MGE detailed information
MGE type: Genomic_island MGE length: 10154 bp
Accession: NC_017906 Location: 3934143..3944296 Organism: Escherichia coli Xuzhou21 Replicon: chromosome
Accession: NC_017906 Location: 3934143..3944296 Organism: Escherichia coli Xuzhou21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDCO157_RS20295 () | 3929341..3930549 | - | 1209 | WP_001301837.1 | propionate kinase | - |
| CDCO157_RS20300 () | 3930575..3931906 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| CDCO157_RS20305 () | 3931928..3932917 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| CDCO157_RS20310 () | 3933016..3933954 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| CDCO157_RS32960 () | 3934269..3934487 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| CDCO157_RS20320 () | 3934743..3935282 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| CDCO157_RS20325 () | 3935304..3936491 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| CDCO157_RS20330 () | 3937120..3938265 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| CDCO157_RS20335 () | 3938362..3939252 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| CDCO157_RS20340 () | 3939282..3940052 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| CDCO157_RS20345 () | 3940068..3941402 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| CDCO157_RS20350 () | 3941777..3943348 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| CDCO157_RS20355 () | 3943497..3943832 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| CDCO157_RS20360 () | 3943832..3944296 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| CDCO157_RS20365 () | 3944351..3945160 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| CDCO157_RS20370 () | 3945409..3946689 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| CDCO157_RS20375 () | 3946712..3947185 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| CDCO157_RS20380 () | 3947196..3947975 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| CDCO157_RS20385 () | 3947965..3948843 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| CDCO157_RS20390 () | 3948861..3949295 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0 |