MGE detailed information
MGE type: Genomic_island MGE length: 43400 bp
Accession: NC_019902 Location: 634414..677813 Organism: Thioalkalivibrio nitratireducens DSM 14787 Replicon: chromosome
Accession: NC_019902 Location: 634414..677813 Organism: Thioalkalivibrio nitratireducens DSM 14787 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TVNIR_RS20125 () | 629750..629995 | + | 246 | WP_015257530.1 | hypothetical protein | - |
| TVNIR_RS03190 () | 630876..631214 | + | 339 | WP_083499330.1 | MarR family EPS-associated transcriptional regulator | - |
| TVNIR_RS03195 () | 631589..633097 | + | 1509 | WP_015257532.1 | nucleotide sugar dehydrogenase | - |
| TVNIR_RS03200 () | 633291..634340 | + | 1050 | WP_015257534.1 | Gfo/Idh/MocA family oxidoreductase | - |
| TVNIR_RS03205 () | 634408..634788 | + | 381 | WP_043740096.1 | GxxExxY protein | - |
| TVNIR_RS03210 () | 634825..635418 | + | 594 | WP_015257536.1 | UDP-2-acetamido-3-amino-2, 3-dideoxy-D-glucuronate N-acetyltransferase | VF |
| TVNIR_RS03215 () | 635408..635716 | + | 309 | WP_015257537.1 | hypothetical protein | - |
| TVNIR_RS03220 () | 636181..637374 | + | 1194 | WP_211263173.1 | UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase | VF |
| TVNIR_RS03225 () | 637496..638962 | + | 1467 | WP_015257539.1 | oligosaccharide flippase family protein | - |
| TVNIR_RS03230 () | 639143..639550 | + | 408 | WP_015257540.1 | ISL3 family transposase ISDvu5 | Transposase |
| TVNIR_RS18600 () | 639894..640604 | + | 711 | Protein_654 | reverse transcriptase N-terminal domain-containing protein | - |
| TVNIR_RS03235 () | 640618..641571 | + | 954 | Protein_655 | IS1595 family transposase ISTni3 | Transposase |
| TVNIR_RS03240 () | 641823..643148 | + | 1326 | WP_015257541.1 | IS110 family transposase ISCARN20 | Transposase |
| TVNIR_RS19560 () | 643313..644638 | + | 1326 | WP_157092172.1 | hypothetical protein | - |
| TVNIR_RS03245 () | 644747..646702 | - | 1956 | WP_015257543.1 | hypothetical protein | - |
| TVNIR_RS03250 () | 646822..647922 | + | 1101 | WP_015257544.1 | UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase | VF |
| TVNIR_RS03255 () | 647927..649084 | + | 1158 | WP_015257545.1 | glycosyltransferase | - |
| TVNIR_RS03260 () | 649242..650468 | + | 1227 | WP_157092173.1 | glycosyltransferase family 4 protein | - |
| TVNIR_RS03265 () | 650530..651450 | + | 921 | WP_052316601.1 | sulfotransferase | - |
| TVNIR_RS03270 () | 651532..652722 | + | 1191 | WP_083499331.1 | GDP-perosamine synthase | VF |
| TVNIR_RS03275 () | 652850..653434 | + | 585 | WP_015257549.1 | haloacid dehalogenase-like hydrolase | - |
| TVNIR_RS03280 () | 653742..654092 | + | 351 | WP_043739202.1 | type II toxin-antitoxin system MqsR family toxin | - |
| TVNIR_RS03285 () | 654092..654661 | + | 570 | WP_043739204.1 | type II toxin-antitoxin system MqsA family antitoxin | - |
| TVNIR_RS19975 () | 654658..655122 | + | 465 | WP_169794285.1 | protein-export chaperone SecB | - |
| TVNIR_RS18615 () | 655455..655574 | + | 120 | WP_157092328.1 | phosphoglycolate phosphatase | - |
| TVNIR_RS03295 () | 655579..656352 | + | 774 | WP_015257554.1 | hypothetical protein | VF |
| TVNIR_RS03300 () | 656578..657933 | + | 1356 | WP_015257555.1 | plasmid recombination protein | - |
| TVNIR_RS18620 () | 657983..658273 | + | 291 | Protein_671 | YdcF family protein | - |
| TVNIR_RS03305 () | 658389..658598 | + | 210 | WP_015257556.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| TVNIR_RS03310 () | 658644..658829 | + | 186 | WP_211263174.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| TVNIR_RS03315 () | 658854..659177 | + | 324 | WP_157092175.1 | hypothetical protein | VF |
| TVNIR_RS03320 () | 659524..659868 | + | 345 | WP_043739212.1 | nucleotidyltransferase domain-containing protein | - |
