MGE detailed information
MGE type: Prophage MGE length: 67053 bp
Accession: NC_018529 Location: 515454..582506 Organism: Burkholderia pseudomallei BPC006 Replicon: chromosome
Accession: NC_018529 Location: 515454..582506 Organism: Burkholderia pseudomallei BPC006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BPC006_RS19925 () | 510970..511578 | - | 609 | WP_004202253.1 | TIGR00645 family protein | - |
| BPC006_RS19930 () | 511811..512710 | - | 900 | WP_004525413.1 | DMT family transporter | - |
| BPC006_RS19935 () | 513000..514982 | + | 1983 | WP_004188376.1 | acetate--CoA ligase | - |
| BPC006_RS19940 () | 515140..515460 | + | 321 | WP_004196029.1 | DUF4212 domain-containing protein | - |
| BPC006_RS19945 () | 515454..517469 | + | 2016 | WP_004535221.1 | cation acetate symporter | - |
| BPC006_RS19955 () | 517696..518961 | - | 1266 | WP_051017848.1 | Putative defective protein IntQ ; Integrase | Integrase |
| BPC006_RS39890 () | 519113..519379 | - | 267 | WP_187293713.1 | hypothetical protein | - |
| BPC006_RS19960 () | 519467..519670 | - | 204 | WP_014919763.1 | hypothetical protein | - |
| BPC006_RS39070 () | 519654..520451 | - | 798 | WP_148281732.1 | hypothetical protein | - |
| BPC006_RS19965 () | 520460..520726 | - | 267 | WP_014919764.1 | hypothetical protein | - |
| BPC006_RS19970 () | 520710..521117 | - | 408 | WP_014919765.1 | hypothetical protein | - |
| BPC006_RS19975 () | 521131..522411 | - | 1281 | WP_148281733.1 | DUF2325 domain-containing protein | - |
| BPC006_RS19980 () | 522459..523097 | - | 639 | WP_041279424.1 | hypothetical protein | - |
| BPC006_RS19985 () | 523104..523337 | - | 234 | WP_014919768.1 | hypothetical protein | - |
| BPC006_RS19990 () | 523351..523566 | - | 216 | WP_014919769.1 | hypothetical protein | - |
| BPC006_RS19995 () | 523649..524155 | - | 507 | WP_014919770.1 | hypothetical protein | - |
| BPC006_RS20000 () | 524182..525333 | - | 1152 | WP_014919771.1 | hypothetical protein | - |
| BPC006_RS20005 () | 525330..526226 | - | 897 | WP_014919772.1 | YqaJ viral recombinase family protein | - |
| BPC006_RS20010 () | 526525..526812 | + | 288 | WP_148281734.1 | hypothetical protein | - |
| BPC006_RS39075 () | 526824..528224 | + | 1401 | WP_148281735.1 | hypothetical protein | - |
| BPC006_RS20020 () | 528214..528804 | + | 591 | WP_148281736.1 | hypothetical protein | - |
| BPC006_RS20025 () | 528801..529118 | + | 318 | WP_014919777.1 | hypothetical protein | - |
| BPC006_RS20030 () | 529021..529635 | + | 615 | WP_080017424.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BPC006_RS20035 () | 529632..530276 | + | 645 | WP_122835239.1 | hypothetical protein | - |
| BPC006_RS20040 () | 530273..530647 | + | 375 | WP_014919780.1 | hypothetical protein | - |
| BPC006_RS20045 () | 530644..530889 | + | 246 | WP_014919781.1 | hypothetical protein | - |
| BPC006_RS35150 () | 530898..531134 | + | 237 | WP_014919782.1 | DUF551 domain-containing protein | - |
| BPC006_RS20050 () | 531131..531364 | - | 234 | WP_014919783.1 | hypothetical protein | - |
| BPC006_RS35155 () | 531365..531601 | - | 237 | WP_014919784.1 | hypothetical protein | - |
| BPC006_RS35160 () | 531602..531823 | - | 222 | WP_014919785.1 | H-NS histone family protein | - |
| BPC006_RS20060 () | 531837..532106 | - | 270 | WP_041279428.1 | hypothetical protein | - |
