MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 131012 bp
Accession: NC_021175 Location: 789608..920619 Organism: Streptococcus oligofermentans AS 1.3089 Replicon: chromosome
Accession: NC_021175 Location: 789608..920619 Organism: Streptococcus oligofermentans AS 1.3089 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I872_RS03775 () | 785453..786430 | + | 978 | WP_015604824.1 | YvcK family protein | - |
| I872_RS03780 () | 786427..787338 | + | 912 | WP_015604825.1 | DNA-binding protein WhiA | - |
| I872_RS03785 () | 787371..788339 | - | 969 | WP_015604826.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| I872_RS03790 () | 788449..789765 | - | 1317 | WP_015604827.1 | FAD-containing oxidoreductase | - |
| I872_RS03795 () | 789958..790314 | + | 357 | WP_015604828.1 | DUF1304 family protein | - |
| I872_RS03800 () | 790427..790804 | + | 378 | WP_015604829.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| I872_RS12070 () | 790820..791298 | + | 479 | Protein_725 | peptidase | - |
| I872_RS12075 () | 791278..791574 | + | 297 | Protein_726 | DUF4956 domain-containing protein | - |
| I872_RS03815 () | 791812..792327 | + | 516 | WP_095666416.1 | class I SAM-dependent methyltransferase | - |
| I872_RS03820 () | 792341..792964 | + | 624 | WP_015604832.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| I872_RS03825 () | 793138..793506 | + | 369 | WP_015604833.1 | hypothetical protein | - |
| I872_RS03830 () | 793520..793829 | + | 310 | Protein_730 | hypothetical protein | - |
| I872_RS03835 () | 793834..794217 | + | 384 | WP_015604835.1 | hypothetical protein | - |
| I872_RS11590 () | 794253..794444 | + | 192 | WP_041826790.1 | hypothetical protein | - |
| I872_RS03845 () | 794444..795568 | + | 1125 | WP_015604836.1 | replication initiator protein A | - |
| I872_RS03850 () | 796040..796357 | + | 318 | WP_015604837.1 | hypothetical protein | - |
| I872_RS03855 () | 796611..799217 | + | 2607 | WP_015604838.1 | SEC10/PgrA surface exclusion domain-containing protein | - |
| I872_RS03860 () | 799362..799937 | + | 576 | WP_015604839.1 | hypothetical protein | - |
| I872_RS03865 () | 799978..801210 | + | 1233 | WP_167320507.1 | MucBP domain-containing protein | - |
| I872_RS03870 () | 801224..804907 | + | 3684 | WP_015604841.1 | hypothetical protein | VF |
| I872_RS03875 () | 804978..805391 | + | 414 | WP_015604842.1 | hypothetical protein | - |
| I872_RS03880 () | 805721..806470 | + | 750 | WP_015604843.1 | hypothetical protein | - |
| I872_RS03885 () | 806521..806895 | + | 375 | WP_015604844.1 | hypothetical protein | - |
| I872_RS03890 () | 806837..809200 | + | 2364 | WP_015604845.1 | DUF87 domain-containing protein | - |
| I872_RS03895 () | 809211..811934 | + | 2724 | WP_015604846.1 | CHAP domain-containing protein | - |
| I872_RS03900 () | 811947..812600 | + | 654 | WP_015604847.1 | hypothetical protein | - |
| I872_RS03905 () | 812611..812850 | + | 240 | WP_015604848.1 | hypothetical protein | - |
| I872_RS03910 () | 812843..813715 | + | 873 | WP_015604849.1 | hypothetical protein | - |
| I872_RS03915 () | 813717..814265 | + | 549 | WP_015604850.1 | hypothetical protein | - |
| I872_RS03920 () | 814262..816097 | + | 1836 | WP_015604851.1 | type IV secretory system conjugative DNA transfer family protein | - |
| I872_RS03925 () | 816115..816360 | + | 246 | WP_015604852.1 | hypothetical protein | - |
| I872_RS03930 () | 816426..817511 | + | 1086 | WP_015604853.1 | hypothetical protein | - |
| I872_RS03935 () | 817569..817796 | + | 228 | WP_015604854.1 | hypothetical protein | - |
| I872_RS03940 () | 817793..819148 | + | 1356 | WP_015604855.1 | hypothetical protein | - |
| I872_RS11595 () | 819161..820666 | + | 1506 | Protein_753 | toprim domain-containing protein | - |
| I872_RS11600 () | 821111..823471 | + | 2361 | Protein_754 | hypothetical protein | - |
