MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NC_021251 Location: 3794879..3799821 Organism: Mycobacterium tuberculosis CCDC5079 Replicon: chromosome
Accession: NC_021251 Location: 3794879..3799821 Organism: Mycobacterium tuberculosis CCDC5079 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFBS_RS17885 () | 3790714..3791604 | - | 891 | WP_016330438.1 | diterpene synthase | - |
| CFBS_RS17890 () | 3791613..3793451 | - | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| CFBS_RS17895 () | 3793448..3794437 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CFBS_RS17900 () | 3794437..3794826 | - | 390 | Protein_3487 | polyprenyl synthetase family protein | - |
| CFBS_RS17910 () | 3794879..3796140 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CFBS_RS17915 () | 3796182..3796847 | - | 666 | Protein_3489 | polyprenyl synthetase family protein | - |
| CFBS_RS17920 () | 3797601..3797993 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CFBS_RS17925 () | 3797993..3798268 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CFBS_RS21900 () | 3798480..3799821 | + | 1342 | Protein_3492 | ISNCY family transposase ISRjo3 | Transposase |
| CFBS_RS17940 () | 3800011..3802188 | + | 2178 | WP_016330440.1 | PE family protein | - |
| CFBS_RS17945 () | 3802259..3803131 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| CFBS_RS17950 () | 3803205..3803915 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |