MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 120566 bp
Accession: NC_018594 Location: 1328588..1449153 Organism: Streptococcus pneumoniae SPNA45 Replicon: chromosome
Accession: NC_018594 Location: 1328588..1449153 Organism: Streptococcus pneumoniae SPNA45 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPNA45_RS07415 () | 1323805..1324644 | + | 840 | WP_000761908.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| SPNA45_RS07420 () | 1324631..1325230 | + | 600 | WP_001837640.1 | threonylcarbamoyl-AMP synthase | - |
| SPNA45_RS07425 () | 1325232..1325663 | + | 432 | WP_000942945.1 | GNAT family N-acetyltransferase | - |
| SPNA45_RS07430 () | 1325725..1326981 | + | 1257 | WP_000575479.1 | serine hydroxymethyltransferase | - |
| SPNA45_RS07435 () | 1326989..1327963 | + | 975 | WP_000356094.1 | nucleoid-associated protein | - |
| SPNA45_RS07440 () | 1327963..1328577 | + | 615 | WP_000476376.1 | cell wall hydrolase Pmp23 | - |
| SPNA45_RS07445 () | 1328651..1329625 | + | 975 | WP_001227742.1 | DUF1002 domain-containing protein | - |
| SPNA45_RS07450 () | 1329699..1331330 | + | 1632 | WP_000914567.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| SPNA45_RS07455 () | 1331544..1331777 | + | 234 | WP_000710809.1 | hypothetical protein | - |
| SPNA45_RS07460 () | 1332067..1332285 | + | 219 | WP_001207344.1 | helix-turn-helix transcriptional regulator | - |
| SPNA45_RS07465 () | 1332289..1332558 | + | 270 | WP_000175448.1 | hypothetical protein | - |
| SPNA45_RS07470 () | 1332679..1333704 | + | 1026 | WP_000790744.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| SPNA45_RS07475 () | 1333694..1334701 | + | 1008 | WP_001244693.1 | Ferric enterobactin transport system permease protein FepD | VF |
| SPNA45_RS07480 () | 1334701..1335708 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| SPNA45_RS07485 () | 1335708..1336502 | + | 795 | WP_000677520.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| SPNA45_RS12470 () | 1336890..1337315 | + | 426 | WP_074192621.1 | restriction endonuclease subunit S | - |
| SPNA45_RS07495 () | 1337371..1337688 | + | 318 | WP_000968321.1 | DUF3847 domain-containing protein | - |
| SPNA45_RS12475 () | 1337998..1339588 | + | 1591 | Protein_1382 | MobA/MobL family protein | - |
| SPNA45_RS13715 () | 1339662..1339835 | + | 174 | WP_001042635.1 | hypothetical protein | - |
| SPNA45_RS07515 () | 1340021..1340455 | + | 435 | WP_000606579.1 | PcfB family protein | - |
| SPNA45_RS07520 () | 1340582..1341328 | + | 747 | WP_000224687.1 | phage replisome organizer N-terminal domain-containing protein | - |
| SPNA45_RS13720 () | 1342012..1342173 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| SPNA45_RS07530 () | 1342265..1343944 | + | 1680 | WP_000031856.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| SPNA45_RS07535 () | 1344212..1344778 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| SPNA45_RS07540 () | 1345100..1345288 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| SPNA45_RS07545 () | 1345350..1346108 | + | 759 | WP_000262024.1 | ATP-grasp domain-containing protein | - |
| SPNA45_RS07550 () | 1346166..1347020 | + | 855 | WP_000900015.1 | ADP-ribosylglycohydrolase family protein | - |
| SPNA45_RS07555 () | 1347132..1348016 | + | 885 | WP_000710113.1 | diacylglycerol kinase family lipid kinase | - |
| SPNA45_RS07560 () | 1348179..1349918 | + | 1740 | WP_000423469.1 | glycoside hydrolase family 13 protein | - |