| BPC006_RS20065 () | 532091..532312 | - | 222 | WP_148281737.1 | hypothetical protein | - |
| BPC006_RS20070 () | 532324..532839 | - | 516 | WP_014919788.1 | hypothetical protein | - |
| BPC006_RS20080 () | 533209..533556 | - | 348 | WP_014919790.1 | hypothetical protein | - |
| BPC006_RS30770 () | 533553..534209 | - | 657 | WP_014919791.1 | YkgJ family cysteine cluster protein | - |
| BPC006_RS20090 () | 534387..534617 | + | 231 | WP_041279434.1 | hypothetical protein | - |
| BPC006_RS20095 () | 534630..534821 | + | 192 | WP_014919793.1 | hypothetical protein | - |
| BPC006_RS20100 () | 534825..535244 | + | 420 | WP_051017851.1 | HNH endonuclease | - |
| BPC006_RS20105 () | 535463..536746 | + | 1284 | WP_014919795.1 | site-specific DNA-methyltransferase | - |
| BPC006_RS20110 () | 536746..537210 | + | 465 | WP_014919796.1 | phage terminase small subunit P27 family | - |
| BPC006_RS20115 () | 537222..538916 | + | 1695 | WP_014919797.1 | terminase large subunit | - |
| BPC006_RS39895 () | 538913..539074 | + | 162 | WP_014919798.1 | hypothetical protein | - |
| BPC006_RS20120 () | 539074..540717 | + | 1644 | WP_014919799.1 | phage portal protein | - |
| BPC006_RS20125 () | 540714..541664 | + | 951 | WP_014919800.1 | S49 family peptidase | - |
| BPC006_RS20130 () | 541764..543068 | + | 1305 | WP_014919801.1 | phage major capsid protein | - |
| BPC006_RS20135 () | 543070..543576 | + | 507 | WP_148281738.1 | hypothetical protein | - |
| BPC006_RS20140 () | 543645..544502 | + | 858 | WP_014919803.1 | phage head-tail connector protein | - |
| BPC006_RS20145 () | 544513..544869 | + | 357 | WP_014919804.1 | phage head closure protein | - |
| BPC006_RS20150 () | 544910..545452 | + | 543 | WP_041279437.1 | hypothetical protein | - |
| BPC006_RS20155 () | 545460..545810 | + | 351 | WP_014919806.1 | DUF3168 domain-containing protein | - |
| BPC006_RS20160 () | 545880..546512 | + | 633 | WP_014919807.1 | hypothetical protein | - |
| BPC006_RS20165 () | 546523..546945 | + | 423 | WP_014919808.1 | hypothetical protein | - |
| BPC006_RS30775 () | 547011..547238 | + | 228 | WP_148281748.1 | hypothetical protein | - |
| BPC006_RS20175 () | 547240..550005 | + | 2766 | WP_014919810.1 | phage tail length tape measure family protein | - |
| BPC006_RS20180 () | 550002..550628 | + | 627 | WP_014919811.1 | DUF2460 domain-containing protein | - |
| BPC006_RS20185 () | 550688..551779 | + | 1092 | WP_014919812.1 | DUF2163 domain-containing protein | - |
| BPC006_RS20190 () | 551780..552193 | + | 414 | WP_014919813.1 | C40 family peptidase | - |
| BPC006_RS20195 () | 552193..555369 | + | 3177 | WP_041279439.1 | phage tail protein | - |
| BPC006_RS20200 () | 555374..556081 | + | 708 | WP_014919815.1 | hypothetical protein | - |
| BPC006_RS39900 () | 556179..556472 | - | 294 | WP_187293714.1 | hypothetical protein | - |
| BPC006_RS20210 () | 556499..557527 | + | 1029 | WP_148281739.1 | hypothetical protein | - |
| BPC006_RS20215 () | 557534..558277 | + | 744 | WP_014919818.1 | hypothetical protein | - |
| BPC006_RS20220 () | 558281..558673 | + | 393 | WP_014919819.1 | hypothetical protein | - |
| BPC006_RS20225 () | 558682..559194 | + | 513 | WP_014919820.1 | N-acetylmuramidase | - |
| BPC006_RS20230 () | 559196..559837 | + | 642 | WP_014919821.1 | hypothetical protein | - |
