MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 138732 bp
Accession: NC_017856 Location: 1463232..1601963 Organism: Methylophaga frappieri Replicon: chromosome
Accession: NC_017856 Location: 1463232..1601963 Organism: Methylophaga frappieri Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q7C_RS06920 () | 1459405..1459713 | - | 309 | WP_041366999.1 | DUF485 domain-containing protein | - |
| Q7C_RS06925 () | 1459958..1461076 | + | 1119 | WP_014704014.1 | response regulator | - |
| Q7C_RS06930 () | 1461089..1463656 | + | 2568 | WP_151194734.1 | response regulator | - |
| Q7C_RS06935 () | 1463636..1464514 | - | 879 | WP_014704016.1 | crotonase/enoyl-CoA hydratase family protein | - |
| Q7C_RS06940 () | 1464667..1465659 | - | 993 | WP_014704017.1 | histone deacetylase | - |
| Q7C_RS06945 () | 1465695..1468220 | - | 2526 | WP_014704018.1 | EAL domain-containing protein | - |
| Q7C_RS06950 () | 1468337..1469248 | + | 912 | WP_014704019.1 | TIGR01777 family oxidoreductase | - |
| Q7C_RS06955 () | 1469258..1470271 | + | 1014 | WP_014704020.1 | ferrochelatase | - |
| Q7C_RS06960 () | 1470273..1470761 | - | 489 | WP_014704021.1 | hypothetical protein | VF |
| Q7C_RS06965 () | 1470776..1471078 | - | 303 | WP_014704022.1 | hypothetical protein | VF |
| Q7C_RS06970 () | 1471147..1471851 | - | 705 | WP_014704023.1 | hypothetical protein | VF |
| Q7C_RS06975 () | 1471985..1473112 | - | 1128 | WP_014704024.1 | DUF4340 domain-containing protein | - |
| Q7C_RS06980 () | 1473119..1475047 | - | 1929 | WP_014704025.1 | Gldg family protein | - |
| Q7C_RS06985 () | 1475058..1475798 | - | 741 | WP_014704026.1 | ABC transporter permease | - |
| Q7C_RS06990 () | 1475798..1476745 | - | 948 | WP_014704027.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| Q7C_RS06995 () | 1476944..1477993 | + | 1050 | WP_014704028.1 | DUF2333 family protein | - |
| Q7C_RS07000 () | 1478068..1479144 | + | 1077 | WP_014704029.1 | helix-turn-helix transcriptional regulator | - |
| Q7C_RS07005 () | 1479160..1479639 | - | 480 | WP_014704030.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| Q7C_RS07010 () | 1479683..1479910 | + | 228 | WP_014704031.1 | MoaD/ThiS family protein | - |
| Q7C_RS07015 () | 1479912..1480346 | + | 435 | WP_014704032.1 | molybdenum cofactor biosynthesis protein MoaE | - |
| Q7C_RS07020 () | 1480620..1481111 | + | 492 | WP_014704033.1 | formate dehydrogenase subunit gamma | - |
| Q7C_RS07025 () | 1481111..1482658 | + | 1548 | WP_014704034.1 | formate dehydrogenase beta subunit | - |
| Q7C_RS07030 () | 1482662..1485532 | + | 2871 | WP_014704035.1 | formate dehydrogenase subunit alpha | - |
| Q7C_RS07035 () | 1485544..1486347 | + | 804 | WP_151194808.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| Q7C_RS07040 () | 1486402..1486602 | + | 201 | WP_151194809.1 | formate dehydrogenase subunit delta | - |
| Q7C_RS07045 () | 1486681..1488411 | + | 1731 | WP_014704038.1 | OFA family MFS transporter | - |
| Q7C_RS07050 () | 1488448..1489920 | - | 1473 | WP_014704039.1 | 4-hydroxy-3-polyprenylbenzoate decarboxylase | - |
| Q7C_RS07055 () | 1489927..1490908 | - | 982 | Protein_1396 | IS91 family transposase ISSod25 | Transposase |
