-E domain-containing protein | - |
| SOD_RS02155 () | 462296..463732 | - | 1437 | WP_020438356.1 | circularly permuted type 2 ATP-grasp protein | - |
| SOD_RS02160 () | 464008..464394 | - | 387 | WP_004953012.1 | 2-iminobutanoate/2-iminopropanoate deaminase | - |
| SOD_RS02165 () | 464617..465081 | - | 465 | WP_004953014.1 | aspartate carbamoyltransferase regulatory subunit | - |
| SOD_RS02170 () | 465094..466029 | - | 936 | WP_004953017.1 | Aspartate carbamoyltransferase | VF |
| SOD_RS02175 () | 466318..467886 | - | 1569 | WP_004953020.1 | ABC transporter substrate-binding protein | - |
| SOD_RS02180 () | 468147..469166 | - | 1020 | WP_004953024.1 | ornithine carbamoyltransferase | - |
| SOD_RS02185 () | 469330..469758 | + | 429 | WP_004953027.1 | ribonuclease E inhibitor RraB | - |
| SOD_RS02190 () | 469802..470566 | + | 765 | WP_004953030.1 | tRNA-(ms[2]io[6]A)-hydroxylase | - |
| SOD_RS02195 () | 470585..472192 | - | 1608 | WP_020453683.1 | GMC family oxidoreductase N-terminal domain-containing protein | - |
| SOD_RS02200 () | 472595..473605 | + | 1011 | WP_004953038.1 | acyltransferase | - |
| SOD_RS02205 () | 473672..474175 | - | 504 | WP_006323361.1 | GNAT family N-acetyltransferase | - |
| SOD_RS02210 () | 474491..477367 | - | 2877 | WP_041416716.1 | valine--tRNA ligase | - |
| SOD_RS02215 () | 477381..477830 | - | 450 | WP_012005017.1 | DNA polymerase III subunit chi | - |
| SOD_RS02220 () | 477915..479426 | - | 1512 | WP_004953046.1 | leucyl aminopeptidase | - |
| SOD_RS02225 () | 479708..480802 | + | 1095 | WP_004953048.1 | LPS export ABC transporter permease LptF | - |
| SOD_RS02230 () | 480802..481872 | + | 1071 | WP_004953051.1 | LPS export ABC transporter permease LptG | - |
| SOD_RS02240 () | 482443..483078 | + | 636 | WP_004953054.1 | carbonic anhydrase | - |
| SOD_RS24850 () | 483505..483962 | - | 458 | Protein_427 | hypothetical protein | - |
| SOD_RS02245 () | 484371..484619 | + | 249 | WP_004953056.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SOD_RS02250 () | 484622..485920 | + | 1299 | WP_004953059.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| SOD_RS02255 () | 486183..487955 | - | 1773 | WP_004953065.1 | TIGR02391 family protein | - |
| SOD_RS02260 () | 487957..489030 | - | 1074 | WP_041416717.1 | DNA cytosine methyltransferase | - |
| SOD_RS02265 () | 489430..490185 | - | 756 | WP_020453685.1 | HNH endonuclease | - |
| SOD_RS02270 () | 490377..490694 | - | 318 | WP_041416718.1 | hypothetical protein | - |
| SOD_RS25960 () | 490749..490829 | - | 81 | Protein_434 | ash family protein | - |
| SOD_RS02275 () | 491048..492478 | - | 1431 | WP_004953075.1 | 6-phospho-beta-glucosidase | - |
| SOD_RS02280 () | 492629..494074 | - | 1446 | WP_004953078.1 | PTS cellobiose/arbutin/salicin transporter subunit IIBC | - |
| SOD_RS02285 () | 494360..495394 | + | 1035 | WP_147150498.1 | LacI family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|