MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 118287 bp
Accession: NC_020909 Location: 1..118287 Organism: Octadecabacter arcticus 238 Replicon: plasmid pOA238_118
Accession: NC_020909 Location: 1..118287 Organism: Octadecabacter arcticus 238 Replicon: plasmid pOA238_118
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OA238_RS26935 () | 101..1468 | + | 1368 | WP_015497606.1 | RepB family plasmid replication initiator protein | - |
| OA238_RS26940 () | 1483..1740 | - | 258 | WP_044039045.1 | hypothetical protein | - |
| OA238_RS26945 () | 1733..2371 | - | 639 | WP_015497607.1 | hypothetical protein | - |
| OA238_RS26950 () | 2584..2901 | - | 318 | WP_015497608.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OA238_RS26955 () | 2913..3167 | - | 255 | WP_044039103.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| OA238_RS33235 () | 3276..3443 | - | 168 | WP_187293215.1 | hypothetical protein | - |
| OA238_RS26965 () | 4019..5566 | + | 1548 | Protein_6 | IS3 family transposase ISPa31 | Transposase |
| OA238_RS33240 () | 5585..5758 | - | 174 | WP_187293216.1 | hypothetical protein | - |
| OA238_RS26975 () | 5890..7065 | - | 1176 | WP_085982822.1 | ISL3 family transposase ISVa7 | Transposase |
| OA238_RS33245 () | 7626..7778 | + | 153 | WP_187293219.1 | hypothetical protein | - |
| OA238_RS26980 () | 8124..8417 | + | 294 | Protein_10 | transposase domain-containing protein | - |
| OA238_RS31070 () | 8495..8698 | + | 204 | Protein_11 | IS66 family transposase | - |
| OA238_RS26985 () | 8842..9801 | - | 960 | Protein_12 | IS66 family transposase ISCARN48 | Transposase |
| OA238_RS26990 () | 9858..11141 | - | 1284 | WP_015494284.1 | IS256 family transposase ISOan3 | Transposase |
| OA238_RS26995 () | 11240..11914 | - | 675 | Protein_14 | IS66 family transposase ISPre3 | Transposase |
| OA238_RS27000 () | 11984..12331 | - | 348 | WP_015497614.1 | IS66 family transposase ISCro1 | Transposase |
| OA238_RS27005 () | 12328..12684 | - | 357 | WP_015497615.1 | IS66 family transposase ISPpa5 | Transposase |
| OA238_RS32335 () | 12779..12979 | + | 201 | Protein_17 | IS66 family transposase ISBrsp5 | Transposase |
| OA238_RS27015 () | 13101..13904 | + | 804 | WP_015497616.1 | Flagellar basal-body rod protein FlgG | VF |
| OA238_RS27020 () | 14170..14445 | + | 276 | WP_044039053.1 | IS3 family transposase ISRhba2 | Transposase |
| OA238_RS27025 () | 14495..14899 | - | 405 | WP_015497618.1 | hypothetical protein | - |
| OA238_RS27030 () | 14961..15704 | - | 744 | WP_144056086.1 | hypothetical protein | - |
| OA238_RS27035 () | 15708..17255 | - | 1548 | WP_015497620.1 | hypothetical protein | VF |
| OA238_RS27040 () | 17252..17662 | - | 411 | WP_015497621.1 | Glycerol-3-phosphate cytidylyltransferase | VF |
| OA238_RS27045 () | 17722..18567 | - | 846 | WP_015497622.1 | Flagellin | VF |
| OA238_RS27050 () | 18849..19460 | + | 612 | WP_144056087.1 | hypothetical protein | - |
| OA238_RS27055 () | 19412..19831 | - | 420 | WP_044039059.1 | hypothetical protein | - |
| OA238_RS27060 () | 19850..20107 | - | 258 | WP_015497625.1 | hypothetical protein | - |
| OA238_RS27065 () | 20107..20445 | - | 339 | WP_015497626.1 | flagellar biosynthesis anti-sigma factor FlgM | - |
| OA238_RS27070 () | 20482..21192 | - | 711 | WP_144056097.1 | flagellar basal body P-ring formation protein FlgA | - |
| OA238_RS27080 () | 21548..22693 | - | 1146 | WP_015497629.1 | flagellar assembly protein T N-terminal domain-containing protein | - |
| OA238_RS27085 () | 22709..23209 | - | 501 | WP_044039061.1 | hypothetical protein | VF |
