MGE detailed information
MGE type: Genomic_island MGE length: 18722 bp
Accession: NC_017906 Location: 5314555..5333276 Organism: Escherichia coli Xuzhou21 Replicon: chromosome
Accession: NC_017906 Location: 5314555..5333276 Organism: Escherichia coli Xuzhou21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDCO157_RS27110 () | 5309688..5310866 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| CDCO157_RS27115 () | 5310934..5311776 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| CDCO157_RS27120 () | 5312042..5314243 | - | 2202 | WP_000535071.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| CDCO157_RS27125 () | 5314555..5314821 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| CDCO157_RS27130 () | 5314818..5315585 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| CDCO157_RS27135 () | 5315595..5316746 | - | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| CDCO157_RS27140 () | 5316862..5318133 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| CDCO157_RS27145 () | 5318174..5319406 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| CDCO157_RS27150 () | 5319873..5320625 | + | 753 | Protein_5087 | hypothetical protein | VF |
| CDCO157_RS32890 () | 5320630..5320830 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| CDCO157_RS27160 () | 5321073..5322485 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| CDCO157_RS27165 () | 5322662..5322826 | + | 165 | WP_000394269.1 | DUF1127 domain-containing protein | - |
| CDCO157_RS27170 () | 5322923..5323804 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| CDCO157_RS30665 () | 5323852..5325015 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| CDCO157_RS27180 () | 5325062..5325403 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 5325398..5325474 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| - () | 5325398..5325474 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| - () | 5325398..5325474 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| - () | 5325398..5325474 | + | 77 | NuclAT_13 | - | Antitoxin Detail |
| - () | 5325398..5325474 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5325398..5325474 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5325398..5325474 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5325398..5325474 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| CDCO157_RS27185 () | 5325624..5327378 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| CDCO157_RS27190 () | 5327378..5328847 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| CDCO157_RS27195 () | 5328914..5331346 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| CDCO157_RS27200 () | 5331624..5333276 | + | 1653 | WP_014714128.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| CDCO157_RS27205 () | 5333345..5334301 | - | 957 | WP_001297640.1 | GTPase | - |
| CDCO157_RS27210 () | 5334312..5334515 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| CDCO157_RS27215 () | 5334565..5336715 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| CDCO157_RS27225 () | 5337008..5337550 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |