MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 56977 bp
Accession: NC_021361 Location: 1..56977 Organism: Pseudomonas fluorescens A506 Replicon: plasmid pA506
Accession: NC_021361 Location: 1..56977 Organism: Pseudomonas fluorescens A506 Replicon: plasmid pA506
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PFLA506_RS26905 () | 944..1729 | + | 786 | WP_016359343.1 | hypothetical protein | - |
| PFLA506_RS26910 () | 2435..2863 | + | 429 | WP_016359355.1 | S24 family peptidase | - |
| PFLA506_RS26915 () | 2853..4151 | + | 1299 | WP_016359344.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PFLA506_RS26920 () | 4362..4631 | + | 270 | WP_044483783.1 | hypothetical protein | - |
| PFLA506_RS26925 () | 4843..5514 | + | 672 | WP_016359335.1 | site-specific integrase | - |
| PFLA506_RS26930 () | 5593..5841 | + | 249 | WP_016359329.1 | hypothetical protein | VF |
| PFLA506_RS26935 () | 5918..6097 | + | 180 | WP_016359328.1 | hypothetical protein | - |
| PFLA506_RS26940 () | 6125..6307 | + | 183 | WP_016359306.1 | hypothetical protein | - |
| PFLA506_RS26945 () | 6409..6660 | + | 252 | WP_016359333.1 | hypothetical protein | - |
| PFLA506_RS26950 () | 6764..7192 | + | 429 | WP_016359348.1 | hypothetical protein | - |
| PFLA506_RS26955 () | 7298..7528 | + | 231 | WP_016359311.1 | hypothetical protein | - |
| PFLA506_RS26960 () | 7606..8055 | + | 450 | WP_016359347.1 | hypothetical protein | - |
| PFLA506_RS26970 () | 8436..8801 | + | 366 | WP_016359352.1 | hypothetical protein | - |
| PFLA506_RS26975 () | 8815..9036 | + | 222 | WP_016359345.1 | hypothetical protein | - |
| PFLA506_RS26980 () | 9331..9678 | + | 348 | WP_044483785.1 | hypothetical protein | - |
| PFLA506_RS28760 () | 9663..9833 | + | 171 | WP_158470861.1 | hypothetical protein | - |
| PFLA506_RS28120 () | 10115..10498 | + | 384 | WP_016359371.1 | hypothetical protein | - |
| PFLA506_RS26985 () | 10605..11582 | - | 978 | WP_016359372.1 | IS91 family transposase ISWz1 | Transposase |
| PFLA506_RS26990 () | 11579..12130 | - | 552 | WP_016359365.1 | GNAT family N-acetyltransferase | - |
| PFLA506_RS26995 () | 12261..12602 | - | 342 | WP_016359361.1 | hypothetical protein | - |
| PFLA506_RS27000 () | 12599..13306 | - | 708 | WP_016359334.1 | ParA family protein | - |
| PFLA506_RS27005 () | 14314..14733 | + | 420 | WP_016359360.1 | hypothetical protein | - |
| PFLA506_RS27015 () | 15010..15327 | + | 318 | WP_016359358.1 | hypothetical protein | - |
| PFLA506_RS27020 () | 15472..17019 | + | 1548 | WP_144269802.1 | KlcB family protein | - |
| PFLA506_RS27025 () | 17098..17280 | + | 183 | WP_016359316.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PFLA506_RS27030 () | 17311..17733 | + | 423 | WP_016359324.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PFLA506_RS27035 () | 17776..18009 | + | 234 | WP_016359340.1 | hypothetical protein | - |
| PFLA506_RS27040 () | 18049..18354 | + | 306 | WP_016359337.1 | hypothetical protein | - |
| PFLA506_RS27045 () | 18351..18629 | + | 279 | WP_016359331.1 | hypothetical protein | - |
| PFLA506_RS27050 () | 18645..18875 | + | 231 | WP_016359322.1 | hypothetical protein | - |
| PFLA506_RS27055 () | 19010..19483 | - | 474 | WP_044483786.1 | hypothetical protein | - |
| PFLA506_RS27060 () | 19614..19952 | - | 339 | WP_016359307.1 | helix-turn-helix transcriptional regulator | - |
| PFLA506_RS27065 () | 20215..20730 | + | 516 | WP_016359370.1 | transcription termination factor, NusG family | - |