| BPC006_RS20235 () | 560066..560281 | + | 216 | WP_014919822.1 | hypothetical protein | - |
| BPC006_RS39905 () | 560333..560497 | - | 165 | WP_187293715.1 | hypothetical protein | - |
| BPC006_RS20240 () | 560494..560688 | - | 195 | WP_041279445.1 | helix-turn-helix domain-containing protein | - |
| BPC006_RS20245 () | 560693..560953 | - | 261 | WP_148281740.1 | hypothetical protein | - |
| BPC006_RS35165 () | 561727..562251 | + | 525 | WP_101662979.1 | ImmA/IrrE family metallo-endopeptidase | - |
| BPC006_RS39080 () | 562351..564558 | + | 2208 | WP_014919825.1 | hypothetical protein | - |
| BPC006_RS20260 () | 564625..565221 | - | 597 | WP_009962037.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| BPC006_RS20265 () | 565532..567853 | + | 2322 | WP_038712179.1 | DEAD/DEAH box helicase family protein | - |
| BPC006_RS20270 () | 567872..569341 | + | 1470 | WP_009962034.1 | type I restriction-modification system subunit M | - |
| BPC006_RS35170 () | 569338..570135 | + | 798 | WP_076804592.1 | restriction endonuclease subunit S | - |
| BPC006_RS20275 () | 570223..571317 | + | 1095 | WP_009961431.1 | IS5 family transposase ISButh6 | Transposase |
| BPC006_RS20280 () | 571514..572452 | + | 939 | WP_148281741.1 | restriction endonuclease subunit S | - |
| BPC006_RS39085 () | 572562..573056 | + | 495 | WP_139341958.1 | hypothetical protein | - |
| BPC006_RS20285 () | 573121..574245 | - | 1125 | WP_076805049.1 | beta family protein | - |
| BPC006_RS39090 () | 574242..575282 | - | 1041 | WP_197970191.1 | ImmA/IrrE family metallo-endopeptidase | - |
| BPC006_RS20295 () | 575498..575782 | - | 285 | WP_009961460.1 | type II toxin-antitoxin system HigB family toxin | - |
| BPC006_RS39910 () | 576686..576928 | - | 243 | WP_009961458.1 | hypothetical protein | - |
| BPC006_RS39915 () | 576976..577134 | - | 159 | WP_004549802.1 | hypothetical protein | - |
| BPC006_RS20305 () | 577131..577373 | - | 243 | WP_004545584.1 | hypothetical protein | - |
| BPC006_RS20315 () | 577511..577642 | - | 132 | WP_009923452.1 | bacteriophage protein Gp48 | - |
| BPC006_RS20320 () | 577652..577927 | - | 276 | WP_025988352.1 | hypothetical protein | - |
| BPC006_RS20330 () | 578498..578767 | + | 270 | WP_004549731.1 | BrnT family toxin | Toxin Detail |
| BPC006_RS20335 () | 578751..579035 | + | 285 | WP_004525420.1 | BrnA antitoxin family protein | Antitoxin Detail |
| BPC006_RS20345 () | 579682..580065 | + | 384 | Protein_506 | IS3 family transposase ISBps2 | Transposase |
| BPC006_RS35185 () | 580028..580456 | + | 429 | Protein_507 | IS110 family transposase | - |
| BPC006_RS20350 () | 580683..580799 | - | 117 | Protein_508 | IS3 family transposase ISBcen15 | Transposase |
| BPC006_RS20355 () | 581046..582506 | + | 1461 | WP_011326543.1 | metallophosphoesterase | - |
| BPC006_RS20360 () | 582665..583927 | + | 1263 | WP_004537187.1 | c-type cytochrome | - |
| BPC006_RS20365 () | 584084..585016 | + | 933 | WP_004553178.1 | glycerophosphoryl diester phosphodiesterase | - |
| BPC006_RS39920 () | 585214..585406 | + | 193 | Protein_512 | IS21 family transposase | - |
| BPC006_RS20375 () | 585468..586148 | + | 681 | Protein_513 | IS3 family transposase | - |
| BPC006_RS20380 () | 586180..586914 | - | 735 | WP_004525427.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|