MGE detailed information
MGE type: Genomic_island MGE length: 27551 bp
Accession: NC_019902 Location: 3395529..3423079 Organism: Thioalkalivibrio nitratireducens DSM 14787 Replicon: chromosome
Accession: NC_019902 Location: 3395529..3423079 Organism: Thioalkalivibrio nitratireducens DSM 14787 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TVNIR_RS15495 () | 3390862..3391491 | - | 630 | WP_015260017.1 | hypothetical protein | - |
| TVNIR_RS15500 () | 3391716..3392006 | + | 291 | WP_006745909.1 | hypothetical protein | - |
| TVNIR_RS15505 () | 3392003..3392302 | + | 300 | WP_015260018.1 | hypothetical protein | - |
| TVNIR_RS20060 () | 3392571..3393131 | + | 561 | WP_043738964.1 | hypothetical protein | - |
| TVNIR_RS15515 () | 3393229..3394668 | + | 1440 | WP_015256992.1 | IS481-like element ISTni2 family transposase | - |
| TVNIR_RS15520 () | 3394665..3395510 | + | 846 | WP_015256993.1 | ATP-binding protein | - |
| TVNIR_RS15525 () | 3395529..3395756 | + | 228 | WP_015256994.1 | rhomboid family protein | - |
| TVNIR_RS15530 () | 3395880..3396236 | - | 357 | Protein_3119 | transposase | - |
| TVNIR_RS19315 () | 3396367..3396593 | + | 227 | Protein_3120 | DUF433 domain-containing protein | - |
| TVNIR_RS15535 () | 3396590..3397033 | + | 444 | WP_157092291.1 | nucleotidyltransferase domain-containing protein | - |
| TVNIR_RS15540 () | 3397168..3401256 | + | 4089 | WP_015260021.1 | DUF3427 domain-containing protein | - |
| TVNIR_RS15545 () | 3401258..3401695 | + | 438 | WP_015260022.1 | (deoxy)nucleoside triphosphate pyrophosphohydrolase | - |
| TVNIR_RS15550 () | 3401798..3403567 | + | 1770 | WP_015260023.1 | NERD domain-containing protein | - |
| TVNIR_RS15555 () | 3403658..3404452 | - | 795 | WP_211263207.1 | NERD domain-containing protein | - |
| TVNIR_RS19870 () | 3404504..3404842 | - | 339 | WP_157092293.1 | hypothetical protein | - |
| TVNIR_RS15565 () | 3405118..3406179 | + | 1062 | WP_043739825.1 | hypothetical protein | - |
| TVNIR_RS15570 () | 3406346..3409645 | + | 3300 | WP_015260027.1 | site-specific DNA-methyltransferase | - |
| TVNIR_RS15575 () | 3409642..3410808 | + | 1167 | WP_015260028.1 | ATP-binding protein | - |
| TVNIR_RS15580 () | 3410808..3411287 | + | 480 | WP_015260029.1 | hypothetical protein | - |
| TVNIR_RS15585 () | 3411284..3414106 | + | 2823 | WP_015260030.1 | DEAD/DEAH box helicase family protein | - |
| TVNIR_RS15595 () | 3414720..3415937 | + | 1218 | WP_211263120.1 | ImmA/IrrE family metallo-endopeptidase | - |
| TVNIR_RS15600 () | 3415940..3417079 | + | 1140 | WP_043739826.1 | beta family protein | - |
| TVNIR_RS19320 () | 3416998..3417888 | - | 891 | WP_083499483.1 | PIN domain-containing protein | - |
| TVNIR_RS15605 () | 3417892..3418362 | - | 471 | WP_015260033.1 | helix-turn-helix domain-containing protein | - |
| TVNIR_RS15610 () | 3418548..3419014 | - | 467 | Protein_3136 | DUF5131 family protein | - |
| TVNIR_RS15615 () | 3419127..3419417 | - | 291 | WP_015260036.1 | nucleotidyltransferase | - |
| TVNIR_RS15620 () | 3419651..3420046 | - | 396 | WP_015260038.1 | hypothetical protein | - |
| TVNIR_RS15625 () | 3420121..3420426 | - | 306 | WP_015260039.1 | nucleotidyltransferase domain-containing protein | - |
| TVNIR_RS15630 () | 3420612..3420809 | - | 198 | WP_015260040.1 | DUF2283 domain-containing protein | - |
| TVNIR_RS15635 () | 3421447..3421782 | + | 336 | WP_043739827.1 | helix-turn-helix transcriptional regulator | - |
| TVNIR_RS15640 () | 3421775..3422020 | + | 246 | WP_015260042.1 | HipA N-terminal domain-containing protein | - |
| TVNIR_RS15645 () | 3422017..3422289 | - | 273 | WP_015260043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| TVNIR_RS15650 () | 3422273..3422485 | - | 213 | WP_043739829.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| TVNIR_RS15655 () | 3422753..3423079 | - | 327 | WP_043739830.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| TVNIR_RS15660 () | 3423088..3423351 | - | 264 | WP_015260046.1 | ribbon-helix-helix domain-containing protein | - |
| TVNIR_RS15665 () | 3423594..3423791 | - | 198 | WP_015260047.1 | DUF2283 domain-containing protein | - |
| TVNIR_RS15670 () | 3423909..3424517 | - | 609 | WP_015260048.1 | plasmid pRiA4b ORF-3 family protein | - |
| TVNIR_RS15675 () | 3424633..3424842 | - | 210 | WP_052316649.1 | nucleotidyltransferase family protein | - |
| TVNIR_RS15685 () | 3425264..3425497 | + | 234 | Protein_3150 | cupin domain-containing protein | - |
| TVNIR_RS15690 () | 3425601..3426165 | - | 565 | Protein_3151 | PIN domain-containing protein | - |
| TVNIR_RS15695 () | 3426165..3426617 | - | 453 | WP_043739833.1 | helix-turn-helix domain-containing protein | - |
| TVNIR_RS15700 () | 3426842..3427267 | - | 426 | WP_015260052.1 | YchJ family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|