MGE detailed information
MGE type: Conjugative plasmid MGE length: 110781 bp
Accession: NC_021501 Location: 1..110781 Organism: Klebsiella oxytoca E718 Replicon: plasmid pKOX_NDM1
Accession: NC_021501 Location: 1..110781 Organism: Klebsiella oxytoca E718 Replicon: plasmid pKOX_NDM1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A225_RS30285 () | 32..454 | + | 423 | WP_015493080.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A225_RS30290 () | 454..1725 | + | 1272 | WP_015493081.1 | Y-family DNA polymerase | - |
| A225_RS30295 () | 1861..2832 | - | 972 | WP_016479949.1 | ParB/RepB/Spo0J family partition protein | - |
| A225_RS30300 () | 2829..4034 | - | 1206 | WP_015493083.1 | Plasmid partition protein A | VF |
| A225_RS30305 () | 4397..5029 | + | 633 | WP_016479950.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| A225_RS30310 () | 5090..6058 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| A225_RS34225 () | 6166..6750 | + | 585 | WP_157872492.1 | hypothetical protein | - |
| A225_RS34230 () | 6885..7529 | + | 645 | WP_157872493.1 | hypothetical protein | - |
| A225_RS30315 () | 7742..8773 | - | 1032 | WP_001752311.1 | IS630 family transposase ISEc33 | Transposase |
| A225_RS34235 () | 8795..9271 | + | 477 | WP_157872494.1 | hypothetical protein | - |
| A225_RS30320 () | 10333..11030 | + | 698 | Protein_10 | IS1 family transposase IS1G | Transposase |
| A225_RS30325 () | 11285..13288 | + | 2004 | WP_016479952.1 | hypothetical protein | VF |
| A225_RS30330 () | 13378..14622 | + | 1245 | WP_016479953.1 | hypothetical protein | VF |
| A225_RS32780 () | 14917..15120 | - | 204 | Protein_13 | MerR family transcriptional regulator | - |
| A225_RS30335 () | 15136..15833 | - | 698 | Protein_14 | IS1 family transposase IS1R | Transposase |
| A225_RS30340 () | 16641..17345 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| A225_RS30345 () | 17379..19961 | - | 2583 | WP_016479955.1 | putative signaling protein | VF |
| A225_RS32800 () | 20174..20871 | + | 698 | Protein_17 | IS1 family transposase | - |
| A225_RS30355 () | 21733..21951 | + | 219 | WP_032934863.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A225_RS30360 () | 21953..22258 | + | 306 | WP_008322213.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A225_RS30365 () | 22260..22574 | + | 315 | WP_008322211.1 | hypothetical protein | - |
| A225_RS30370 () | 22564..23355 | + | 792 | WP_008322208.1 | site-specific integrase | - |
| A225_RS30375 () | 23554..24876 | - | 1323 | WP_016479957.1 | GntP family transporter | - |
| A225_RS30380 () | 25038..25784 | - | 747 | Protein_23 | IS5 family transposase IS5D | Transposase |
| A225_RS33295 () | 27005..27157 | - | 153 | Protein_25 | IS5 family transposase IS5D | Transposase |
| A225_RS30400 () | 27639..28378 | + | 740 | Protein_26 | site-specific integrase | - |
| A225_RS30405 () | 28674..29663 | - | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| A225_RS30410 () | 30519..30788 | + | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| A225_RS30415 () | 30792..31322 | + | 531 | WP_016479963.1 | GNAT family N-acetyltransferase | Toxin Detail |
| A225_RS30420 () | 31454..32470 | + | 1017 | WP_087728544.1 | IS5 family transposase IS5D | Transposase |
| A225_RS32810 () | 32617..33366 | - | 750 | Protein_31 | IS3 family transposase ISEhe3 | Transposase |
| A225_RS34025 () | 33376..33495 | - | 120 | Protein_32 | IS30 family transposase | - |
| A225_RS34595 () | 33756..33932 | - | 177 | Protein_33 | IS91 family transposase | - |
| A225_RS30440 () | 34121..35761 | - | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| A225_RS30445 () | 35817..36107 | - | 291 | WP_004201172.1 | co-chaperone GroES | - |
| A225_RS30450 () | 36301..36630 | + | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| A225_RS30455 () | 36635..37666 | + | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| A225_RS30460 () | 37677..38315 | - | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| A225_RS30465 () | 38320..38685 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| A225_RS30470 () | 38689..39501 | - | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| A225_RS30475 () | 40059..40904 | - | 846 | WP_000855769.1 | RmtC family 16S rRNA (guanine(1405)-N(7))-methyltransferase | - |