| SPNA45_RS07570 () | 1350193..1350648 | + | 456 | WP_000500473.1 | hypothetical protein | - |
| SPNA45_RS07575 () | 1351093..1351569 | + | 477 | WP_000579614.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SPNA45_RS07580 () | 1351569..1352330 | + | 762 | WP_000405627.1 | zeta toxin family protein | Toxin Detail |
| SPNA45_RS12480 () | 1352358..1353134 | + | 777 | Protein_1397 | hypothetical protein | - |
| SPNA45_RS07595 () | 1353062..1353514 | + | 453 | WP_078169748.1 | hypothetical protein | - |
| SPNA45_RS07600 () | 1354333..1354692 | + | 360 | WP_000003750.1 | hypothetical protein | - |
| SPNA45_RS07605 () | 1354702..1355055 | + | 354 | WP_000263056.1 | MobC family plasmid mobilization relaxosome protein | - |
| SPNA45_RS13845 () | 1355042..1356908 | + | 1867 | Protein_1401 | relaxase/mobilization nuclease domain-containing protein | - |
| SPNA45_RS07625 () | 1356953..1357807 | - | 855 | WP_000837491.1 | XRE/MutR family transcriptional regulator | - |
| SPNA45_RS13180 () | 1357887..1357949 | + | 63 | WP_133457516.1 | SHP2/SHP3 family peptide pheromone | - |
| SPNA45_RS07630 () | 1358030..1358578 | + | 549 | WP_000059558.1 | hypothetical protein | VF |
| SPNA45_RS12490 () | 1358571..1360694 | + | 2124 | WP_000197312.1 | Lactococcin-G-processing and transport ATP-binding protein LagD | VF |
| SPNA45_RS13725 () | 1360707..1360877 | + | 171 | WP_000711939.1 | hypothetical protein | - |
| SPNA45_RS07645 () | 1360911..1361639 | + | 729 | WP_001018880.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| SPNA45_RS07650 () | 1361632..1362315 | + | 684 | WP_000593058.1 | hypothetical protein | - |
| SPNA45_RS07655 () | 1362783..1363004 | + | 222 | WP_000285460.1 | helix-turn-helix domain-containing protein | - |
| SPNA45_RS12500 () | 1363521..1363774 | + | 254 | Protein_1410 | transposase family protein | - |
| SPNA45_RS07660 () | 1363902..1365131 | + | 1230 | WP_000703352.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| SPNA45_RS07665 () | 1365151..1367847 | + | 2697 | WP_000058201.1 | phosphoenolpyruvate carboxylase | - |
| SPNA45_RS07670 () | 1368260..1369264 | + | 1005 | WP_000792163.1 | hypothetical protein | VF |
| SPNA45_RS07675 () | 1369333..1370199 | + | 867 | WP_000637238.1 | ABC transporter permease | - |
| SPNA45_RS07680 () | 1370196..1370954 | + | 759 | WP_000125400.1 | ABC transporter ATP-binding protein | - |
| SPNA45_RS07685 () | 1371044..1372804 | + | 1761 | WP_000227898.1 | DNA primase | - |
| SPNA45_RS07690 () | 1372807..1373916 | + | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
| SPNA45_RS07695 () | 1373930..1374259 | + | 330 | WP_000222535.1 | metal-sulfur cluster assembly factor | - |
| SPNA45_RS07700 () | 1374374..1375417 | + | 1044 | WP_000412279.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
| SPNA45_RS07705 () | 1375433..1376758 | + | 1326 | WP_001219426.1 | glycosyltransferase family 4 protein | - |
| SPNA45_RS07710 () | 1376789..1376965 | + | 177 | WP_001256250.1 | PspC domain-containing protein | - |
| SPNA45_RS07715 () | 1377024..1377158 | + | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
| SPNA45_RS07720 () | 1377222..1378532 | + | 1311 | WP_000061641.1 | GTPase ObgE | - |
| SPNA45_RS13730 () | 1378542..1378700 | + | 159 | WP_001808548.1 | hypothetical protein | - |