| Q7C_RS07060 () | 1491101..1491412 | + | 312 | WP_014704041.1 | hypothetical protein | - |
| Q7C_RS07065 () | 1491668..1492573 | + | 906 | WP_014704042.1 | hypothetical protein | - |
| Q7C_RS07070 () | 1492655..1493473 | + | 819 | WP_014704043.1 | hypothetical protein | - |
| Q7C_RS07075 () | 1493592..1494266 | + | 675 | WP_014704044.1 | hypothetical protein | - |
| Q7C_RS07080 () | 1494357..1495154 | + | 798 | WP_014704045.1 | hypothetical protein | - |
| Q7C_RS07085 () | 1495244..1495534 | - | 291 | WP_041366648.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Q7C_RS07090 () | 1495527..1495748 | - | 222 | WP_014704047.1 | hypothetical protein | - |
| Q7C_RS07095 () | 1495950..1496603 | + | 654 | WP_014704049.1 | hypothetical protein | - |
| Q7C_RS07100 () | 1496703..1497425 | + | 723 | WP_014704051.1 | hypothetical protein | - |
| Q7C_RS07105 () | 1497535..1498335 | + | 801 | WP_014704052.1 | hypothetical protein | VF |
| Q7C_RS07110 () | 1498532..1499089 | + | 558 | WP_041366649.1 | hypothetical protein | - |
| Q7C_RS07115 () | 1499073..1499636 | + | 564 | WP_041366650.1 | hypothetical protein | - |
| Q7C_RS07120 () | 1499742..1500143 | + | 402 | WP_041366651.1 | hypothetical protein | - |
| Q7C_RS07125 () | 1500317..1500853 | + | 537 | WP_014704054.1 | hypothetical protein | - |
| Q7C_RS07130 () | 1500947..1501147 | - | 201 | WP_151194735.1 | hypothetical protein | - |
| Q7C_RS07135 () | 1501167..1502381 | + | 1215 | WP_014704056.1 | chromate efflux transporter | - |
| Q7C_RS13510 () | 1502474..1502659 | + | 186 | WP_083839452.1 | SEC-C domain-containing protein | - |
| Q7C_RS07140 () | 1502746..1503111 | + | 366 | WP_041367002.1 | MmcQ/YjbR family DNA-binding protein | - |
| Q7C_RS07145 () | 1503245..1504291 | + | 1047 | WP_014704059.1 | DUF2235 domain-containing protein | - |
| Q7C_RS07150 () | 1504308..1504946 | - | 639 | WP_014704060.1 | hypothetical protein | VF |
| Q7C_RS07155 () | 1504959..1505165 | - | 207 | WP_014704061.1 | hypothetical protein | VF |
| Q7C_RS07160 () | 1505162..1505539 | - | 378 | WP_014704062.1 | hypothetical protein | - |
| Q7C_RS07165 () | 1505735..1506028 | + | 294 | WP_014704063.1 | hypothetical protein | - |
| Q7C_RS07170 () | 1506136..1506654 | + | 519 | WP_151194736.1 | hypothetical protein | - |
| Q7C_RS07175 () | 1506712..1507125 | + | 414 | WP_014704065.1 | nucleoside diphosphate kinase regulator | - |
| Q7C_RS07180 () | 1507226..1507492 | + | 267 | WP_014704066.1 | DksA/TraR family C4-type zinc finger protein | - |
| Q7C_RS07185 () | 1507550..1509589 | - | 2040 | WP_014704067.1 | oligopeptidase A | - |
| Q7C_RS07190 () | 1509722..1510516 | + | 795 | WP_014704068.1 | UDP-2,3-diacylglucosamine diphosphatase | - |
| Q7C_RS07195 () | 1510516..1511550 | + | 1035 | WP_014704069.1 | glycosyltransferase family 1 protein | - |
| Q7C_RS07200 () | 1511688..1512416 | + | 729 | WP_014704071.1 | VacJ family lipoprotein | - |
| Q7C_RS07205 () | 1512558..1513535 | + | 978 | WP_014704072.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| Q7C_RS07210 () | 1513549..1514070 | + | 522 | WP_014704073.1 | 3-deoxy-manno-octulosonate-8-phosphatase KdsC | - |
