MGE detailed information
MGE type: Prophage MGE length: 77441 bp
Accession: NC_021184 Location: 4461468..4538908 Organism: Desulfotomaculum gibsoniae DSM 7213 Replicon: chromosome
Accession: NC_021184 Location: 4461468..4538908 Organism: Desulfotomaculum gibsoniae DSM 7213 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DESGI_RS20730 () | 4456904..4457227 | + | 324 | WP_006521338.1 | copper amine oxidase N-terminal domain-containing protein | - |
| DESGI_RS20735 () | 4457384..4459795 | - | 2412 | WP_006521337.1 | S-layer homology domain-containing protein | - |
| DESGI_RS20740 () | 4460198..4460752 | + | 555 | WP_006521336.1 | copper amine oxidase N-terminal domain-containing protein | - |
| DESGI_RS20745 () | 4461468..4462346 | - | 879 | WP_006521334.1 | IS91 family transposase ISMno23 | Transposase |
| DESGI_RS20750 () | 4462409..4463341 | + | 933 | WP_006521333.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| DESGI_RS24125 () | 4463600..4463749 | - | 150 | WP_083939990.1 | DUF2283 domain-containing protein | - |
| DESGI_RS20755 () | 4463860..4464045 | - | 186 | WP_006521332.1 | hypothetical protein | - |
| DESGI_RS24130 () | 4464338..4464634 | + | 297 | WP_083939991.1 | hypothetical protein | - |
| DESGI_RS20760 () | 4464705..4465562 | + | 858 | WP_006521331.1 | IS91 family transposase ISAzo26 | Transposase |
| DESGI_RS20765 () | 4465629..4466336 | + | 708 | WP_207638412.1 | hypothetical protein | - |
| DESGI_RS20770 () | 4466413..4467399 | + | 987 | WP_006521329.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DESGI_RS20775 () | 4467522..4470317 | + | 2796 | WP_006521328.1 | hypothetical protein | - |
| DESGI_RS20780 () | 4471023..4471223 | - | 201 | WP_041285023.1 | helix-turn-helix domain-containing protein | - |
| DESGI_RS20785 () | 4471243..4473015 | - | 1773 | WP_041285024.1 | AAA family ATPase | - |
| DESGI_RS20790 () | 4473008..4473463 | - | 456 | WP_006521325.1 | hypothetical protein | - |
| DESGI_RS20795 () | 4473456..4474466 | - | 1011 | WP_006521324.1 | hypothetical protein | - |
| DESGI_RS25125 () | 4474820..4475086 | + | 267 | WP_006521323.1 | hypothetical protein | - |
| DESGI_RS20810 () | 4475312..4475857 | + | 546 | WP_006521322.1 | sigma-70 family RNA polymerase sigma factor | - |
| DESGI_RS20815 () | 4475973..4476248 | + | 276 | WP_006521321.1 | hypothetical protein | - |
| DESGI_RS20820 () | 4476335..4477498 | + | 1164 | WP_157872837.1 | DEAD/DEAH box helicase | - |
| DESGI_RS20825 () | 4477504..4477872 | + | 369 | WP_015618021.1 | VRR-NUC domain-containing protein | - |
| DESGI_RS20830 () | 4477794..4479494 | + | 1701 | WP_006521319.1 | AAA family ATPase | - |
| DESGI_RS20835 () | 4479516..4479968 | + | 453 | WP_006521318.1 | DUF669 domain-containing protein | - |
| DESGI_RS20840 () | 4479973..4481664 | + | 1692 | WP_041285769.1 | DNA polymerase | - |
| DESGI_RS24135 () | 4481661..4482314 | + | 654 | WP_006521316.1 | Bro-N domain-containing protein | - |
| DESGI_RS20850 () | 4482602..4484512 | + | 1911 | WP_006521315.1 | primase | - |
| DESGI_RS20855 () | 4484713..4485057 | + | 345 | WP_006521314.1 | hypothetical protein | - |
| DESGI_RS20860 () | 4485047..4485271 | + | 225 | WP_006521313.1 | hypothetical protein | - |
| DESGI_RS20865 () | 4485261..4485693 | + | 433 | Protein_4187 | DUF1492 domain-containing protein | - |
| DESGI_RS20870 () | 4485801..4486007 | + | 207 | WP_006521311.1 | hypothetical protein | - |
| DESGI_RS24140 () | 4486284..4486667 | + | 384 | WP_015618022.1 | HNH endonuclease | - |
| DESGI_RS20885 () | 4486710..4486982 | - | 273 | WP_006521309.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| DESGI_RS20890 () | 4486969..4487244 | - | 276 | WP_006521308.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DESGI_RS23435 () | 4487505..4488899 | + | 1395 | WP_006521307.1 | DNA modification methylase | - |
| DESGI_RS20910 () | 4488903..4490126 | + | 1224 | WP_015618023.1 | DNA modification methylase | - |
| DESGI_RS20915 () | 4490195..4490959 | + | 765 | WP_006524197.1 | hypothetical protein | - |
| DESGI_RS20920 () | 4490960..4491148 | + | 189 | WP_006524198.1 | hypothetical protein | - |
| DESGI_RS20925 () | 4491287..4492195 | + | 909 | WP_006524199.1 | amidoligase family protein | - |
| DESGI_RS20930 () | 4492256..4492594 | + | 339 | WP_006524200.1 | hypothetical protein | - |
| DESGI_RS24145 () | 4492686..4493389 | + | 704 | Protein_4198 | gamma-glutamylcyclotransferase | - |
| DESGI_RS20945 () | 4493440..4493913 | + | 474 | WP_006524788.1 | phage terminase small subunit P27 family | - |
| DESGI_RS20950 () | 4493936..4495498 | + | 1563 | WP_041285027.1 | terminase large subunit | - |
| DESGI_RS20955 () | 4495568..4495879 | + | 312 | WP_006524757.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| DESGI_RS20960 () | 4495869..4496198 | + | 330 | WP_006524758.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DESGI_RS20965 () | 4496280..4497509 | + | 1230 | WP_083940044.1 | phage portal protein | - |
| DESGI_RS20970 () | 4497502..4498215 | + | 714 | WP_006524760.1 | Clp protease ClpP | - |
| DESGI_RS20975 () | 4498222..4499154 | + | 933 | Protein_4205 | phage major capsid protein | - |
| DESGI_RS20980 () | 4499866..4501686 | + | 1821 | WP_006524762.1 | group II intron reverse transcriptase/maturase | - |
| DESGI_RS20985 () | 4501783..4502046 | + | 264 | Protein_4207 | phage major capsid protein | - |
| DESGI_RS24150 () | 4502057..4502743 | + | 687 | WP_006524210.1 | Gellan lyase | VF |
| DESGI_RS20995 () | 4502765..4503067 | + | 303 | WP_006524211.1 | head-tail connector protein | - |
| DESGI_RS21000 () | 4503067..4503399 | + | 333 | WP_006524212.1 | phage head closure protein | - |
| DESGI_RS21005 () | 4503392..4503763 | + | 372 | WP_006524213.1 | HK97 gp10 family phage protein | - |
| DESGI_RS21010 () | 4503766..4504086 | + | 321 | WP_207638413.1 | hypothetical protein | - |
| DESGI_RS21015 () | 4504087..4504653 | + | 567 | WP_006524521.1 | tail protein | - |
| DESGI_RS21020 () | 4504658..4504957 | + | 300 | WP_006524520.1 | hypothetical protein | - |
| DESGI_RS25235 () | 4504969..4505124 | + | 156 | WP_006524519.1 | hypothetical protein | - |
| DESGI_RS21025 () | 4505209..4505475 | + | 267 | WP_006524518.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| DESGI_RS21030 () | 4505462..4505782 | + | 321 | WP_006524517.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| DESGI_RS21035 () | 4505833..4509261 | + | 3429 | WP_006524516.1 | phage tail tape measure protein | - |