| OA238_RS27090 () | 23379..25487 | + | 2109 | WP_015497631.1 | Flagellar biosynthesis protein FlhA | VF |
| OA238_RS27095 () | 25540..26988 | + | 1449 | WP_015497632.1 | hypothetical protein | - |
| OA238_RS27100 () | 27061..27426 | + | 366 | WP_044039110.1 | hypothetical protein | VF |
| OA238_RS27105 () | 27407..27733 | + | 327 | WP_044039063.1 | hypothetical protein | - |
| OA238_RS29480 () | 27761..28402 | + | 642 | WP_051076668.1 | CBS domain-containing protein | - |
| OA238_RS27115 () | 28552..28935 | + | 384 | WP_044039115.1 | hypothetical protein | - |
| OA238_RS27120 () | 28936..29421 | - | 486 | WP_187293217.1 | DUF1566 domain-containing protein | - |
| OA238_RS27125 () | 29520..30281 | + | 762 | WP_015497637.1 | Chemotaxis protein PomA | VF |
| OA238_RS27130 () | 30309..31544 | + | 1236 | WP_015497638.1 | Outer membrane porin F | VF |
| OA238_RS27135 () | 31658..32503 | + | 846 | WP_144056088.1 | Arm DNA-binding domain-containing protein | - |
| OA238_RS27140 () | 32506..33318 | + | 813 | WP_015497640.1 | IS21 family transposase ISCARN4 | Transposase |
| OA238_RS27145 () | 33467..34825 | - | 1359 | WP_015497641.1 | RNA polymerase factor sigma-54 | - |
| OA238_RS33250 () | 35105..35368 | - | 264 | WP_015497642.1 | hypothetical protein | - |
| OA238_RS27155 () | 35408..36169 | - | 762 | WP_015497643.1 | hypothetical protein | - |
| OA238_RS27160 () | 36166..36978 | - | 813 | WP_015497644.1 | hypothetical protein | - |
| OA238_RS27170 () | 37420..38574 | - | 1155 | WP_015497646.1 | Flagellar biosynthetic protein FlhB | VF |
| OA238_RS27175 () | 38567..39394 | - | 828 | WP_144056089.1 | hypothetical protein | VF |
| OA238_RS27180 () | 39391..39657 | - | 267 | WP_015497648.1 | hypothetical protein | VF |
| OA238_RS27185 () | 39660..40445 | - | 786 | WP_083906916.1 | Flagellar biosynthetic protein FliP | VF |
| OA238_RS27190 () | 40751..41053 | - | 303 | WP_015497651.1 | Flagellar motor switch protein FliN | VF |
| OA238_RS27195 () | 41330..42301 | - | 972 | WP_015497652.1 | flagellar motor switch protein FliM | - |
| OA238_RS27200 () | 42316..42900 | - | 585 | WP_015497653.1 | flagellar basal body-associated FliL family protein | - |
| OA238_RS27205 () | 42922..44973 | - | 2052 | WP_015497654.1 | flagellar hook-length control protein FliK | - |
| OA238_RS27210 () | 45078..45476 | - | 399 | WP_144056098.1 | hypothetical protein | - |
| OA238_RS27215 () | 45500..46834 | - | 1335 | WP_015497656.1 | Flagellum-specific ATP synthase | VF |
| OA238_RS27220 () | 46834..47730 | - | 897 | WP_015497657.1 | hypothetical protein | - |
| OA238_RS27225 () | 47730..48770 | - | 1041 | WP_015497658.1 | Flagellar motor switch protein FliG | VF |
| OA238_RS27230 () | 48793..50592 | - | 1800 | WP_015497659.1 | Flagellar M-ring protein | VF |
| OA238_RS27235 () | 50638..50979 | - | 342 | WP_015497660.1 | Flagellar hook-basal body complex protein FliE | VF |
| OA238_RS27240 () | 50976..52091 | - | 1116 | WP_144056099.1 | Nif-specific regulatory protein | VF |
| OA238_RS27245 () | 52348..53391 | + | 1044 | WP_015497662.1 | DNA-binding transcriptional regulator NtrC | VF |
| OA238_RS27250 () | 53449..53850 | - | 402 | WP_015497663.1 | hypothetical protein | - |
| OA238_RS27255 () | 53873..54592 | - | 720 | WP_015497664.1 | RNA polymerase sigma factor FliA | VF |
| OA238_RS27260 () | 54606..55394 | - | 789 | WP_015497665.1 | Flagellum site-determining protein YlxH | VF |
| OA238_RS27265 () | 55667..57088 | + | 1422 | Protein_66 | IS66 family transposase ISBrsp5 | Transposase |
