MGE detailed information
MGE type: Genomic_island MGE length: 16947 bp
Accession: NC_021235 Location: 1613646..1630592 Organism: Lactobacillus fermentum F-6 Replicon: chromosome
Accession: NC_021235 Location: 1613646..1630592 Organism: Lactobacillus fermentum F-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LBFF_RS08000 () | 1609420..1610817 | + | 1398 | WP_003684076.1 | sodium:proton antiporter | - |
| LBFF_RS10800 () | 1611332..1611529 | - | 198 | WP_135293176.1 | effector binding domain-containing protein | - |
| LBFF_RS08015 () | 1611726..1612766 | - | 1041 | WP_015639354.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LBFF_RS08020 () | 1613646..1614896 | - | 1251 | WP_041813976.1 | IS200-IS605 family transposase ISLjo5 | Transposase |
| LBFF_RS08025 () | 1614970..1615425 | + | 456 | WP_015639357.1 | IS200-IS605 family transposase ISLjo5 | Transposase |
| LBFF_RS08030 () | 1615632..1616318 | + | 687 | WP_015639358.1 | hypothetical protein | - |
| LBFF_RS08035 () | 1616840..1617961 | + | 1122 | WP_015639359.1 | PTS sugar transporter subunit IIC | - |
| LBFF_RS08040 () | 1618370..1618633 | - | 264 | WP_015639360.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LBFF_RS08045 () | 1618630..1618884 | - | 255 | WP_015639361.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LBFF_RS08050 () | 1619217..1620437 | - | 1221 | WP_015639362.1 | IS256 family transposase ISCARN68 | Transposase |
| LBFF_RS08055 () | 1620571..1621461 | + | 891 | Protein_1567 | IS30 family transposase ISCth3 | Transposase |
| LBFF_RS08060 () | 1621893..1623263 | - | 1371 | WP_015639364.1 | FAD-dependent oxidoreductase | - |
| LBFF_RS08065 () | 1623378..1624283 | - | 906 | WP_155819474.1 | IS3 family transposase ISEnfa5 | Transposase |
| LBFF_RS08070 () | 1624220..1624834 | - | 615 | WP_015639366.1 | helix-turn-helix domain-containing protein | - |
| LBFF_RS08075 () | 1625019..1625669 | - | 651 | WP_015639367.1 | Crp/Fnr family transcriptional regulator | - |
| LBFF_RS08080 () | 1625694..1625975 | - | 282 | WP_003681670.1 | hypothetical protein | - |
| LBFF_RS08085 () | 1626027..1626254 | - | 228 | WP_003681668.1 | heavy-metal-associated domain-containing protein | - |
| LBFF_RS08090 () | 1626277..1628205 | - | 1929 | WP_015639369.1 | heavy metal translocating P-type ATPase | - |
| LBFF_RS08095 () | 1628354..1628626 | - | 273 | Protein_1575 | hypothetical protein | - |
| LBFF_RS08100 () | 1628861..1630000 | + | 1140 | WP_015639372.1 | IS30 family transposase ISCth3 | Transposase |
| LBFF_RS08105 () | 1630089..1630592 | - | 504 | WP_015639373.1 | helix-turn-helix transcriptional regulator | - |
| LBFF_RS08110 () | 1631074..1632450 | - | 1377 | WP_015639374.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| LBFF_RS08115 () | 1632559..1633572 | - | 1014 | WP_015639375.1 | diacylglycerol kinase | - |
| LBFF_RS08120 () | 1633585..1635009 | - | 1425 | WP_012391578.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|