| I872_RS03950 () | 823520..823825 | + | 306 | WP_015604857.1 | hypothetical protein | - |
| I872_RS03955 () | 824048..824416 | + | 369 | WP_015604858.1 | plasmid mobilization relaxosome protein MobC | - |
| I872_RS03960 () | 824407..826083 | + | 1677 | WP_015604859.1 | relaxase/mobilization nuclease domain-containing protein | - |
| I872_RS03965 () | 826168..826737 | + | 570 | WP_015604860.1 | hypothetical protein | - |
| I872_RS03970 () | 826734..827540 | + | 807 | WP_015604861.1 | ParA family protein | - |
| I872_RS03975 () | 827593..827820 | + | 228 | WP_015604862.1 | hypothetical protein | - |
| I872_RS03980 () | 827883..828740 | + | 858 | WP_015604863.1 | hypothetical protein | VF |
| I872_RS03985 () | 828963..830318 | + | 1356 | WP_015604864.1 | hypothetical protein ; Integrase | Integrase |
| I872_RS03990 () | 830663..830839 | + | 177 | WP_000048054.1 | 30S ribosomal protein S21 | - |
| I872_RS03995 () | 831090..831476 | - | 387 | WP_015604866.1 | large conductance mechanosensitive channel protein MscL | - |
| I872_RS04000 () | 831611..833416 | + | 1806 | WP_041826791.1 | DNA primase | - |
| I872_RS04005 () | 833419..834531 | + | 1113 | WP_002895944.1 | RNA polymerase sigma factor RpoD | - |
| I872_RS04010 () | 834658..834996 | + | 339 | WP_015604868.1 | metal-sulfur cluster assembly factor | - |
| I872_RS04015 () | 835220..836155 | - | 936 | WP_015604869.1 | bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA | - |
| I872_RS04020 () | 836170..837171 | - | 1002 | WP_015604870.1 | LacI family DNA-binding transcriptional regulator | - |
| I872_RS04025 () | 837370..838548 | + | 1179 | WP_015604871.1 | galactokinase | - |
| I872_RS04030 () | 838767..840251 | + | 1485 | WP_015604872.1 | UDP-glucose--hexose-1-phosphate uridylyltransferase | - |
| I872_RS04035 () | 840329..841330 | + | 1002 | WP_015604873.1 | ADP-L-glycero-D-manno-heptose-6-epimerase | VF |
| I872_RS04040 () | 841470..842396 | + | 927 | WP_041826792.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| I872_RS04045 () | 842516..842914 | + | 399 | WP_015604875.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| I872_RS04050 () | 842923..843195 | + | 273 | Protein_775 | UPF0223 family protein | - |
| I872_RS04055 () | 843185..843955 | + | 771 | WP_015604877.1 | inositol monophosphatase family protein | - |
| I872_RS04060 () | 843957..845270 | + | 1314 | WP_015604878.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| I872_RS04065 () | 845370..846251 | + | 882 | WP_015604879.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| I872_RS04070 () | 846248..847165 | + | 918 | WP_015604880.1 | phosphate ABC transporter permease subunit PstC | - |
| I872_RS04075 () | 847155..848039 | + | 885 | WP_015604881.1 | phosphate ABC transporter permease PstA | - |
| I872_RS04080 () | 848050..848853 | + | 804 | WP_015604882.1 | phosphate ABC transporter ATP-binding protein | - |
| I872_RS04085 () | 848881..849639 | + | 759 | WP_015604883.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| I872_RS04090 () | 849690..850343 | + | 654 | WP_015604884.1 | phosphate signaling complex protein PhoU | - |
| I872_RS04095 () | 850824..851387 | + | 564 | WP_095666450.1 | hypothetical protein | - |
| I872_RS04100 () | 851532..852185 | + | 654 | WP_015604886.1 | hypothetical protein | - |
| I872_RS04105 () | 852241..852867 | + | 627 | WP_167320508.1 | hypothetical protein | - |
| I872_RS04110 () | 853054..853644 | + | 591 | WP_041826794.1 | hypothetical protein | - |
| I872_RS04115 () | 853817..854410 | + | 594 | WP_041826795.1 | hypothetical protein | - |
| I872_RS04120 () | 854412..855818 | + | 1407 | WP_015604890.1 | hypothetical protein | - |
| I872_RS04125 () | 855829..856125 | + | 297 | WP_015604891.1 | hypothetical protein | - |
| I872_RS04130 () | 856134..856454 | + | 321 | WP_015604892.1 | hypothetical protein | - |
