MGE detailed information
MGE type: IScluster/Tn MGE length: 20891 bp
Accession: NC_019906 Location: 1740..22630 Organism: Pseudomonas putida HB3267 Replicon: plasmid pPC9
Accession: NC_019906 Location: 1740..22630 Organism: Pseudomonas putida HB3267 Replicon: plasmid pPC9
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B479_RS26770 () | 115..1128 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| B479_RS29495 () | 1532..1600 | + | 69 | Protein_1 | EAL domain-containing protein | - |
| B479_RS26775 () | 1740..2504 | - | 765 | WP_043936525.1 | IS6 family transposase IS6100 | Transposase |
| B479_RS29500 () | 2622..2690 | - | 69 | Protein_3 | EAL domain-containing protein | - |
| B479_RS26780 () | 3011..3511 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| B479_RS26785 () | 3639..4475 | - | 837 | WP_024193717.1 | Dihydropteroate synthase | ARG |
| B479_RS26790 () | 4616..5629 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| B479_RS26795 () | 5930..6856 | + | 927 | WP_004574516.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| B479_RS28270 () | 6952..7152 | + | 201 | Protein_8 | relaxase | - |
| B479_RS26800 () | 7184..7834 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| B479_RS26805 () | 7940..9139 | + | 1200 | WP_001973670.1 | Tetracycline resistance protein, class C | ARG |
| B479_RS26810 () | 9171..10055 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| B479_RS26815 () | 10609..11460 | + | 852 | WP_000240536.1 | replication protein | - |
| B479_RS26820 () | 11768..12583 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| B479_RS28285 () | 12644..12949 | + | 306 | Protein_14 | hypothetical protein | - |
| B479_RS26825 () | 12954..13790 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| B479_RS26830 () | 13790..14593 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| B479_RS26835 () | 14659..14979 | - | 321 | Protein_17 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| B479_RS26840 () | 15033..15737 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| B479_RS28300 () | 15894..16709 | - | 816 | WP_000018326.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| B479_RS26845 () | 16860..17033 | + | 174 | Protein_20 | IS6 family transposase IS15 | Transposase |
| B479_RS26850 () | 17073..17414 | - | 342 | WP_025999701.1 | hypothetical protein | - |
| B479_RS26855 () | 17430..17756 | - | 327 | WP_000091614.1 | hypothetical protein | - |
| B479_RS26860 () | 17780..18115 | - | 336 | WP_000741275.1 | hypothetical protein | - |
| B479_RS26865 () | 18130..18465 | - | 336 | WP_001172026.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| B479_RS26870 () | 18446..18823 | - | 378 | WP_003151133.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B479_RS26875 () | 19015..19617 | + | 603 | WP_010465829.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| B479_RS26880 () | 19601..22630 | + | 3030 | WP_010799689.1 | Tn3 family transposase ISPsy42 | Transposase |
| B479_RS26885 () | 23474..23842 | + | 369 | WP_015272386.1 | hypothetical protein | - |
| B479_RS26890 () | 23875..24192 | + | 318 | WP_015272387.1 | hypothetical protein | - |
| B479_RS26895 () | 24196..25284 | + | 1089 | WP_015272388.1 | DNA cytosine methyltransferase | - |
| B479_RS26900 () | 25295..25555 | + | 261 | WP_015272389.1 | hypothetical protein | - |
| B479_RS29505 () | 25620..25685 | + | 66 | Protein_32 | EAL domain-containing protein | - |
| B479_RS26905 () | 25760..27439 | + | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|