| SPNA45_RS07730 () | 1379750..1381009 | + | 1260 | WP_001227082.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SPNA45_RS07735 () | 1381025..1381576 | + | 552 | WP_001028733.1 | GNAT family N-acetyltransferase | - |
| SPNA45_RS07740 () | 1381569..1382846 | + | 1278 | WP_000033828.1 | CBS-HotDog domain-containing transcription factor SpxR | - |
| SPNA45_RS07745 () | 1382862..1383722 | + | 861 | WP_000631540.1 | methionyl aminopeptidase | - |
| SPNA45_RS13185 () | 1383945..1384055 | + | 111 | Protein_1429 | IS5 family transposase ISSpn7 | Transposase |
| SPNA45_RS12510 () | 1384101..1384906 | + | 806 | Protein_1430 | IS5 family transposase | - |
| SPNA45_RS07760 () | 1385098..1387389 | + | 2292 | WP_000992849.1 | DNA helicase PcrA | - |
| SPNA45_RS07765 () | 1387432..1388112 | + | 681 | WP_000286922.1 | DNA repair protein RadC | - |
| SPNA45_RS07770 () | 1388109..1388798 | - | 690 | WP_000743330.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| SPNA45_RS07775 () | 1388816..1389457 | - | 642 | WP_000653403.1 | redox-sensing transcriptional repressor Rex | - |
| SPNA45_RS07780 () | 1389540..1389755 | - | 216 | WP_000462488.1 | DUF4649 family protein | - |
| SPNA45_RS07785 () | 1389763..1390110 | - | 348 | WP_000863509.1 | DUF1831 domain-containing protein | - |
| SPNA45_RS07790 () | 1390115..1391230 | - | 1116 | WP_000639658.1 | cysteine desulfurase | - |
| SPNA45_RS07795 () | 1391240..1392199 | - | 960 | WP_001283813.1 | ribose-phosphate diphosphokinase | - |
| SPNA45_RS07800 () | 1392312..1392881 | - | 570 | WP_000681287.1 | CYTH domain-containing protein | - |
| SPNA45_RS07805 () | 1393010..1393681 | + | 672 | WP_000171676.1 | GTP pyrophosphokinase family protein | - |
| SPNA45_RS07810 () | 1393665..1394483 | + | 819 | WP_000799053.1 | NAD kinase | - |
| SPNA45_RS07815 () | 1394480..1395376 | + | 897 | WP_001210014.1 | RluA family pseudouridine synthase | - |
| SPNA45_RS07820 () | 1395420..1396394 | + | 975 | WP_000451584.1 | phosphate acetyltransferase | - |
| SPNA45_RS12515 () | 1396656..1397982 | - | 1327 | Protein_1444 | transposase | - |
| SPNA45_RS07840 () | 1398164..1398463 | - | 300 | WP_000981526.1 | YbaB/EbfC family nucleoid-associated protein | - |
| SPNA45_RS07845 () | 1398933..1399532 | + | 600 | WP_001858962.1 | DUF1275 domain-containing protein | - |
| SPNA45_RS07850 () | 1399750..1400064 | + | 315 | WP_000109138.1 | 50S ribosomal protein L21 | - |
| SPNA45_RS07855 () | 1400080..1400424 | + | 345 | WP_000613700.1 | ribosomal-processing cysteine protease Prp | - |
| SPNA45_RS07860 () | 1400441..1400734 | + | 294 | WP_000916509.1 | 50S ribosomal protein L27 | - |
| SPNA45_RS13190 () | 1400939..1401144 | - | 206 | Protein_1450 | DUF1980 domain-containing protein | - |
| SPNA45_RS07870 () | 1401582..1402499 | + | 918 | WP_000587432.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| SPNA45_RS07875 () | 1402592..1403440 | - | 849 | WP_000592059.1 | YitT family protein | - |
| SPNA45_RS07880 () | 1403582..1404421 | + | 840 | WP_000161400.1 | DegV family protein | - |
| SPNA45_RS07885 () | 1404527..1404802 | + | 276 | WP_001284638.1 | HU family DNA-binding protein | - |
| SPNA45_RS07890 () | 1405228..1407129 | + | 1902 | WP_000584882.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| SPNA45_RS07895 () | 1407132..1407995 | + | 864 | WP_014931942.1 | XRE/MutR family transcriptional regulator | - |
| SPNA45_RS07900 () | 1408075..1409253 | + | 1179 | WP_001083015.1 | MFS transporter | - |
