MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 139409 bp
Accession: NC_020526 Location: 600643..740051 Organism: Streptococcus suis SC070731 Replicon: chromosome
Accession: NC_020526 Location: 600643..740051 Organism: Streptococcus suis SC070731 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NJAUSS_RS02980 () | 595754..596137 | + | 384 | WP_014636276.1 | hypothetical protein | - |
| NJAUSS_RS02985 () | 596146..596379 | + | 234 | WP_014636277.1 | hypothetical protein | - |
| NJAUSS_RS02990 () | 596382..596966 | + | 585 | WP_014636278.1 | CPBP family intramembrane metalloprotease | - |
| NJAUSS_RS02995 () | 597043..597531 | + | 489 | WP_041179161.1 | hypothetical protein | - |
| NJAUSS_RS03000 () | 597531..599348 | + | 1818 | WP_014636280.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NJAUSS_RS03005 () | 599366..599608 | + | 243 | WP_001072182.1 | hypothetical protein | - |
| NJAUSS_RS03010 () | 599627..600481 | + | 855 | WP_014636281.1 | conjugal transfer protein TrbL | - |
| NJAUSS_RS03015 () | 600543..600896 | + | 354 | WP_014636282.1 | PrgI family protein | - |
| NJAUSS_RS03020 () | 600853..603204 | + | 2352 | WP_014636283.1 | ATPase AAA | - |
| NJAUSS_RS03025 () | 603206..606007 | + | 2802 | WP_015445150.1 | CHAP domain-containing protein | - |
| NJAUSS_RS03030 () | 606093..606557 | - | 465 | WP_014636285.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| NJAUSS_RS03035 () | 606601..607722 | + | 1122 | WP_015445098.1 | IS110 family transposase | - |
| NJAUSS_RS03040 () | 608101..608547 | - | 447 | Protein_543 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| NJAUSS_RS03045 () | 608544..609134 | - | 591 | WP_000037237.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| NJAUSS_RS03050 () | 609304..614199 | + | 4896 | WP_014636287.1 | LPXTG cell wall anchor domain-containing protein | - |
| NJAUSS_RS03055 () | 614200..614391 | + | 192 | WP_014636288.1 | calcium-binding protein | - |
| NJAUSS_RS03060 () | 614375..614926 | + | 552 | WP_014636289.1 | hypothetical protein | - |
| NJAUSS_RS03065 () | 614975..620923 | + | 5949 | WP_014636290.1 | DEAD/DEAH box helicase family protein | - |
| NJAUSS_RS03070 () | 620904..621279 | + | 376 | Protein_549 | TnpV protein | - |
| NJAUSS_RS03075 () | 621646..623565 | + | 1920 | WP_014636291.1 | tetracycline resistance ribosomal protection protein Tet(O) | - |
| NJAUSS_RS03080 () | 623616..624836 | + | 1221 | WP_009247026.1 | tetracycline efflux MFS transporter Tet(40) | - |
| NJAUSS_RS03085 () | 625435..625944 | + | 510 | WP_041179152.1 | sigma-70 family RNA polymerase sigma factor | - |
| NJAUSS_RS03090 () | 626039..626464 | + | 426 | WP_000323896.1 | sigma-70 family RNA polymerase sigma factor | - |
| NJAUSS_RS03095 () | 626548..627021 | + | 474 | WP_000323521.1 | sigma-70 family RNA polymerase sigma factor | - |
| NJAUSS_RS03100 () | 627175..628206 | + | 1032 | WP_001170965.1 | AAA family ATPase | - |
| NJAUSS_RS03105 () | 628725..629690 | + | 966 | WP_001145977.1 | plasmid recombination protein | - |
| NJAUSS_RS03110 () | 629698..630552 | + | 855 | WP_015445155.1 | ParB/RepB/Spo0J family partition protein | - |
| NJAUSS_RS03115 () | 630629..630859 | + | 231 | WP_000659121.1 | hypothetical protein | - |
| NJAUSS_RS03120 () | 630930..631121 | + | 192 | WP_000503424.1 | hypothetical protein | - |
| NJAUSS_RS03125 () | 631175..632947 | + | 1773 | WP_014636293.1 | recombinase family protein | - |
| NJAUSS_RS03130 () | 632914..633873 | + | 960 | Protein_561 | hypothetical protein | - |
| NJAUSS_RS03135 () | 633944..634243 | + | 300 | WP_014636295.1 | hypothetical protein | - |
| NJAUSS_RS03140 () | 634257..634547 | + | 291 | WP_000893083.1 | hypothetical protein | - |