| PFLA506_RS27070 () | 20816..21028 | + | 213 | WP_044483787.1 | hypothetical protein | - |
| PFLA506_RS27075 () | 21530..21853 | + | 324 | WP_016359336.1 | hypothetical protein | - |
| PFLA506_RS28130 () | 21883..22305 | + | 423 | WP_016359339.1 | VirB3 family type IV secretion system protein | - |
| PFLA506_RS27080 () | 22208..24625 | + | 2418 | WP_016359314.1 | VirB4 family type IV secretion system protein | - |
| PFLA506_RS27085 () | 24633..25346 | + | 714 | WP_016359313.1 | P-type DNA transfer protein VirB5 | - |
| PFLA506_RS27090 () | 25412..25738 | + | 327 | WP_016359362.1 | hypothetical protein | - |
| PFLA506_RS27095 () | 25749..26696 | + | 948 | WP_016359325.1 | type IV secretion system protein | - |
| PFLA506_RS28135 () | 26754..27512 | + | 759 | WP_016359317.1 | hypothetical protein | VF |
| PFLA506_RS27105 () | 27509..29197 | + | 1689 | WP_052329191.1 | Outer membrane lipoprotein BfpB | VF |
| PFLA506_RS27110 () | 29270..30517 | + | 1248 | WP_144269806.1 | type 4b pilus protein PilO2 | - |
| PFLA506_RS27115 () | 30540..31028 | + | 489 | WP_144269805.1 | type IV pilus biogenesis protein PilP | - |
| PFLA506_RS27120 () | 31042..32568 | + | 1527 | WP_016359308.1 | Type II secretion system protein E | VF |
| PFLA506_RS27125 () | 32586..33677 | + | 1092 | WP_044483793.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PFLA506_RS28140 () | 33689..34273 | + | 585 | WP_016359368.1 | type IV pilus major subunit PilS2 | - |
| PFLA506_RS27130 () | 34273..35253 | + | 981 | WP_016359354.1 | putative protein YggR | VF |
| PFLA506_RS27135 () | 35280..36530 | + | 1251 | WP_044483794.1 | hypothetical protein | VF |
| PFLA506_RS27140 () | 36621..37058 | + | 438 | WP_048889401.1 | hypothetical protein | VF |
| PFLA506_RS27145 () | 37115..37582 | + | 468 | WP_144269807.1 | hypothetical protein | VF |
| PFLA506_RS27150 () | 37692..38483 | + | 792 | WP_016359318.1 | type IV secretion system protein | - |
| PFLA506_RS28145 () | 38476..39258 | + | 783 | WP_144269803.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| PFLA506_RS27155 () | 39245..40549 | + | 1305 | WP_044483788.1 | Type IV secretion system protein virB10 | VF |
| PFLA506_RS27160 () | 40615..41634 | + | 1020 | WP_044483796.1 | Type IV secretion system protein VirB11 | VF |
| PFLA506_RS27165 () | 41643..41993 | + | 351 | WP_016359327.1 | hypothetical protein | - |
| PFLA506_RS27170 () | 42135..44558 | + | 2424 | WP_016359323.1 | ATP-binding protein | - |
| PFLA506_RS27175 () | 44743..45027 | + | 285 | WP_044483789.1 | hypothetical protein | - |
| PFLA506_RS27180 () | 45008..46549 | + | 1542 | WP_016359341.1 | type IV secretory system conjugative DNA transfer family protein | - |
| PFLA506_RS27185 () | 46699..46959 | + | 261 | WP_016359330.1 | KikA family protein | - |
| PFLA506_RS27190 () | 47007..49163 | + | 2157 | WP_016359326.1 | type IA DNA topoisomerase | - |
| PFLA506_RS27195 () | 49197..49673 | + | 477 | WP_016359369.1 | single-stranded DNA-binding protein | - |
| PFLA506_RS27200 () | 49971..50768 | + | 798 | WP_016359310.1 | conjugal transfer protein, TraL family | - |
| PFLA506_RS27205 () | 50772..51407 | + | 636 | WP_016359320.1 | hypothetical protein | - |
| PFLA506_RS27210 () | 51446..51844 | - | 399 | WP_044483790.1 | hypothetical protein | - |
| PFLA506_RS27215 () | 52122..52466 | + | 345 | WP_016359346.1 | hypothetical protein | Relaxase |
| PFLA506_RS28765 () | 52456..56661 | + | 4206 | WP_016359349.1 | relaxase, NikB family | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|