| SPNA45_RS07905 () | 1409346..1411304 | + | 1959 | WP_001042597.1 | NAD-dependent DNA ligase LigA | - |
| SPNA45_RS07910 () | 1411416..1413695 | + | 2280 | WP_000283046.1 | type I pullulanase | - |
| SPNA45_RS07920 () | 1414240..1415664 | + | 1425 | WP_000199374.1 | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | - |
| SPNA45_RS07925 () | 1416144..1418072 | + | 1929 | WP_000370240.1 | 1,4-alpha-glucan branching protein GlgB | - |
| SPNA45_RS07930 () | 1418062..1419204 | + | 1143 | WP_000787280.1 | glucose-1-phosphate adenylyltransferase | - |
| SPNA45_RS07935 () | 1419194..1420333 | + | 1140 | WP_000687070.1 | glucose-1-phosphate adenylyltransferase subunit GlgD | - |
| SPNA45_RS07940 () | 1420330..1421763 | + | 1434 | WP_000697298.1 | glycogen synthase GlgA | - |
| SPNA45_RS13605 () | 1421822..1422193 | + | 372 | WP_001809343.1 | Phosphoserine phosphatase | VF |
| SPNA45_RS13610 () | 1422138..1422467 | + | 330 | WP_001809344.1 | HAD hydrolase family protein | - |
| SPNA45_RS07955 () | 1422476..1423591 | + | 1116 | WP_000706417.1 | glycerate kinase | - |
| SPNA45_RS07960 () | 1423588..1424034 | - | 447 | WP_000131076.1 | YueI family protein | - |
| SPNA45_RS07965 () | 1424198..1425502 | + | 1305 | WP_000022813.1 | phosphopyruvate hydratase | - |
| SPNA45_RS12525 () | 1425640..1426068 | - | 429 | WP_074192826.1 | tyrosine-type recombinase/integrase | - |
| SPNA45_RS12530 () | 1425986..1426831 | - | 846 | Protein_1471 | IS630 family transposase | - |
| SPNA45_RS13205 () | 1427002..1427157 | + | 156 | Protein_1472 | diacylglycerol kinase family lipid kinase | - |
| SPNA45_RS07980 () | 1427357..1430632 | + | 3276 | WP_000772342.1 | ATP-dependent nuclease subunit B | - |
| SPNA45_RS07985 () | 1430629..1434279 | + | 3651 | WP_000767243.1 | helicase-exonuclease AddAB subunit AddA | - |
| SPNA45_RS07990 () | 1434449..1435627 | + | 1179 | WP_000174768.1 | hypothetical protein | - |
| SPNA45_RS07995 () | 1435836..1439737 | + | 3902 | Protein_1476 | Immunoglobulin A1 protease | VF |
| SPNA45_RS12535 () | 1439789..1439965 | + | 177 | WP_078063946.1 | LPXTG cell wall anchor domain-containing protein | - |
| SPNA45_RS08000 () | 1440184..1441035 | + | 852 | WP_000201299.1 | Ribosome biogenesis GTPase A | VF |
| SPNA45_RS08005 () | 1441022..1441801 | + | 780 | WP_000201141.1 | ribonuclease HII | - |
| SPNA45_RS08010 () | 1441817..1443367 | + | 1551 | WP_000392542.1 | ClC family H(+)/Cl(-) exchange transporter | - |
| SPNA45_RS08015 () | 1443927..1444997 | + | 1071 | WP_000817879.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| SPNA45_RS08020 () | 1445070..1446059 | - | 990 | WP_000873989.1 | Lipoate-protein ligase LplJ | VF |
| SPNA45_RS08025 () | 1446123..1447808 | - | 1686 | WP_014931946.1 | dihydrolipoyl dehydrogenase | - |
| SPNA45_RS08030 () | 1447872..1448915 | - | 1044 | WP_000752725.1 | dihydrolipoamide acetyltransferase | - |
| SPNA45_RS08035 () | 1449133..1450125 | - | 993 | WP_000448725.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| SPNA45_RS08040 () | 1450141..1451109 | - | 969 | WP_000105360.1 | thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha | - |
| SPNA45_RS08045 () | 1451263..1452624 | - | 1362 | WP_000278536.1 | sodium-coupled multidrug efflux MATE transporter PdrM | - |
| SPNA45_RS08050 () | 1452635..1452895 | - | 261 | WP_001105923.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|