| NJAUSS_RS03145 () | 634642..635280 | + | 639 | WP_014636296.1 | hypothetical protein | - |
| NJAUSS_RS03150 () | 635320..636420 | + | 1101 | WP_014636297.1 | toprim domain-containing protein | - |
| NJAUSS_RS03155 () | 636448..636675 | + | 228 | WP_000110922.1 | hypothetical protein | - |
| NJAUSS_RS03160 () | 636672..637061 | + | 390 | WP_014636298.1 | hypothetical protein | - |
| NJAUSS_RS03165 () | 637111..637401 | + | 291 | WP_000667951.1 | hypothetical protein | - |
| NJAUSS_RS03170 () | 637471..637947 | + | 477 | WP_000578719.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NJAUSS_RS03175 () | 637947..638714 | + | 768 | WP_001235242.1 | zeta toxin family protein | Toxin Detail |
| NJAUSS_RS03180 () | 638751..641258 | + | 2508 | WP_001213955.1 | AAA family ATPase | - |
| NJAUSS_RS03185 () | 641596..641958 | + | 363 | WP_000140674.1 | hypothetical protein | - |
| NJAUSS_RS03190 () | 641961..642326 | + | 366 | WP_000431640.1 | plasmid mobilization relaxosome protein MobC | - |
| NJAUSS_RS03195 () | 642313..644196 | + | 1884 | WP_014636299.1 | relaxase/mobilization nuclease domain-containing protein | - |
| NJAUSS_RS03200 () | 644293..644508 | + | 216 | WP_014636300.1 | hypothetical protein | - |
| NJAUSS_RS03205 () | 644590..645666 | + | 1077 | WP_014636301.1 | S8 family serine peptidase | - |
| NJAUSS_RS03210 () | 645707..646405 | + | 699 | WP_000276750.1 | response regulator transcription factor | - |
| NJAUSS_RS03215 () | 646383..647726 | + | 1344 | WP_000977993.1 | HAMP domain-containing histidine kinase | - |
| NJAUSS_RS03220 () | 647916..648617 | + | 702 | WP_000452012.1 | ABC transporter ATP-binding protein | - |
| NJAUSS_RS03225 () | 648610..649347 | + | 738 | WP_000181737.1 | lantibiotic ABC transporter permease | - |
| NJAUSS_RS03230 () | 649325..650011 | + | 687 | WP_001033677.1 | hypothetical protein | - |
| NJAUSS_RS10650 () | 650359..650526 | + | 168 | WP_001058290.1 | gallidermin/nisin family lantibiotic | - |
| NJAUSS_RS03235 () | 650767..653742 | + | 2976 | WP_014636302.1 | lantibiotic dehydratase | - |
| NJAUSS_RS03240 () | 653723..655531 | + | 1809 | WP_000536729.1 | ABC transporter ATP-binding protein/permease | - |
| NJAUSS_RS03245 () | 655524..656801 | + | 1278 | WP_000344171.1 | lanthionine synthetase C family protein | - |
| NJAUSS_RS03250 () | 656803..657519 | + | 717 | WP_001226539.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| NJAUSS_RS03255 () | 657787..658191 | + | 405 | WP_000878635.1 | sigma-70 family RNA polymerase sigma factor | - |
| NJAUSS_RS03260 () | 658696..660501 | + | 1806 | WP_014636303.1 | recombinase family protein | - |
| NJAUSS_RS03265 () | 660869..661039 | + | 171 | WP_002941306.1 | hypothetical protein | - |
| NJAUSS_RS03270 () | 661426..662643 | + | 1218 | WP_014636304.1 | macrolide efflux MFS transporter Mef(A) | - |
| NJAUSS_RS03275 () | 662763..664226 | + | 1464 | WP_014636305.1 | ABC-F type ribosomal protection protein Msr(D) | - |
| NJAUSS_RS03280 () | 664344..664643 | - | 300 | WP_014636306.1 | hypothetical protein | - |
| NJAUSS_RS03285 () | 664630..664998 | - | 369 | WP_014636307.1 | hypothetical protein | - |
| NJAUSS_RS03290 () | 664995..666410 | - | 1416 | WP_014636308.1 | Y-family DNA polymerase | - |
| NJAUSS_RS11065 () | 666415..666555 | - | 141 | WP_153309563.1 | hypothetical protein | - |
| NJAUSS_RS03295 () | 666533..666760 | - | 228 | WP_014636310.1 | hypothetical protein | - |
| NJAUSS_RS03300 () | 666763..667452 | - | 690 | WP_014636311.1 | XRE family transcriptional regulator | - |
| NJAUSS_RS03305 () | 667728..669551 | + | 1824 | WP_014636313.1 | ImmA/IrrE family metallo-endopeptidase | - |
| NJAUSS_RS03310 () | 669885..670454 | + | 570 | WP_014636314.1 | hypothetical protein | - |
