MGE detailed information
MGE type: Genomic_island MGE length: 37713 bp
Accession: NC_021591 Location: 1103407..1141119 Organism: Serratia plymuthica 4Rx13 Replicon: chromosome
Accession: NC_021591 Location: 1103407..1141119 Organism: Serratia plymuthica 4Rx13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SOD_RS24945 () | 1099278..1099478 | + | 201 | WP_004949432.1 | hypothetical protein | - |
| SOD_RS05055 () | 1099433..1099771 | + | 339 | WP_080653234.1 | hypothetical protein | - |
| SOD_RS05065 () | 1100189..1101403 | + | 1215 | WP_004949436.1 | tyrosine-type recombinase/integrase | - |
| SOD_RS05070 () | 1101753..1103402 | + | 1650 | WP_004949438.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| SOD_RS05075 () | 1103407..1104729 | + | 1323 | WP_020453715.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| SOD_RS05080 () | 1104710..1109788 | + | 5079 | WP_004949442.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| SOD_RS05085 () | 1109953..1110306 | + | 354 | WP_155243328.1 | hypothetical protein | - |
| SOD_RS05090 () | 1110303..1111502 | + | 1200 | WP_004949445.1 | DNA phosphorothioation-associated DGQHR protein 1 | - |
| SOD_RS05095 () | 1111600..1111953 | - | 354 | WP_004949447.1 | DNA sulfur modification protein DndE | - |
| SOD_RS05100 () | 1111953..1113953 | - | 2001 | WP_004949448.1 | DNA sulfur modification protein DndD | - |
| SOD_RS05105 () | 1113943..1115577 | - | 1635 | WP_004949450.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| SOD_RS05110 () | 1115574..1116659 | - | 1086 | WP_004949453.1 | DNA sulfur modification protein DndB | - |
| SOD_RS05115 () | 1117118..1117324 | - | 207 | WP_004949457.1 | AlpA family transcriptional regulator | - |
| SOD_RS05120 () | 1117471..1118040 | - | 570 | WP_020453716.1 | inovirus-type Gp2 protein | - |
| SOD_RS05125 () | 1119038..1119922 | + | 885 | WP_020453717.1 | hypothetical protein | - |
| SOD_RS05130 () | 1120754..1121011 | + | 258 | WP_071824755.1 | hypothetical protein | - |
| SOD_RS05140 () | 1121322..1121798 | + | 477 | WP_004949461.1 | hypothetical protein | - |
| SOD_RS05145 () | 1122040..1122489 | + | 450 | WP_004949464.1 | antirestriction protein | - |
| SOD_RS05150 () | 1122526..1123005 | + | 480 | WP_041417310.1 | DNA repair protein RadC | - |
| SOD_RS05155 () | 1123017..1123352 | + | 336 | WP_004949470.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| SOD_RS05160 () | 1123415..1123783 | + | 369 | WP_004949474.1 | TA system toxin CbtA family protein | Toxin Detail |
| SOD_RS05165 () | 1123780..1124109 | + | 330 | WP_020453718.1 | hypothetical protein | - |
| SOD_RS05170 () | 1124560..1125801 | + | 1242 | WP_004949476.1 | IS110 family transposase ISCps4 | Transposase |
| SOD_RS25970 () | 1125844..1126281 | - | 438 | WP_020453720.1 | hypothetical protein | - |
| SOD_RS05185 () | 1126824..1130633 | - | 3810 | WP_020453721.1 | hypothetical protein | - |
| SOD_RS05190 () | 1130887..1131045 | - | 159 | Protein_1012 | IS3 family transposase ISRaq1 | Transposase |
| SOD_RS05195 () | 1131307..1131633 | + | 327 | WP_004949485.1 | DUF4942 domain-containing protein | - |
| SOD_RS24955 () | 1131779..1131985 | - | 207 | Protein_1014 | tyrosine-type recombinase/integrase | - |
| SOD_RS25695 () | 1131998..1132309 | + | 312 | WP_155243329.1 | excisionase Xis | - |
| SOD_RS05200 () | 1132624..1133307 | + | 684 | WP_020453722.1 | hypothetical protein | - |
| SOD_RS25700 () | 1133307..1133687 | + | 381 | WP_020453723.1 | hypothetical protein | - |
| SOD_RS05205 () | 1134207..1134880 | + | 674 | Protein_1018 | hypothetical protein | - |
| SOD_RS05210 () | 1135126..1136019 | - | 894 | WP_004949489.1 | HTH-type transcriptional regulator PgrR | VF |
| SOD_RS05215 () | 1136185..1137399 | + | 1215 | WP_020453725.1 | SMP-30/gluconolactonase/LRE family protein | - |
| SOD_RS05220 () | 1137444..1138436 | - | 993 | WP_020453726.1 | HTH-type transcriptional regulator CdhR | VF |
| SOD_RS05225 () | 1138689..1140587 | + | 1899 | WP_004949500.1 | beta-ketoacyl synthase | - |
| SOD_RS05230 () | 1140709..1141119 | + | 411 | WP_037433883.1 | membrane protein | - |
| SOD_RS05235 () | 1141159..1141986 | + | 828 | WP_004949502.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|