| I872_RS04135 () | 856701..859244 | + | 2544 | WP_015604893.1 | M1 family metallopeptidase | - |
| I872_RS04140 () | 859629..860051 | + | 423 | WP_041826796.1 | hypothetical protein | - |
| I872_RS04145 () | 860172..860846 | + | 675 | WP_015604895.1 | Regulator of RpoS | VF |
| I872_RS04150 () | 860836..862200 | + | 1365 | WP_015604896.1 | HAMP domain-containing histidine kinase | - |
| I872_RS04155 () | 862275..862661 | + | 387 | WP_015604897.1 | VOC family protein | - |
| I872_RS04160 () | 862750..864147 | + | 1398 | WP_015604898.1 | hypothetical protein | VF |
| I872_RS04165 () | 864229..865344 | - | 1116 | WP_041826797.1 | DEAD/DEAH box helicase | - |
| I872_RS04170 () | 865310..866289 | - | 980 | Protein_799 | Gfo/Idh/MocA family oxidoreductase | - |
| I872_RS04175 () | 866394..867029 | + | 636 | WP_005591973.1 | uridine kinase | - |
| I872_RS04180 () | 867039..867737 | + | 699 | WP_148284582.1 | DUF1275 domain-containing protein | - |
| I872_RS04185 () | 867781..868451 | + | 671 | Protein_802 | DUF443 family protein | - |
| I872_RS04190 () | 868486..869146 | + | 661 | Protein_803 | DUF443 family protein | - |
| I872_RS04195 () | 869188..869862 | + | 675 | WP_015604904.1 | hypothetical protein | - |
| I872_RS04200 () | 869855..870154 | + | 300 | WP_015604905.1 | DUF4176 domain-containing protein | - |
| I872_RS04205 () | 870246..870455 | + | 210 | WP_015604906.1 | hypothetical protein | - |
| I872_RS04210 () | 870430..871125 | + | 696 | WP_015604907.1 | TipC family immunity protein | - |
| I872_RS12015 () | 871327..871494 | + | 168 | WP_167320509.1 | hypothetical protein | - |
| I872_RS04215 () | 871496..872194 | + | 699 | WP_015604908.1 | TipC family immunity protein | - |
| I872_RS04220 () | 872434..873438 | + | 1005 | WP_041826798.1 | hypothetical protein | - |
| I872_RS04225 () | 873989..875554 | + | 1566 | WP_015604910.1 | 2-isopropylmalate synthase | - |
| I872_RS04230 () | 875567..876604 | + | 1038 | WP_015604911.1 | 3-isopropylmalate dehydrogenase | - |
| I872_RS04235 () | 876601..876867 | + | 267 | WP_002895724.1 | DUF1294 domain-containing protein | - |
| I872_RS04240 () | 876869..878251 | + | 1383 | WP_015604912.1 | 3-isopropylmalate dehydratase large subunit | - |
| I872_RS04245 () | 878261..878850 | + | 590 | Protein_815 | 3-isopropylmalate dehydratase small subunit | - |
| I872_RS04250 () | 878950..879729 | + | 780 | WP_015604915.1 | hypothetical protein | - |
| I872_RS04255 () | 879904..880341 | + | 438 | WP_015604916.1 | MarR family transcriptional regulator | - |
| I872_RS04260 () | 880345..881109 | + | 765 | WP_015604917.1 | nuclear transport factor 2 family protein | - |
| I872_RS04265 () | 881124..881852 | + | 729 | WP_015604918.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| I872_RS04270 () | 881845..883365 | + | 1521 | WP_015604919.1 | ABC transporter permease/substrate-binding protein | - |
| I872_RS04275 () | 883501..883817 | + | 317 | Protein_821 | TfoX/Sxy family protein | - |
| I872_RS04280 () | 883908..884573 | + | 666 | WP_015604922.1 | transcriptional regulator | - |
| I872_RS04285 () | 884570..885307 | + | 738 | Protein_823 | DUF3307 domain-containing protein | - |
| I872_RS04290 () | 885382..885963 | + | 582 | WP_015604923.1 | GrpB family protein | - |
| I872_RS04295 () | 886170..887021 | + | 852 | WP_015604924.1 | alpha/beta hydrolase | - |
| I872_RS04300 () | 887191..888171 | + | 981 | WP_015604925.1 | DUF1002 domain-containing protein | - |
| I872_RS04305 () | 888329..889567 | - | 1239 | WP_015604926.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| I872_RS04310 () | 889567..889749 | - | 183 | WP_197712457.1 | DUF3173 domain-containing protein | - |
| I872_RS04315 () | 890021..891382 | - | 1362 | WP_015604928.1 | hypothetical protein | - |
| I872_RS04320 () | 891798..892809 | - | 1012 | Protein_830 | hypothetical protein ; Integrase | Integrase |