| NJAUSS_RS03315 () | 670493..672448 | - | 1956 | WP_014636315.1 | hypothetical protein | - |
| NJAUSS_RS03320 () | 672683..673231 | - | 549 | WP_014636317.1 | DUF2815 family protein | - |
| NJAUSS_RS03325 () | 673236..674357 | - | 1122 | WP_014636318.1 | DUF2800 domain-containing protein | - |
| NJAUSS_RS03330 () | 674350..674673 | - | 324 | WP_014636319.1 | hypothetical protein | - |
| NJAUSS_RS03335 () | 675072..677357 | + | 2286 | WP_014636321.1 | hypothetical protein | - |
| NJAUSS_RS03340 () | 677642..677923 | + | 282 | WP_014636322.1 | VRR-NUC domain-containing protein | - |
| NJAUSS_RS03345 () | 677904..679280 | + | 1377 | WP_014636323.1 | DEAD/DEAH box helicase | - |
| NJAUSS_RS03350 () | 679273..679749 | + | 477 | WP_014636324.1 | hypothetical protein | - |
| NJAUSS_RS03355 () | 679944..680126 | + | 183 | WP_014636325.1 | hypothetical protein | - |
| NJAUSS_RS03360 () | 680171..681208 | + | 1038 | WP_014636326.1 | methionine adenosyltransferase | - |
| NJAUSS_RS03365 () | 681210..681575 | + | 366 | WP_014636327.1 | HNH endonuclease | - |
| NJAUSS_RS03370 () | 681874..682335 | + | 462 | WP_014636328.1 | hypothetical protein | - |
| NJAUSS_RS03375 () | 682307..683560 | + | 1254 | WP_014636329.1 | DNA modification methylase | - |
| NJAUSS_RS03380 () | 683560..684150 | + | 591 | WP_014636330.1 | HNH endonuclease | - |
| NJAUSS_RS03385 () | 684147..685421 | + | 1275 | WP_014636331.1 | DNA (cytosine-5-)-methyltransferase | - |
| NJAUSS_RS03390 () | 685500..685748 | + | 249 | WP_014636332.1 | hypothetical protein | - |
| NJAUSS_RS03395 () | 685750..685962 | + | 213 | WP_014636333.1 | DUF4314 domain-containing protein | - |
| NJAUSS_RS03405 () | 686246..686719 | + | 474 | WP_003058374.1 | phage terminase small subunit P27 family | - |
| NJAUSS_RS03410 () | 686716..688308 | + | 1593 | WP_015445169.1 | terminase large subunit | - |
| NJAUSS_RS03415 () | 688368..688670 | + | 303 | WP_014636336.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| NJAUSS_RS03420 () | 688670..689008 | + | 339 | WP_014636337.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NJAUSS_RS03425 () | 689145..689489 | + | 345 | WP_014636338.1 | hypothetical protein | - |
| NJAUSS_RS03430 () | 689547..690830 | + | 1284 | WP_014636339.1 | phage portal protein | - |
| NJAUSS_RS03435 () | 690823..691518 | + | 696 | WP_014636340.1 | Clp protease ClpP | - |
| NJAUSS_RS03440 () | 691537..692742 | + | 1206 | WP_014636341.1 | phage major capsid protein | - |
| NJAUSS_RS03445 () | 692745..693002 | + | 258 | WP_041179162.1 | head-tail connector protein | - |
| NJAUSS_RS03450 () | 693002..693340 | + | 339 | WP_014636343.1 | head-tail adaptor protein | - |
| NJAUSS_RS03455 () | 693333..693701 | + | 369 | WP_014636344.1 | hypothetical protein | - |
| NJAUSS_RS03460 () | 693708..694034 | + | 327 | WP_014636345.1 | hypothetical protein | - |
| NJAUSS_RS03465 () | 694036..694605 | + | 570 | WP_014636346.1 | hypothetical protein | - |
| NJAUSS_RS03470 () | 694616..695035 | + | 420 | WP_014636347.1 | hypothetical protein | - |
| NJAUSS_RS03480 () | 695218..698076 | + | 2859 | WP_015445172.1 | Tail tape measure protein gp18 | - |
| NJAUSS_RS03485 () | 698073..698795 | + | 723 | WP_014636349.1 | phage tail protein | - |
| NJAUSS_RS03490 () | 698797..703344 | + | 4548 | WP_014636350.1 | phage tail protein | - |
| NJAUSS_RS03495 () | 703357..703563 | + | 207 | WP_014636351.1 | hypothetical protein | - |
| NJAUSS_RS03500 () | 703569..703937 | + | 369 | WP_014636352.1 | hypothetical protein | - |
| NJAUSS_RS03505 () | 703915..704310 | + | 396 | WP_014636353.1 | phage holin family protein | - |
| NJAUSS_RS03510 () | 704317..705786 | + | 1470 | WP_014636354.1 | N-acetylmuramoyl-L-alanine amidase | - |