| Q7C_RS07215 () | 1513958..1514635 | + | 678 | WP_151194810.1 | LPS export ABC transporter periplasmic protein LptC | - |
| Q7C_RS07220 () | 1514616..1515404 | + | 789 | WP_014704075.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| Q7C_RS07225 () | 1515410..1516135 | + | 726 | WP_014704076.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| Q7C_RS07230 () | 1516187..1518871 | + | 2685 | WP_014704077.1 | ABC transporter substrate-binding protein | - |
| Q7C_RS07235 () | 1518881..1520332 | - | 1452 | WP_014704078.1 | exodeoxyribonuclease VII large subunit | - |
| Q7C_RS07240 () | 1520395..1521858 | + | 1464 | WP_014704079.1 | IMP dehydrogenase | - |
| Q7C_RS07245 () | 1521907..1523484 | + | 1578 | WP_014704080.1 | glutamine-hydrolyzing GMP synthase | - |
| Q7C_RS07255 () | 1523793..1524989 | + | 1197 | WP_014704082.1 | Prophage integrase IntA ; Integrase | Integrase |
| Q7C_RS07260 () | 1524973..1525221 | - | 249 | WP_041366655.1 | AlpA family phage regulatory protein | - |
| Q7C_RS07265 () | 1525465..1526139 | - | 675 | WP_014704084.1 | S24 family peptidase | - |
| Q7C_RS07270 () | 1526235..1526522 | + | 288 | WP_202946494.1 | hypothetical protein | - |
| Q7C_RS07275 () | 1526512..1528029 | + | 1518 | WP_041366656.1 | ParB N-terminal domain-containing protein | - |
| Q7C_RS07280 () | 1528067..1528618 | + | 552 | WP_202946495.1 | DUF2857 domain-containing protein | - |
| Q7C_RS07285 () | 1528578..1529864 | + | 1287 | WP_014704088.1 | helix-turn-helix domain-containing protein | - |
| Q7C_RS07290 () | 1530052..1530792 | + | 741 | WP_014704089.1 | TIGR03761 family integrating conjugative element protein | - |
| Q7C_RS07295 () | 1531226..1532332 | + | 1107 | WP_014704090.1 | ParM/StbA family protein | - |
| Q7C_RS07300 () | 1532522..1532950 | + | 429 | WP_014704091.1 | DUF3577 domain-containing protein | - |
| Q7C_RS07305 () | 1533055..1533570 | + | 516 | WP_014704092.1 | DNA repair protein RadC | - |
| Q7C_RS07310 () | 1533664..1534089 | + | 426 | WP_014704093.1 | hypothetical protein | - |
| Q7C_RS07315 () | 1534931..1535797 | + | 867 | WP_014704094.1 | integrase domain-containing protein | - |
| Q7C_RS07320 () | 1536026..1536406 | + | 381 | WP_202946496.1 | hypothetical protein | VF |
| Q7C_RS07325 () | 1536406..1536633 | + | 228 | WP_014704096.1 | hypothetical protein | - |
| Q7C_RS07330 () | 1536623..1537441 | + | 819 | WP_014704097.1 | TIGR03759 family integrating conjugative element protein | - |
| Q7C_RS07335 () | 1537490..1538014 | + | 525 | WP_202946497.1 | hypothetical protein | VF |
| Q7C_RS07340 () | 1538001..1538570 | + | 570 | WP_202946498.1 | integrating conjugative element protein | - |
| Q7C_RS07345 () | 1538567..1540696 | + | 2130 | WP_187287361.1 | type IV conjugative transfer system coupling protein TraD | - |
| Q7C_RS07350 () | 1540756..1541430 | + | 675 | WP_202946499.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| Q7C_RS07355 () | 1541529..1541930 | + | 402 | WP_014704102.1 | MbcA/ParS/Xre antitoxin family protein | - |
| Q7C_RS07360 () | 1541927..1542619 | + | 693 | WP_014704103.1 | RES family NAD+ phosphorylase | - |
