MGE detailed information
MGE type: Prophage MGE length: 27113 bp
Accession: NC_020163 Location: 232710..259822 Organism: Escherichia coli APEC O78 Replicon: chromosome
Accession: NC_020163 Location: 232710..259822 Organism: Escherichia coli APEC O78 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO78_RS01080 () | 228101..228598 | + | 498 | WP_001297295.1 | chorismate lyase | - |
| APECO78_RS01085 () | 228611..229483 | + | 873 | WP_000455228.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| APECO78_RS01090 () | 229638..232061 | - | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| APECO78_RS01095 () | 232232..232600 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| APECO78_RS01100 () | 232710..233318 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| APECO78_RS01105 () | 233391..234716 | + | 1326 | WP_001301116.1 | MATE family efflux transporter DinF | - |
| APECO78_RS01110 () | 234832..235041 | + | 210 | WP_001030593.1 | CsbD family protein | - |
| APECO78_RS01115 () | 235083..235598 | - | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| APECO78_RS01120 () | 235916..236932 | + | 1017 | WP_000912595.1 | DUF2713 family protein | - |
| APECO78_RS24285 () | 237295..237417 | + | 123 | WP_001300034.1 | hypothetical protein | - |
| APECO78_RS01125 () | 237704..238177 | + | 474 | WP_000287252.1 | SocA family protein | Antitoxin Detail |
| APECO78_RS01130 () | 238200..238748 | + | 549 | WP_000019186.1 | hypothetical protein | Toxin Detail |
| APECO78_RS01135 () | 238782..239051 | - | 270 | WP_001093912.1 | pyocin activator PrtN family protein | - |
| APECO78_RS01140 () | 239088..239840 | - | 753 | WP_001701368.1 | hypothetical protein | - |
| APECO78_RS01145 () | 240057..240881 | - | 825 | WP_015364383.1 | DUF2303 family protein | - |
| APECO78_RS01150 () | 240946..241308 | - | 363 | WP_000135682.1 | hypothetical protein | - |
| APECO78_RS01155 () | 241975..242649 | - | 675 | WP_000859462.1 | LexA family transcriptional repressor | - |
| APECO78_RS01160 () | 242740..242961 | + | 222 | WP_000649475.1 | helix-turn-helix domain-containing protein | - |
| APECO78_RS01165 () | 243065..243664 | + | 600 | WP_001230372.1 | Attachment invasion locus protein | VF |
| APECO78_RS01175 () | 243723..247070 | + | 3348 | WP_001701371.1 | prophage tail fiber N-terminal domain-containing protein | - |
| APECO78_RS01185 () | 247508..248877 | - | 1370 | Protein_206 | reverse transcriptase | - |
| APECO78_RS01190 () | 248855..249406 | - | 552 | WP_000543834.1 | SLATT domain-containing protein | - |
| APECO78_RS01205 () | 249719..250947 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| APECO78_RS01210 () | 250964..251212 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| APECO78_RS01215 () | 251273..252370 | - | 1098 | WP_000332259.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| APECO78_RS01220 () | 252459..253496 | + | 1038 | WP_000543841.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| APECO78_RS01225 () | 253630..253872 | + | 243 | WP_000891389.1 | envelope stress response protein PspG | - |
| APECO78_RS01230 () | 254038..255021 | - | 984 | WP_000235522.1 | Quinone oxidoreductase 1 | VF |
| APECO78_RS01235 () | 255104..256519 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| APECO78_RS01240 () | 256572..257651 | + | 1080 | WP_001147328.1 | alanine racemase | - |
| APECO78_RS01245 () | 257904..259097 | + | 1194 | WP_000486996.1 | aromatic amino acid transaminase | - |
| APECO78_RS26945 () | 259319..259822 | - | 504 | WP_001027717.1 | hypothetical protein | - |
| APECO78_RS01255 () | 260224..260937 | + | 714 | WP_001307512.1 | acid phosphatase AphA | - |
| APECO78_RS01260 () | 261048..261464 | + | 417 | WP_000270372.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| APECO78_RS01265 () | 261468..261824 | + | 357 | WP_000155657.1 | MmcQ/YjbR family DNA-binding protein | - |
| APECO78_RS01270 () | 261859..264681 | - | 2823 | WP_000357740.1 | excinuclease ABC subunit UvrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|