| NJAUSS_RS03515 () | 706008..707249 | + | 1242 | WP_014636355.1 | recombinase family protein | - |
| NJAUSS_RS03520 () | 707152..708504 | + | 1353 | WP_171935713.1 | recombinase family protein | - |
| NJAUSS_RS03525 () | 708586..710322 | + | 1737 | WP_014636357.1 | hypothetical protein | - |
| NJAUSS_RS03530 () | 710964..711623 | - | 660 | WP_042507186.1 | RibD family protein | - |
| NJAUSS_RS03535 () | 711734..712141 | - | 408 | WP_079253078.1 | WYL domain-containing protein | - |
| NJAUSS_RS03540 () | 712114..712686 | - | 573 | WP_001079938.1 | HTH domain-containing protein | - |
| NJAUSS_RS03545 () | 712962..713756 | - | 795 | WP_001096887.1 | aminoglycoside O-phosphotransferase APH(3')-IIIa | - |
| NJAUSS_RS03550 () | 713849..714391 | - | 543 | WP_000627290.1 | streptothricin N-acetyltransferase Sat4 | - |
| NJAUSS_RS03555 () | 714388..715296 | - | 909 | WP_001255866.1 | aminoglycoside nucleotidyltransferase ANT(6)-Ia | - |
| NJAUSS_RS10995 () | 715315..715455 | - | 141 | Protein_647 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| NJAUSS_RS03560 () | 715601..716338 | - | 738 | WP_002321849.1 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | - |
| NJAUSS_RS10665 () | 716884..717180 | - | 297 | Protein_649 | transposase family protein | - |
| NJAUSS_RS03565 () | 717406..718522 | + | 1117 | Protein_650 | UDP-galactopyranose mutase | - |
| NJAUSS_RS03570 () | 718622..719167 | - | 546 | WP_012775026.1 | NAD(P)H-dependent oxidoreductase | - |
| NJAUSS_RS03575 () | 719230..719679 | - | 450 | WP_009909619.1 | MarR family transcriptional regulator | - |
| NJAUSS_RS10670 () | 719973..720820 | + | 848 | WP_087892711.1 | IS630 family transposase | - |
| NJAUSS_RS03590 () | 720879..721376 | + | 498 | WP_011922751.1 | DUF5590 domain-containing protein | - |
| NJAUSS_RS03595 () | 721373..722554 | + | 1182 | WP_011922154.1 | pyridoxal phosphate-dependent aminotransferase | - |
| NJAUSS_RS03600 () | 722569..723915 | + | 1347 | WP_011922752.1 | asparagine--tRNA ligase | - |
| NJAUSS_RS03605 () | 724187..724414 | + | 228 | WP_002938604.1 | hypothetical protein | Antitoxin Detail |
| NJAUSS_RS03610 () | 724404..724673 | + | 270 | WP_011922754.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NJAUSS_RS03615 () | 725079..726398 | + | 1320 | WP_012775027.1 | MATE family efflux transporter | - |
| NJAUSS_RS03620 () | 726449..726826 | + | 378 | WP_002937263.1 | RidA family protein | - |
| NJAUSS_RS03625 () | 726848..727735 | + | 888 | WP_011922160.1 | RNase adapter RapZ | - |
| NJAUSS_RS03630 () | 727732..728706 | + | 975 | WP_002937257.1 | YvcK family protein | - |
| NJAUSS_RS03635 () | 728703..729620 | + | 918 | WP_002937252.1 | DNA-binding protein WhiA | - |
| NJAUSS_RS03640 () | 729906..730601 | + | 696 | WP_012775028.1 | Crp/Fnr family transcriptional regulator | - |
| NJAUSS_RS03645 () | 730859..732091 | + | 1233 | WP_024379073.1 | arginine deiminase | - |
| NJAUSS_RS03650 () | 732091..732531 | + | 441 | WP_011922163.1 | GNAT family N-acetyltransferase | - |
| NJAUSS_RS03655 () | 732550..733563 | + | 1014 | WP_011922164.1 | ornithine carbamoyltransferase | - |
| NJAUSS_RS03660 () | 733681..734628 | + | 948 | WP_002941719.1 | carbamate kinase | - |
| NJAUSS_RS03665 () | 734971..736473 | + | 1503 | WP_011922166.1 | YfcC family protein | - |
| NJAUSS_RS03670 () | 736592..737932 | + | 1341 | WP_042507187.1 | dipeptidase | - |
| NJAUSS_RS03675 () | 738303..742562 | + | 4260 | WP_011922168.1 | family 16 glycosylhydrolase | - |
| NJAUSS_RS03680 () | 742853..743326 | - | 474 | WP_002941715.1 | arginine repressor | - |
| NJAUSS_RS03685 () | 743375..744403 | - | 1029 | WP_012775031.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|