| OA238_RS27270 () | 57157..58101 | + | 945 | Protein_67 | IS110 family transposase ISHne5 | Transposase |
| OA238_RS27275 () | 58240..59181 | - | 942 | WP_015497668.1 | hypothetical protein | - |
| OA238_RS27280 () | 59168..60925 | - | 1758 | WP_144056091.1 | chloride channel protein | - |
| OA238_RS27285 () | 60971..62611 | - | 1641 | WP_044039067.1 | flagellar filament capping protein FliD | - |
| OA238_RS27295 () | 63064..63705 | - | 642 | WP_015497672.1 | hypothetical protein | - |
| OA238_RS27300 () | 63780..64166 | + | 387 | WP_015497673.1 | Flagellar basal body rod protein FlgB | VF |
| OA238_RS27305 () | 64166..64585 | + | 420 | WP_015497674.1 | Flagellar basal-body rod protein FlgC | VF |
| OA238_RS27310 () | 64598..65299 | + | 702 | WP_015497675.1 | Basal-body rod modification protein FlgD | VF |
| OA238_RS27315 () | 65333..69565 | + | 4233 | WP_015497676.1 | Flagellar hook protein FlgE | VF |
| OA238_RS27320 () | 69624..70385 | + | 762 | WP_015497677.1 | flagellar hook-basal body complex protein | - |
| OA238_RS27325 () | 70453..71238 | + | 786 | WP_044039069.1 | Flagellar basal-body rod protein FlgG | VF |
| OA238_RS27330 () | 71255..71899 | + | 645 | WP_015497679.1 | Flagellar L-ring protein | VF |
| OA238_RS27335 () | 71908..73041 | + | 1134 | WP_044039120.1 | Flagellar P-ring protein | VF |
| OA238_RS27340 () | 73065..73403 | + | 339 | WP_015497681.1 | Peptidoglycan hydrolase FlgJ | VF |
| OA238_RS27345 () | 73404..77714 | + | 4311 | WP_015497682.1 | flagellar hook-associated protein FlgK | - |
| OA238_RS27350 () | 77723..78994 | + | 1272 | WP_083906917.1 | Flagellar hook-associated protein 3 | VF |
| OA238_RS27355 () | 79380..79994 | + | 615 | WP_187293213.1 | DUF882 domain-containing protein | - |
| OA238_RS27365 () | 80290..81459 | - | 1170 | WP_083906918.1 | ISAs1 family transposase ISOan1 | Transposase |
| OA238_RS31085 () | 81516..81920 | - | 405 | Protein_85 | transposase | - |
| OA238_RS27375 () | 82052..82864 | - | 813 | WP_015497686.1 | IS21 family transposase ISRel5 | Transposase |
| OA238_RS33255 () | 82861..83085 | - | 225 | WP_044039077.1 | hypothetical protein | - |
| OA238_RS31090 () | 83052..83288 | + | 237 | Protein_88 | transposase | - |
| OA238_RS27385 () | 83359..84774 | - | 1416 | Protein_89 | IS66 family transposase ISArch14 | Transposase |
| OA238_RS27395 () | 84935..86626 | - | 1692 | WP_015497689.1 | hypothetical protein | - |
| OA238_RS32340 () | 86897..87031 | - | 135 | Protein_91 | IS256 family transposase | - |
| OA238_RS27405 () | 87088..88105 | - | 1018 | Protein_92 | IS5 family transposase ISOcan1 | Transposase |
| OA238_RS27410 () | 88116..88946 | - | 831 | WP_015497692.1 | replication initiation protein | - |
| OA238_RS27415 () | 89613..90125 | + | 513 | WP_015495668.1 | IS630 family transposase ISAli3 | Transposase |
| OA238_RS27420 () | 90353..91312 | + | 960 | WP_015496121.1 | IS1595 family transposase ISOar1 | Transposase |
| OA238_RS27425 () | 91418..91636 | + | 219 | WP_015497693.1 | antitoxin MazE family protein | Antitoxin Detail |
| OA238_RS27430 () | 91633..91959 | + | 327 | WP_187293218.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| OA238_RS27435 () | 91980..92291 | - | 312 | WP_015497695.1 | Trans-acting regulatory protein HvrA | VF |
| OA238_RS33260 () | 92323..92472 | - | 150 | WP_187293214.1 | hypothetical protein | - |
| OA238_RS27440 () | 92488..92742 | + | 255 | WP_015497696.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OA238_RS27445 () | 92739..93086 | + | 348 | WP_015497697.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OA238_RS27450 () | 93280..93519 | + | 240 | Protein_102 | IS5 family transposase ISRm33 | Transposase |