| A225_RS30480 () | 41201..42730 | - | 1530 | WP_003149906.1 | IS91 family transposase ISVsa3 | Transposase |
| A225_RS30490 () | 43473..44234 | + | 762 | WP_032072922.1 | DDE-type integrase/transposase/recombinase | - |
| A225_RS30495 () | 44268..44954 | + | 687 | WP_016479967.1 | Mu transposase C-terminal domain-containing protein | - |
| A225_RS30500 () | 44951..45883 | + | 933 | WP_015460531.1 | TniB family NTP-binding protein | - |
| A225_RS30505 () | 45885..46850 | + | 966 | WP_015460530.1 | TniQ family protein | - |
| A225_RS32825 () | 47167..47235 | + | 69 | Protein_47 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| A225_RS30510 () | 47229..48068 | + | 840 | WP_032072921.1 | Dihydropteroate synthase | ARG |
| A225_RS30515 () | 48196..48438 | + | 243 | WP_000376617.1 | hypothetical protein | - |
| A225_RS30520 () | 48522..48821 | - | 300 | WP_001183923.1 | DUF2293 domain-containing protein | - |
| A225_RS30530 () | 49438..49989 | + | 552 | Protein_51 | DNA cytosine methyltransferase | - |
| A225_RS30535 () | 50371..51030 | + | 660 | WP_032072920.1 | endonuclease III | - |
| A225_RS30540 () | 51239..52114 | - | 876 | Protein_53 | IS5 family transposase ISKpn26 | Transposase |
| A225_RS30545 () | 52183..53175 | - | 993 | WP_001145102.1 | hypothetical protein | - |
| A225_RS34555 () | 53224..53379 | - | 156 | WP_000074143.1 | hypothetical protein | - |
| A225_RS30550 () | 53583..54563 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| A225_RS30555 () | 54710..55087 | + | 378 | Protein_57 | restriction endonuclease | - |
| A225_RS30560 () | 55214..55771 | + | 558 | WP_042934582.1 | hypothetical protein | - |
| A225_RS30565 () | 56215..56796 | - | 582 | WP_045265539.1 | DUF2913 family protein | - |
| A225_RS30570 () | 56823..57413 | - | 591 | WP_064762226.1 | hypothetical protein | - |
| A225_RS30575 () | 57428..57721 | - | 294 | WP_032072918.1 | hypothetical protein | - |
| A225_RS30580 () | 57810..58094 | - | 285 | WP_032072917.1 | hypothetical protein | - |
| A225_RS30585 () | 58154..59002 | - | 849 | WP_032072916.1 | hypothetical protein | - |
| A225_RS30590 () | 60146..61009 | - | 864 | WP_016247520.1 | incFII family plasmid replication initiator RepA | - |
| A225_RS32860 () | 61002..61079 | - | 78 | WP_011201829.1 | RepA leader peptide Tap | - |
| A225_RS30595 () | 61298..61576 | - | 279 | WP_008324932.1 | replication regulatory protein RepA | - |
| A225_RS30600 () | 61728..62273 | - | 546 | WP_008324931.1 | Phospholipase D | VF |
| A225_RS30605 () | 62421..63212 | - | 792 | WP_016479977.1 | DsbA family protein | - |
| A225_RS30610 () | 63205..63924 | - | 720 | WP_008324922.1 | fertility inhibition protein FinO | - |
| A225_RS30615 () | 63991..64728 | - | 738 | WP_008324912.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| A225_RS30620 () | 64730..69970 | - | 5241 | WP_016479978.1 | Multifunctional conjugation protein TraI | Relaxase |
| A225_RS30625 () | 69970..72216 | - | 2247 | WP_016479979.1 | type IV conjugative transfer system coupling protein TraD | - |
| A225_RS30630 () | 72350..73025 | - | 676 | Protein_73 | Sel1-repeat-containing protein YbeT | VF |
| A225_RS32870 () | 73100..73530 | - | 431 | Protein_74 | entry exclusion protein | - |
| A225_RS30640 () | 73552..76374 | - | 2823 | WP_008324119.1 | conjugal transfer mating pair stabilization protein TraG | - |
| A225_RS30645 () | 76374..77744 | - | 1371 | WP_016247527.1 | conjugal transfer protein TraH | - |
| A225_RS30650 () | 77731..78159 | - | 429 | WP_008324122.1 | hypothetical protein | - |
| A225_RS30655 () | 78152..78706 | - | 555 | WP_008324125.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A225_RS30660 () | 78696..78944 | - | 249 | WP_016479982.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A225_RS30665 () | 78961..79710 | - | 750 | WP_008324127.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| A225_RS30670 () | 79741..79929 | - | 189 | WP_008324128.1 | hypothetical protein | - |