| DESGI_RS21040 () | 4509272..4510123 | + | 852 | WP_006524515.1 | phage tail family protein | - |
| DESGI_RS21045 () | 4510138..4511208 | + | 1071 | WP_006524514.1 | hypothetical protein | - |
| DESGI_RS21050 () | 4511210..4512007 | + | 798 | WP_006524513.1 | hypothetical protein | - |
| DESGI_RS21055 () | 4512000..4513862 | + | 1863 | WP_006524512.1 | PQQ-binding-like beta-propeller repeat protein | - |
| DESGI_RS21060 () | 4513877..4514155 | + | 279 | WP_006524511.1 | hypothetical protein | - |
| DESGI_RS25240 () | 4514155..4514295 | + | 141 | WP_006524510.1 | hypothetical protein | - |
| DESGI_RS21065 () | 4514369..4515079 | + | 711 | WP_006524509.1 | hypothetical protein | - |
| DESGI_RS21070 () | 4515106..4516203 | + | 1098 | WP_006524508.1 | siphovirus ReqiPepy6 Gp37-like family protein | - |
| DESGI_RS21075 () | 4516251..4516661 | + | 411 | WP_006524507.1 | phage holin family protein | - |
| DESGI_RS21080 () | 4516654..4517340 | + | 687 | WP_006524506.1 | N-acetylmuramoyl-L-alanine amidase | - |
| DESGI_RS21085 () | 4517472..4518329 | + | 858 | WP_006524505.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| DESGI_RS21090 () | 4518344..4519129 | + | 786 | WP_006524504.1 | hypothetical protein | - |
| DESGI_RS21095 () | 4519201..4519467 | + | 267 | WP_006524503.1 | DUF4160 domain-containing protein | - |
| DESGI_RS21100 () | 4519480..4519719 | + | 240 | WP_006524231.1 | DUF2442 domain-containing protein | - |
| DESGI_RS21105 () | 4519847..4522528 | + | 2682 | WP_157872838.1 | Ig-like domain-containing protein | - |
| DESGI_RS24940 () | 4524087..4524332 | - | 246 | WP_157872839.1 | hypothetical protein | - |
| DESGI_RS21110 () | 4525228..4526037 | - | 810 | WP_083939992.1 | hypothetical protein ; Integrase | Integrase |
| DESGI_RS21115 () | 4526027..4526908 | - | 882 | WP_006524500.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DESGI_RS21125 () | 4527764..4528789 | + | 1026 | WP_006524499.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DESGI_RS21130 () | 4528844..4529284 | + | 441 | WP_041285030.1 | hypothetical protein | - |
| DESGI_RS21135 () | 4529322..4530362 | + | 1041 | WP_006524497.1 | bacteriophage abortive infection AbiH family protein | - |
| DESGI_RS21140 () | 4530694..4531188 | + | 495 | WP_006524496.1 | sigma-70 family RNA polymerase sigma factor | - |
| DESGI_RS21145 () | 4531228..4531503 | + | 276 | WP_207638343.1 | DUF2815 family protein | - |
| DESGI_RS25245 () | 4531641..4531928 | + | 288 | WP_207638344.1 | hypothetical protein | - |
| DESGI_RS21155 () | 4531925..4532161 | + | 237 | WP_006524494.1 | hypothetical protein | - |
| DESGI_RS21160 () | 4532293..4533261 | + | 969 | WP_006524493.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DESGI_RS21165 () | 4533975..4534424 | + | 450 | WP_006524492.1 | S-layer protein | - |
| DESGI_RS24945 () | 4534553..4534708 | + | 156 | WP_006524491.1 | hypothetical protein | - |
| DESGI_RS21170 () | 4534913..4537213 | + | 2301 | WP_006524490.1 | peptidase C11 | - |
| DESGI_RS24155 () | 4537481..4538908 | + | 1428 | WP_006524489.1 | YbhB/YbcL family Raf kinase inhibitor-like protein | - |
| DESGI_RS21180 () | 4539649..4541166 | + | 1518 | WP_006524487.1 | IS5 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|