| I872_RS04325 () | 893682..894044 | + | 363 | WP_000479225.1 | hypothetical protein | - |
| I872_RS04330 () | 894262..894738 | + | 477 | WP_015604930.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| I872_RS04335 () | 894738..895505 | + | 768 | WP_015604931.1 | zeta toxin family protein | Toxin Detail |
| I872_RS04340 () | 895864..896097 | + | 234 | WP_006145693.1 | hypothetical protein | - |
| I872_RS04345 () | 896118..896672 | + | 555 | WP_015604932.1 | hypothetical protein | - |
| I872_RS04350 () | 896742..897164 | + | 423 | WP_015604933.1 | hypothetical protein | - |
| I872_RS04355 () | 897306..897638 | + | 333 | Protein_837 | hypothetical protein | - |
| I872_RS10880 () | 897648..897968 | + | 321 | Protein_838 | hypothetical protein | - |
| I872_RS12080 () | 897987..898297 | + | 311 | Protein_839 | hypothetical protein | - |
| I872_RS04370 () | 898321..898653 | + | 333 | WP_015604936.1 | hypothetical protein | - |
| I872_RS04375 () | 898706..899179 | + | 474 | WP_015604937.1 | SMI1/KNR4 family protein | - |
| I872_RS04380 () | 899269..899604 | + | 336 | WP_015604938.1 | hypothetical protein | - |
| I872_RS04385 () | 899646..900047 | + | 402 | WP_015604939.1 | hypothetical protein | - |
| I872_RS04390 () | 900093..900443 | + | 351 | WP_015604940.1 | hypothetical protein | - |
| I872_RS04395 () | 900462..900815 | + | 354 | WP_015604941.1 | hypothetical protein | - |
| I872_RS04400 () | 900836..901183 | + | 348 | WP_041826799.1 | hypothetical protein | - |
| I872_RS04405 () | 901206..901556 | + | 351 | WP_041826800.1 | hypothetical protein | - |
| I872_RS04410 () | 901575..901931 | + | 357 | WP_015604944.1 | hypothetical protein | - |
| I872_RS10885 () | 901966..902613 | + | 648 | WP_015604945.1 | hypothetical protein | - |
| I872_RS04425 () | 902773..903432 | + | 660 | WP_015604946.1 | hypothetical protein | - |
| I872_RS04430 () | 903508..903957 | + | 450 | Protein_851 | LacI family DNA-binding transcriptional regulator | - |
| I872_RS04435 () | 904963..905166 | + | 204 | WP_003010127.1 | hypothetical protein | - |
| I872_RS04440 () | 905159..906145 | + | 987 | WP_015604948.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| I872_RS04445 () | 906142..906935 | + | 794 | Protein_854 | ABC-2 family transporter protein | - |
| I872_RS04450 () | 906937..907722 | + | 786 | WP_041826889.1 | ABC-2 family transporter protein | - |
| I872_RS04455 () | 908170..909729 | - | 1560 | WP_015604951.1 | glutamine-hydrolyzing GMP synthase | - |
| I872_RS04460 () | 909969..910667 | + | 699 | WP_015604952.1 | GntR family transcriptional regulator | - |
| I872_RS04465 () | 910783..911115 | + | 333 | WP_005590307.1 | putative DNA-binding protein | - |
| I872_RS04470 () | 911171..912739 | + | 1569 | WP_015604953.1 | Signal recognition particle 54 kDa protein | VF |
| I872_RS04475 () | 912800..913591 | + | 792 | WP_015604954.1 | alpha/beta hydrolase | - |
| I872_RS04480 () | 913641..914084 | + | 444 | WP_015604955.1 | MepB family protein | - |
| I872_RS04485 () | 914266..915336 | + | 1071 | WP_015604956.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| I872_RS04490 () | 915414..916046 | - | 633 | WP_015604957.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| I872_RS04495 () | 916048..918057 | - | 2010 | WP_015604958.1 | bacteriocin-associated integral membrane family protein | - |
| I872_RS04500 () | 918370..919359 | - | 990 | WP_015604959.1 | Lipoate-protein ligase A | VF |
| I872_RS04505 () | 919374..921077 | - | 1704 | WP_015604960.1 | dihydrolipoyl dehydrogenase | - |
| I872_RS04510 () | 921150..922193 | - | 1044 | WP_015604961.1 | dihydrolipoamide acetyltransferase | - |
| I872_RS04515 () | 922413..923405 | - | 993 | WP_015604962.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| I872_RS04520 () | 923424..924392 | - | 969 | WP_015604963.1 | thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|