| TVNIR_RS03325 () | 659865..660254 | + | 390 | WP_015257560.1 | HEPN domain-containing protein | - |
| TVNIR_RS03330 () | 660551..660787 | + | 237 | WP_015257561.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| TVNIR_RS03335 () | 660787..661221 | + | 435 | WP_015257562.1 | type II toxin-antitoxin system VapC family toxin | - |
| TVNIR_RS03340 () | 661237..661668 | - | 432 | WP_015257563.1 | PIN domain-containing protein | - |
| TVNIR_RS03345 () | 661655..661885 | - | 231 | WP_015257564.1 | ribbon-helix-helix protein, CopG family | - |
| TVNIR_RS03350 () | 662024..662335 | + | 312 | WP_015257565.1 | YdcF family protein | - |
| TVNIR_RS03355 () | 662395..662733 | + | 339 | WP_015257566.1 | helix-turn-helix domain-containing protein | - |
| TVNIR_RS03360 () | 662723..664039 | + | 1317 | WP_015257567.1 | type II toxin-antitoxin system HipA family toxin | - |
| TVNIR_RS03365 () | 664163..664348 | + | 186 | WP_015257568.1 | hypothetical protein | - |
| TVNIR_RS03370 () | 664588..665745 | + | 1158 | WP_015257569.1 | ATP-binding protein | - |
| TVNIR_RS18625 () | 665818..665994 | - | 177 | Protein_686 | transposase | - |
| TVNIR_RS19565 () | 666165..666344 | + | 180 | WP_043739218.1 | hypothetical protein | - |
| TVNIR_RS03380 () | 666797..667147 | + | 351 | WP_006749173.1 | type II toxin-antitoxin system MqsR family toxin | - |
| TVNIR_RS03385 () | 667147..667716 | + | 570 | WP_015257571.1 | type II toxin-antitoxin system MqsA family antitoxin | - |
| TVNIR_RS19570 () | 667713..668177 | + | 465 | WP_157092176.1 | protein-export chaperone SecB | - |
| TVNIR_RS03395 () | 668626..669399 | + | 774 | WP_015257575.1 | hypothetical protein | VF |
| TVNIR_RS03400 () | 669619..670332 | + | 714 | WP_015257576.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| TVNIR_RS03405 () | 670325..671221 | + | 897 | WP_015257577.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| TVNIR_RS03410 () | 671378..671800 | + | 423 | WP_015257578.1 | hypothetical protein | VF |
| TVNIR_RS03415 () | 672058..672480 | - | 423 | WP_043739222.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| TVNIR_RS03420 () | 672464..672721 | - | 258 | WP_015257580.1 | hypothetical protein | - |
| TVNIR_RS18645 () | 673016..673423 | + | 408 | Protein_697 | YdcF family protein | - |
| TVNIR_RS03435 () | 673483..673821 | + | 339 | WP_015257583.1 | helix-turn-helix domain-containing protein | - |
| TVNIR_RS03440 () | 673811..675127 | + | 1317 | WP_015257584.1 | type II toxin-antitoxin system HipA family toxin | - |
| TVNIR_RS03445 () | 675100..675432 | + | 333 | WP_015257585.1 | hypothetical protein | VF |
| TVNIR_RS03450 () | 675545..676762 | + | 1218 | WP_043739223.1 | hypothetical protein | - |
| TVNIR_RS03455 () | 677071..677319 | + | 249 | WP_052316606.1 | UPF0175 family protein | - |
| TVNIR_RS18650 () | 677319..677813 | + | 495 | WP_083499332.1 | DUF3368 domain-containing protein | - |
| TVNIR_RS03460 () | 678266..679032 | + | 767 | Protein_704 | YdcF family protein | - |
| TVNIR_RS03465 () | 679278..680444 | + | 1167 | WP_043739225.1 | helix-turn-helix domain-containing protein | - |
| TVNIR_RS03470 () | 680505..680951 | + | 447 | WP_052316607.1 | hypothetical protein | - |
| TVNIR_RS03475 () | 681221..681472 | + | 252 | WP_015257592.1 | plasmid stabilization protein | - |
| TVNIR_RS03480 () | 681469..681657 | + | 189 | WP_043739230.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| TVNIR_RS03485 () | 681711..681959 | + | 249 | WP_043739232.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| TVNIR_RS03490 () | 681956..682357 | + | 402 | WP_015257595.1 | type II toxin-antitoxin system VapC family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|