| Q7C_RS07365 () | 1542625..1543215 | + | 591 | WP_014704104.1 | 3'-5' exonuclease | - |
| Q7C_RS07370 () | 1543310..1544656 | + | 1347 | WP_014704105.1 | RNA-directed DNA polymerase | - |
| Q7C_RS07375 () | 1544649..1546718 | + | 2070 | WP_014704106.1 | RNA-directed DNA polymerase | - |
| Q7C_RS07380 () | 1547050..1547352 | + | 303 | WP_014704107.1 | RAQPRD family integrative conjugative element protein | - |
| Q7C_RS07385 () | 1547361..1547591 | + | 231 | WP_014704108.1 | TIGR03758 family integrating conjugative element protein | - |
| Q7C_RS07390 () | 1547703..1548080 | + | 378 | WP_014704109.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| Q7C_RS07395 () | 1548119..1548499 | + | 381 | WP_014704110.1 | TIGR03750 family conjugal transfer protein | - |
| Q7C_RS07400 () | 1548471..1549148 | + | 678 | WP_014704111.1 | TIGR03746 family integrating conjugative element protein | - |
| Q7C_RS07405 () | 1549145..1549966 | + | 822 | WP_014704112.1 | TIGR03749 family integrating conjugative element protein | - |
| Q7C_RS07410 () | 1549999..1551420 | + | 1422 | WP_014704113.1 | TIGR03752 family integrating conjugative element protein | - |
| Q7C_RS07415 () | 1551365..1551823 | + | 459 | WP_151194740.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| Q7C_RS07420 () | 1551833..1554556 | + | 2724 | WP_014704115.1 | conjugative transfer ATPase | - |
| Q7C_RS07425 () | 1554571..1555398 | - | 828 | WP_014704116.1 | NERD domain-containing protein | - |
| Q7C_RS07430 () | 1555627..1555998 | + | 372 | WP_202946500.1 | TIGR03757 family integrating conjugative element protein | - |
| Q7C_RS07435 () | 1555998..1557020 | + | 1023 | WP_202946529.1 | TIGR03756 family integrating conjugative element protein | - |
| Q7C_RS07440 () | 1557017..1558357 | + | 1341 | WP_014704119.1 | integrating conjugative element protein | - |
| Q7C_RS07445 () | 1558398..1558715 | + | 318 | WP_014704120.1 | hypothetical protein | - |
| Q7C_RS07450 () | 1558732..1560297 | + | 1566 | WP_014704121.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| Q7C_RS07455 () | 1560294..1560524 | - | 231 | WP_014704122.1 | hypothetical protein | - |
| Q7C_RS07460 () | 1560521..1560691 | - | 171 | WP_014704123.1 | hypothetical protein | - |
| Q7C_RS07465 () | 1560827..1562347 | - | 1521 | WP_014704124.1 | hypothetical protein | - |
| Q7C_RS07475 () | 1562794..1563093 | + | 300 | WP_014704127.1 | hypothetical protein | - |
| Q7C_RS07480 () | 1563206..1565020 | - | 1815 | WP_041366662.1 | hypothetical protein | - |
| Q7C_RS07485 () | 1565044..1565265 | - | 222 | WP_014704129.1 | hypothetical protein | - |
| Q7C_RS07490 () | 1565366..1566700 | - | 1335 | WP_014704130.1 | HAMP domain-containing protein | - |
| Q7C_RS07495 () | 1566763..1567461 | - | 699 | WP_014704131.1 | hypothetical protein | - |
| Q7C_RS07500 () | 1567652..1568428 | + | 777 | WP_202946501.1 | Transcriptional regulatory protein CreB | VF |
| Q7C_RS07505 () | 1568443..1569222 | + | 780 | WP_014704133.1 | hypothetical protein | - |
| Q7C_RS13780 () | 1569243..1570451 | + | 1209 | WP_014704134.1 | hypothetical protein | - |
| Q7C_RS07515 () | 1570453..1571229 | + | 777 | WP_014704135.1 | metallophosphoesterase | - |
