MGE detailed information
MGE type: Prophage MGE length: 58411 bp
Accession: NC_021554 Location: 1532474..1590884 Organism: Staphylococcus aureus CA-347 Replicon: chromosome
Accession: NC_021554 Location: 1532474..1590884 Organism: Staphylococcus aureus CA-347 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA347_RS07315 () | 1527534..1528913 | - | 1380 | WP_000902118.1 | ATP-dependent DNA helicase | - |
| CA347_RS07320 () | 1528903..1529856 | - | 954 | WP_001163808.1 | helix-turn-helix domain-containing protein | - |
| CA347_RS07325 () | 1529964..1530212 | + | 249 | WP_001151999.1 | ferredoxin | - |
| CA347_RS07330 () | 1530318..1530863 | - | 546 | WP_001186906.1 | ECF transporter S component | - |
| CA347_RS07340 () | 1531469..1532383 | - | 915 | WP_000476856.1 | DUF1672 domain-containing protein | - |
| CA347_RS15570 () | 1532474..1532689 | - | 216 | WP_170267452.1 | hypothetical protein | - |
| CA347_RS07350 () | 1533066..1533902 | - | 837 | WP_000675478.1 | hypothetical protein | - |
| CA347_RS07360 () | 1534518..1535972 | - | 1455 | WP_000909210.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CA347_RS07365 () | 1535983..1536285 | - | 303 | WP_000339144.1 | phage holin | - |
| CA347_RS07370 () | 1536421..1536720 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| CA347_RS07375 () | 1536766..1536930 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| CA347_RS07380 () | 1536923..1537312 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| CA347_RS07385 () | 1537312..1538778 | - | 1467 | WP_000067131.1 | BppU family phage baseplate upper protein | - |
| CA347_RS07390 () | 1538778..1540688 | - | 1911 | WP_000429552.1 | hypothetical protein | - |
| CA347_RS07395 () | 1540704..1540994 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| CA347_RS07400 () | 1540994..1542577 | - | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| CA347_RS07405 () | 1542586..1543410 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| CA347_RS07410 () | 1543410..1549610 | - | 6201 | WP_001003425.1 | phage tail tape measure protein | - |
| CA347_RS07415 () | 1549624..1549782 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| CA347_RS07420 () | 1549824..1550174 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| CA347_RS07425 () | 1550232..1550687 | - | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| CA347_RS07430 () | 1550779..1551420 | - | 642 | WP_000807540.1 | tail protein | - |
| CA347_RS07435 () | 1551455..1551850 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| CA347_RS07440 () | 1551851..1552252 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| CA347_RS07445 () | 1552249..1552581 | - | 333 | WP_000395505.1 | hypothetical protein | - |
| CA347_RS07450 () | 1552593..1552871 | - | 279 | WP_000050975.1 | head-tail connector protein | - |
| CA347_RS07455 () | 1552940..1554103 | - | 1164 | WP_001142735.1 | phage major capsid protein | - |
| CA347_RS07460 () | 1554115..1554888 | - | 774 | WP_000061868.1 | Clp protease ClpP | - |
| CA347_RS07465 () | 1554872..1556110 | - | 1239 | WP_001100670.1 | phage portal protein | - |
| CA347_RS07470 () | 1556115..1557806 | - | 1692 | WP_000153555.1 | terminase large subunit | - |
| CA347_RS07475 () | 1557796..1558101 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| CA347_RS07480 () | 1558230..1558544 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| CA347_RS07485 () | 1558701..1559138 | - | 438 | WP_000513699.1 | transcriptional regulator | - |
| CA347_RS07490 () | 1559151..1560518 | - | 1368 | WP_072519166.1 | DEAD/DEAH box helicase | - |
| CA347_RS07495 () | 1560499..1560789 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| CA347_RS07500 () | 1560923..1561027 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| CA347_RS15575 () | 1561130..1563577 | - | 2448 | WP_000884846.1 | virulence-associated E family protein | - |
| CA347_RS07510 () | 1563629..1563829 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| CA347_RS07515 () | 1563897..1564049 | - | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| CA347_RS07520 () | 1564046..1564435 | - | 390 | WP_001568228.1 | hypothetical protein | - |
| CA347_RS07525 () | 1564425..1564661 | - | 237 | WP_000481976.1 | hypothetical protein | - |
| CA347_RS07530 () | 1564686..1564922 | - | 237 | WP_000195833.1 | DUF1381 domain-containing protein | - |
| CA347_RS07535 () | 1564919..1565161 | - | 243 | WP_000028780.1 | hypothetical protein | - |
| CA347_RS07540 () | 1565198..1565734 | - | 537 | WP_000185680.1 | dUTPase | - |
| CA347_RS07545 () | 1565727..1565975 | - | 249 | WP_016528722.1 | DUF1024 family protein | - |
| CA347_RS07550 () | 1565968..1566399 | - | 432 | WP_000615884.1 | hypothetical protein | - |
| CA347_RS07555 () | 1566399..1566590 | - | 192 | WP_000983947.1 | hypothetical protein | - |
| CA347_RS07560 () | 1566587..1566979 | - | 393 | WP_016528723.1 | hypothetical protein | - |
| CA347_RS07565 () | 1566994..1567242 | - | 249 | WP_016528724.1 | hypothetical protein | - |
| CA347_RS07570 () | 1567243..1567602 | - | 360 | WP_000029381.1 | hypothetical protein | - |
| CA347_RS07575 () | 1567603..1567788 | - | 186 | WP_001187249.1 | DUF3113 family protein | - |
| CA347_RS15010 () | 1567788..1567943 | - | 156 | WP_000152769.1 | hypothetical protein | - |
| CA347_RS07580 () | 1567955..1569907 | - | 1953 | WP_076050776.1 | DNA polymerase | - |
| CA347_RS07585 () | 1569975..1570532 | - | 558 | WP_016528725.1 | DUF2815 family protein | - |
| CA347_RS07590 () | 1570558..1571724 | - | 1167 | WP_015581855.1 | DUF2800 domain-containing protein | - |
| CA347_RS07595 () | 1571721..1572083 | - | 363 | WP_000985986.1 | hypothetical protein | - |
| CA347_RS07600 () | 1572098..1572421 | - | 324 | WP_000175000.1 | hypothetical protein | - |
| CA347_RS07605 () | 1572500..1572661 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| CA347_RS07610 () | 1572674..1572937 | - | 264 | WP_001124160.1 | helix-turn-helix domain-containing protein | - |
| CA347_RS07615 () | 1572962..1573177 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| CA347_RS07620 () | 1573232..1573597 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| CA347_RS07625 () | 1573566..1573811 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| CA347_RS07630 () | 1573878..1574258 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| CA347_RS07635 () | 1574245..1574442 | - | 198 | WP_001148860.1 | hypothetical protein | - |
| CA347_RS07640 () | 1574512..1574724 | + | 213 | WP_000362644.1 | hypothetical protein | - |
| CA347_RS15580 () | 1574765..1574914 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| CA347_RS07645 () | 1574929..1575372 | - | 444 | WP_000435357.1 | hypothetical protein | - |
| CA347_RS07650 () | 1575420..1575632 | - | 213 | WP_000213811.1 | helix-turn-helix transcriptional regulator | - |
| CA347_RS07655 () | 1575784..1576515 | + | 732 | WP_000511090.1 | XRE family transcriptional regulator | - |
| CA347_RS07660 () | 1576586..1576768 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| CA347_RS07665 () | 1576805..1576951 | + | 147 | WP_001794606.1 | hypothetical protein | - |
| CA347_RS07670 () | 1576948..1577562 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| CA347_RS07675 () | 1577688..1578893 | + | 1206 | WP_000264751.1 | site-specific integrase | - |
| CA347_RS07680 () | 1578936..1580963 | - | 2028 | WP_001827592.1 | hypothetical protein | - |
| CA347_RS07685 () | 1580956..1581885 | - | 930 | WP_001622322.1 | DUF1672 domain-containing protein | - |
| CA347_RS07690 () | 1582137..1583888 | - | 1752 | WP_000987760.1 | two-component system sensor histidine kinase SrrB | - |
| CA347_RS07695 () | 1583869..1584594 | - | 726 | WP_000064074.1 | two-component system response regulator SrrA | - |
| CA347_RS07700 () | 1584727..1585464 | - | 738 | WP_001622315.1 | rRNA pseudouridine synthase | - |
| CA347_RS07705 () | 1585457..1585999 | - | 543 | WP_000368647.1 | SMC-Scp complex subunit ScpB | - |
| CA347_RS07710 () | 1585992..1586723 | - | 732 | WP_000273372.1 | segregation/condensation protein A | - |
| CA347_RS07715 () | 1586815..1587321 | + | 507 | WP_001183432.1 | DUF309 domain-containing protein | - |
| CA347_RS07720 () | 1587399..1588286 | - | 888 | WP_000447733.1 | site-specific tyrosine recombinase XerD | - |
| CA347_RS07725 () | 1588334..1588783 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| CA347_RS07730 () | 1588888..1589430 | - | 543 | WP_000365244.1 | NUDIX hydrolase | - |
| CA347_RS07735 () | 1589512..1590420 | + | 909 | WP_001171342.1 | aldo/keto reductase | - |
| CA347_RS07740 () | 1590636..1590884 | - | 249 | WP_000995799.1 | hypothetical protein | - |
| CA347_RS07745 () | 1590900..1591655 | - | 756 | WP_000678241.1 | SDR family oxidoreductase | - |
| CA347_RS07750 () | 1591797..1592612 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| CA347_RS07755 () | 1592717..1593637 | - | 921 | WP_000454059.1 | ribonuclease Z | - |
| CA347_RS07760 () | 1593950..1595434 | + | 1485 | WP_000105075.1 | glucose-6-phosphate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|