| OA238_RS31100 () | 94179..94995 | - | 817 | Protein_103 | IS5 family transposase ISHph1 | Transposase |
| OA238_RS27465 () | 95138..96114 | - | 977 | Protein_104 | IS1595 family transposase ISOan10 | Transposase |
| OA238_RS27470 () | 96201..96407 | - | 207 | Protein_105 | IS5 family transposase ISOcan1 | Transposase |
| OA238_RS27475 () | 96862..98277 | + | 1416 | WP_015495332.1 | IS66 family transposase ISMac24 | Transposase |
| OA238_RS27480 () | 98453..98707 | + | 255 | WP_015497701.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| OA238_RS27485 () | 98707..99132 | + | 426 | WP_015497702.1 | type II toxin-antitoxin system VapC family toxin | - |
| OA238_RS27495 () | 99524..99955 | - | 432 | WP_015497703.1 | hypothetical protein | - |
| OA238_RS27500 () | 100192..101361 | + | 1170 | WP_083906669.1 | ISAs1 family transposase ISOan1 | Transposase |
| OA238_RS27505 () | 101365..102543 | - | 1179 | WP_015497704.1 | ISL3 family transposase ISVa7 | Transposase |
| OA238_RS27510 () | 102655..103479 | + | 825 | WP_015495875.1 | IS5 family transposase ISRm15 | Transposase |
| OA238_RS29505 () | 104191..104445 | + | 255 | WP_144056093.1 | hypothetical protein | - |
| OA238_RS27515 () | 104450..105118 | + | 669 | WP_015497705.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OA238_RS27520 () | 105416..106492 | + | 1077 | WP_015497706.1 | replication initiator protein A | - |
| OA238_RS27525 () | 106622..107278 | + | 657 | WP_015497707.1 | ParA family protein | - |
| OA238_RS27530 () | 107278..107514 | + | 237 | WP_044039087.1 | hypothetical protein | - |
| OA238_RS27535 () | 107594..107947 | + | 354 | WP_044039089.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OA238_RS27540 () | 107944..108237 | + | 294 | WP_015497709.1 | XRE family transcriptional regulator | - |
| OA238_RS27545 () | 108356..109069 | + | 714 | Protein_120 | IS6 family transposase ISRssp3 | Transposase |
| OA238_RS27550 () | 109142..109402 | - | 261 | WP_015497711.1 | WGR domain-containing protein | - |
| OA238_RS27555 () | 109402..110058 | - | 657 | WP_015497712.1 | hypothetical protein | - |
| OA238_RS33265 () | 110066..110239 | - | 174 | WP_085982821.1 | hypothetical protein | - |
| OA238_RS31105 () | 110387..110707 | + | 321 | WP_144056094.1 | hypothetical protein | - |
| OA238_RS27560 () | 110828..111121 | - | 294 | WP_044039091.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OA238_RS27565 () | 111125..111409 | - | 285 | WP_015497714.1 | hypothetical protein | - |
| OA238_RS29515 () | 111621..113036 | + | 1416 | Protein_127 | IS66 family transposase ISArch14 | Transposase |
| OA238_RS27575 () | 113140..113406 | - | 267 | WP_015497716.1 | hypothetical protein | - |
| OA238_RS27580 () | 113414..114238 | - | 825 | WP_015497717.1 | N-6 DNA methylase | - |
| OA238_RS27585 () | 114379..114777 | - | 399 | WP_015497718.1 | hypothetical protein | - |
| OA238_RS27590 () | 114793..115077 | - | 285 | WP_015497719.1 | hypothetical protein | - |
| OA238_RS27595 () | 115126..115398 | - | 273 | WP_144056095.1 | ribbon-helix-helix domain-containing protein | - |
| OA238_RS29520 () | 115512..116165 | - | 654 | WP_144056096.1 | hypothetical protein | - |
| OA238_RS32350 () | 116197..116535 | - | 339 | Protein_134 | DUF3768 domain-containing protein | - |
| OA238_RS27615 () | 117521..117718 | + | 198 | WP_044039099.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|