| A225_RS30675 () | 79961..81814 | - | 1854 | WP_016479983.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| A225_RS30680 () | 81811..82440 | - | 630 | WP_008324130.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A225_RS30685 () | 82457..83443 | - | 987 | WP_042934586.1 | conjugal transfer pilus assembly protein TraU | - |
| A225_RS30690 () | 83446..84093 | - | 648 | WP_008324132.1 | type-F conjugative transfer system protein TraW | - |
| A225_RS30695 () | 84093..84440 | - | 348 | WP_008324133.1 | type-F conjugative transfer system protein TrbI | - |
| A225_RS30700 () | 84437..87067 | - | 2631 | WP_008324134.1 | type IV secretion system protein TraC | - |
| A225_RS30705 () | 87060..87626 | - | 567 | WP_008324135.1 | conjugal transfer protein TraP | - |
| A225_RS30710 () | 87616..88017 | - | 402 | WP_016479985.1 | hypothetical protein | - |
| A225_RS32875 () | 88001..88186 | - | 186 | WP_008324139.1 | hypothetical protein | - |
| A225_RS30715 () | 88190..88414 | - | 225 | WP_008324141.1 | TraR/DksA C4-type zinc finger protein | - |
| A225_RS30720 () | 88534..89073 | - | 540 | WP_016247533.1 | type IV conjugative transfer system lipoprotein TraV | - |
| A225_RS30725 () | 89095..90489 | - | 1395 | WP_016479986.1 | conjugal transfer protein TraB | - |
| A225_RS30730 () | 90476..91219 | - | 744 | WP_008324157.1 | type-F conjugative transfer system secretin TraK | - |
| A225_RS30735 () | 91206..91772 | - | 567 | WP_016247535.1 | type IV conjugative transfer system protein TraE | - |
| A225_RS30740 () | 91787..92092 | - | 306 | WP_016479987.1 | type IV conjugative transfer system protein TraL | - |
| A225_RS30745 () | 92243..92593 | - | 351 | WP_016247536.1 | type IV conjugative transfer system pilin TraA | - |
| A225_RS30750 () | 92651..92875 | - | 225 | WP_008324165.1 | TraY domain-containing protein | - |
| A225_RS30755 () | 92962..93651 | - | 690 | WP_008324166.1 | hypothetical protein | - |
| A225_RS30760 () | 93840..94232 | - | 393 | WP_008324167.1 | relaxosome protein TraM | - |
| A225_RS30765 () | 94664..95140 | + | 477 | WP_008324168.1 | hypothetical protein | VF |
| A225_RS30770 () | 95187..95717 | - | 531 | WP_008324170.1 | antirestriction protein | - |
| A225_RS30775 () | 96344..97174 | - | 831 | WP_008324171.1 | type I restriction-modification system subunit M | - |
| A225_RS30785 () | 97565..97909 | - | 345 | WP_008324177.1 | hypothetical protein | - |
| A225_RS30790 () | 97956..98243 | - | 288 | WP_008324178.1 | hypothetical protein | - |
| A225_RS30795 () | 98297..98671 | - | 375 | WP_008324180.1 | hypothetical protein | - |
| A225_RS30800 () | 99298..99657 | - | 360 | WP_015493069.1 | hypothetical protein | - |
| A225_RS34560 () | 99719..100042 | - | 324 | WP_008324183.1 | hypothetical protein | - |
| A225_RS30810 () | 100039..100767 | - | 729 | WP_008324185.1 | plasmid SOS inhibition protein A | - |
| A225_RS30815 () | 100764..101195 | - | 432 | WP_008324186.1 | conjugation system SOS inhibitor PsiB | - |
| A225_RS30820 () | 101238..103247 | - | 2010 | WP_016479992.1 | ParB/RepB/Spo0J family partition protein | - |
| A225_RS30825 () | 103318..103548 | - | 231 | WP_015493071.1 | DUF905 domain-containing protein | - |
| A225_RS30835 () | 104174..104491 | - | 318 | Protein_113 | hypothetical protein | - |
| A225_RS30840 () | 104526..104780 | - | 255 | WP_015493072.1 | DNA polymerase III subunit theta | - |
| A225_RS30845 () | 104973..105164 | - | 192 | WP_015493073.1 | hypothetical protein | - |
| A225_RS30850 () | 105207..105713 | - | 507 | WP_015493074.1 | antirestriction protein ArdA | - |
| A225_RS30855 () | 106118..106897 | - | 780 | WP_015493075.1 | hypothetical protein | - |
| A225_RS30860 () | 106951..107370 | - | 420 | WP_016479994.1 | DUF1380 domain-containing protein | - |
| A225_RS30865 () | 107381..107602 | - | 222 | WP_015493077.1 | hypothetical protein | - |
| A225_RS30870 () | 107602..108279 | - | 678 | WP_002211749.1 | DNA methylase | - |
| A225_RS30875 () | 108638..109309 | + | 672 | WP_015493079.1 | SOS response-associated peptidase family protein | - |
| A225_RS30880 () | 109533..110753 | + | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|