| Q7C_RS07520 () | 1571280..1573742 | + | 2463 | WP_014704136.1 | PDZ domain-containing protein | - |
| Q7C_RS13320 () | 1573889..1574845 | + | 957 | WP_014704138.1 | Secretory immunoglobulin A-binding protein EsiB | VF |
| Q7C_RS07530 () | 1574852..1575712 | - | 861 | WP_014704139.1 | hypothetical protein | - |
| Q7C_RS07535 () | 1576016..1576321 | - | 306 | WP_151194743.1 | hypothetical protein | - |
| Q7C_RS07540 () | 1576862..1578403 | + | 1542 | WP_202946502.1 | hypothetical protein | - |
| Q7C_RS07545 () | 1578589..1580058 | + | 1470 | WP_014704142.1 | hypothetical protein | - |
| Q7C_RS07550 () | 1580207..1581202 | + | 996 | WP_014704143.1 | hypothetical protein | - |
| Q7C_RS07555 () | 1581612..1581956 | - | 345 | WP_014704144.1 | hypothetical protein | - |
| Q7C_RS07560 () | 1581970..1583403 | - | 1434 | WP_014704145.1 | hypothetical protein | - |
| Q7C_RS07565 () | 1583413..1583643 | - | 231 | WP_014704146.1 | hypothetical protein | - |
| Q7C_RS07570 () | 1583888..1586107 | - | 2220 | WP_014704147.1 | hypothetical protein | - |
| Q7C_RS07575 () | 1587232..1588719 | - | 1488 | WP_014704148.1 | peptidoglycan-binding protein | - |
| Q7C_RS07580 () | 1589108..1590280 | + | 1173 | WP_151194744.1 | hypothetical protein | - |
| Q7C_RS07585 () | 1590301..1591191 | + | 891 | WP_014704150.1 | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | VF |
| Q7C_RS07590 () | 1591433..1592902 | + | 1470 | WP_151194745.1 | hypothetical protein | - |
| Q7C_RS07600 () | 1593372..1593743 | - | 372 | WP_014704153.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| Q7C_RS07605 () | 1593740..1593982 | - | 243 | WP_187287362.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| Q7C_RS07615 () | 1594455..1595405 | + | 951 | WP_041366665.1 | hypothetical protein | VF |
| Q7C_RS07620 () | 1595438..1597738 | + | 2301 | WP_014704157.1 | EAL domain-containing protein | - |
| Q7C_RS07625 () | 1597828..1598256 | + | 429 | WP_014704158.1 | hypothetical protein | - |
| Q7C_RS07630 () | 1598305..1599060 | + | 756 | WP_014704159.1 | molybdate ABC transporter substrate-binding protein | - |
| Q7C_RS07635 () | 1599047..1599724 | + | 678 | WP_014704160.1 | molybdate ABC transporter permease subunit | - |
| Q7C_RS07640 () | 1599721..1600785 | + | 1065 | WP_014704161.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| Q7C_RS13325 () | 1600800..1601303 | - | 504 | WP_014704162.1 | histidine phosphatase family protein | - |
| Q7C_RS07650 () | 1601355..1602815 | - | 1461 | WP_014704163.1 | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | - |
| Q7C_RS07655 () | 1602812..1603768 | - | 957 | WP_014704164.1 | nucleotidyltransferase domain-containing protein | - |
| Q7C_RS07660 () | 1603803..1604570 | - | 768 | WP_151194746.1 | peptidase | - |
| Q7C_RS07665 () | 1604842..1605069 | - | 228 | WP_014704166.1 | hypothetical protein | - |
| Q7C_RS07670 () | 1605080..1605337 | - | 258 | WP_041366666.1 | hypothetical protein | - |
| Q7C_RS07675 () | 1605340..1605525 | - | 186 | WP_014704168.1 | hypothetical protein | - |
| Q7C_RS07680 () | 1605639..1606154 | - | 516 | WP_014704169.1 | Slp family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|