MGE detailed information
MGE type: IScluster/Tn MGE length: 16172 bp
Accession: NC_021506 Location: 40266..56437 Organism: Pseudomonas resinovorans NBRC 106553 Replicon: plasmid pCAR1.3
Accession: NC_021506 Location: 40266..56437 Organism: Pseudomonas resinovorans NBRC 106553 Replicon: plasmid pCAR1.3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCA10_RS28355 (PCA10_p0380) | 35797..36744 | + | 948 | WP_011077888.1 | acetaldehyde dehydrogenase (acetylating) | - |
| PCA10_RS29940 (PCA10_p0390) | 36753..37763 | + | 1011 | WP_019367563.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| PCA10_RS29950 (PCA10_p0410) | 38064..38453 | - | 390 | WP_016502314.1 | hypothetical protein | - |
| PCA10_RS28360 (PCA10_p0420) | 38434..39231 | - | 798 | WP_011077890.1 | hypothetical protein | - |
| PCA10_RS28365 (PCA10_p0430) | 39240..39650 | - | 411 | WP_016502315.1 | helix-turn-helix domain-containing protein | - |
| PCA10_RS29955 (PCA10_p0440) | 39766..39972 | + | 207 | WP_016502316.1 | DNA-binding protein | - |
| PCA10_RS28370 (PCA10_p0450) | 40266..41246 | + | 981 | WP_011077862.1 | IS5 family transposase ISPre1 | Transposase |
| PCA10_RS28375 (PCA10_p0460) | 41369..42394 | + | 1026 | WP_144277083.1 | putative signaling protein | VF |
| PCA10_RS29960 (PCA10_p0470) | 42645..42914 | + | 270 | WP_011077892.1 | hypothetical protein | - |
| PCA10_RS28380 (PCA10_p0480) | 43058..43333 | - | 276 | WP_016502317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PCA10_RS28385 (PCA10_p0490) | 43333..43605 | - | 273 | WP_016502318.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PCA10_RS28390 (PCA10_p0500) | 43619..44032 | - | 414 | WP_016502319.1 | hypothetical protein | - |
| PCA10_RS28395 (PCA10_p0510) | 44039..44779 | - | 741 | WP_011077894.1 | DUF2807 domain-containing protein | - |
| PCA10_RS28400 (PCA10_p0520) | 45011..45571 | + | 561 | WP_011077895.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| PCA10_RS28405 (PCA10_p0530) | 45575..46846 | + | 1272 | Protein_52 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| PCA10_RS28410 (PCA10_p0540) | 46933..47682 | - | 750 | WP_013100941.1 | IS21 family transposase IS1474 | Transposase |
| PCA10_RS28415 (PCA10_p0550) | 47570..49249 | - | 1680 | WP_011077898.1 | IS21 family transposase IS1162 | Transposase |
| PCA10_RS28420 (PCA10_p0560) | 49456..50703 | - | 1248 | WP_011077899.1 | three-Cys-motif partner protein TcmP | - |
| PCA10_RS28425 (PCA10_p0570) | 50723..51466 | - | 744 | WP_011077900.1 | phage Gp37/Gp68 family protein | - |
| PCA10_RS28430 (PCA10_p0580) | 51496..52467 | - | 972 | WP_011077901.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| PCA10_RS28435 (PCA10_p0590) | 52648..53649 | + | 1002 | WP_011077902.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| PCA10_RS28440 (PCA10_p0600) | 53687..54073 | - | 387 | WP_016502320.1 | MbcA/ParS/Xre antitoxin family protein | - |
| PCA10_RS28445 (PCA10_p0610) | 54163..54552 | + | 390 | WP_011077903.1 | IS66 family transposase ISPre3 | Transposase |
| PCA10_RS28450 (PCA10_p0620) | 54549..54893 | + | 345 | WP_011077904.1 | IS66 family transposase ISPre3 | Transposase |
| PCA10_RS28455 (PCA10_p0630) | 54929..56437 | + | 1509 | WP_011077905.1 | IS66 family transposase ISPre3 | Transposase |
| PCA10_RS28460 (PCA10_p0640) | 56441..57034 | + | 594 | WP_011077906.1 | plasmid pRiA4b ORF-3 family protein | - |
| PCA10_RS28465 (PCA10_p0650) | 57679..57963 | - | 285 | Protein_64 | hypothetical protein | - |
| PCA10_RS29320 (PCA10_p0660) | 58422..58781 | + | 360 | WP_016502323.1 | hypothetical protein | - |
| PCA10_RS28475 (PCA10_p0670) | 58987..59760 | + | 774 | WP_011600753.1 | tellurite resistance protein | - |
| PCA10_RS28480 (PCA10_p0680) | 59771..60889 | + | 1119 | WP_011600754.1 | toxic anion resistance protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|