MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 99355 bp
Accession: NC_017671 Location: 1645653..1745007 Organism: Stenotrophomonas maltophilia D457 Replicon: chromosome
Accession: NC_017671 Location: 1645653..1745007 Organism: Stenotrophomonas maltophilia D457 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMD_RS07680 () | 1640960..1641448 | + | 489 | WP_014646609.1 | low molecular weight phosphotyrosine protein phosphatase | - |
| SMD_RS07685 () | 1641445..1642857 | + | 1413 | WP_014646610.1 | hypothetical protein | - |
| SMD_RS07690 () | 1642854..1644698 | + | 1845 | WP_014646611.1 | excinuclease ABC subunit UvrC | - |
| SMD_RS07695 () | 1644717..1645343 | + | 627 | WP_012510614.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| SMD_RS07705 () | 1646032..1647531 | + | 1500 | WP_014645495.1 | IS21 family transposase ISPa36 | Transposase |
| SMD_RS07710 () | 1647518..1648309 | + | 792 | WP_014646612.1 | IS21 family transposase ISPa36 | Transposase |
| SMD_RS07715 () | 1648522..1649829 | - | 1308 | WP_003097539.1 | TolC family protein | - |
| SMD_RS22290 () | 1650036..1650828 | + | 793 | WP_086009121.1 | IS5 family transposase ISStma16 | Transposase |
| SMD_RS07730 () | 1651244..1651519 | + | 276 | WP_003116793.1 | hypothetical protein | - |
| SMD_RS07750 () | 1652806..1654037 | + | 1232 | WP_087948675.1 | IS3 family transposase ISStma17 | Transposase |
| SMD_RS22305 () | 1654360..1654665 | + | 306 | WP_003097526.1 | helix-turn-helix domain-containing protein | - |
| SMD_RS07760 () | 1654670..1655560 | - | 891 | WP_014833982.1 | LysR family transcriptional regulator | - |
| SMD_RS07765 () | 1655792..1656076 | - | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| SMD_RS07770 () | 1656205..1657131 | - | 927 | WP_003116797.1 | copper homeostasis membrane protein CopD | - |
| SMD_RS07775 () | 1657136..1657522 | - | 387 | WP_003090319.1 | copper homeostasis periplasmic binding protein CopC | - |
| SMD_RS07780 () | 1657664..1660144 | - | 2481 | WP_071534985.1 | heavy metal translocating P-type ATPase | - |
| SMD_RS07785 () | 1660258..1660467 | - | 210 | WP_020924930.1 | DUF2933 domain-containing protein | - |
| SMD_RS07790 () | 1660564..1661049 | - | 486 | WP_014646619.1 | DUF411 domain-containing protein | - |
| SMD_RS07795 () | 1661087..1662067 | - | 981 | WP_005408883.1 | copper resistance protein B | - |
| SMD_RS07800 () | 1662093..1663994 | - | 1902 | WP_003097515.1 | copper resistance system multicopper oxidase | - |
| SMD_RS07805 () | 1664249..1664941 | + | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| SMD_RS07810 () | 1664913..1666349 | + | 1437 | WP_003097498.1 | Sensor kinase CusS | VF |
| SMD_RS07815 () | 1667297..1667626 | + | 330 | WP_003116799.1 | helix-turn-helix domain-containing protein | - |
| SMD_RS07820 () | 1667640..1668110 | + | 471 | WP_003107243.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| SMD_RS07825 () | 1668123..1668620 | + | 498 | WP_003107241.1 | arsenate reductase ArsC | - |
| SMD_RS07830 () | 1668631..1669716 | + | 1086 | WP_003109696.1 | ACR3 family arsenite efflux transporter | - |
| SMD_RS07835 () | 1669731..1670153 | + | 423 | WP_003107236.1 | arsenate reductase (glutaredoxin) | - |
| SMD_RS07840 () | 1670252..1670554 | + | 303 | WP_003107234.1 | PadR family transcriptional regulator | - |
| SMD_RS07845 () | 1670551..1671780 | + | 1230 | WP_003107233.1 | chromate efflux transporter | - |
| SMD_RS07850 () | 1671786..1672316 | + | 531 | WP_003107230.1 | N-acetyltransferase | - |
| SMD_RS07855 () | 1672524..1673987 | - | 1464 | Protein_1514 | chromosome partitioning protein ParB | - |
| SMD_RS07860 () | 1674270..1674715 | - | 446 | Protein_1515 | Efflux pump membrane transporter BepE | VF |
| SMD_RS07865 () | 1674808..1676004 | - | 1197 | Protein_1516 | Efflux pump periplasmic linker BepF | VF |
| SMD_RS07870 () | 1676298..1678145 | - | 1848 | WP_003109768.1 | TraI domain-containing protein | - |
| SMD_RS07875 () | 1678461..1679087 | + | 627 | WP_003109769.1 | hypothetical protein | - |
| SMD_RS07880 () | 1679100..1679732 | + | 633 | WP_003090219.1 | RES family NAD+ phosphorylase | - |
| SMD_RS07885 () | 1679817..1680182 | + | 366 | WP_003090216.1 | DUF3742 family protein | - |
| SMD_RS07890 () | 1680194..1681714 | - | 1521 | WP_003090214.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| SMD_RS07895 () | 1681728..1682087 | - | 360 | WP_003090212.1 | hypothetical protein | - |
| SMD_RS07900 () | 1682084..1683478 | - | 1395 | WP_003109770.1 | integrating conjugative element protein | - |
| SMD_RS07905 () | 1683488..1684438 | - | 951 | WP_003090208.1 | TIGR03756 family integrating conjugative element protein | - |
| SMD_RS07910 () | 1684435..1684881 | - | 447 | WP_003109772.1 | TIGR03757 family integrating conjugative element protein | - |
| SMD_RS07915 () | 1685046..1685540 | - | 495 | WP_003090203.1 | DNA repair protein RadC | - |
| SMD_RS07920 () | 1685716..1686483 | - | 768 | WP_003090202.1 | thioredoxin domain-containing protein | - |
| SMD_RS07925 () | 1686508..1689399 | - | 2892 | WP_003105079.1 | conjugative transfer ATPase | - |
| SMD_RS07930 () | 1689399..1689848 | - | 450 | WP_003109775.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| SMD_RS07935 () | 1689829..1691248 | - | 1420 | Protein_1530 | TIGR03752 family integrating conjugative element protein | - |
| SMD_RS07940 () | 1691238..1692149 | - | 912 | WP_003105643.1 | TIGR03749 family integrating conjugative element protein | - |
| SMD_RS07945 () | 1692146..1692838 | - | 693 | WP_003105641.1 | TIGR03746 family integrating conjugative element protein | - |
| SMD_RS07950 () | 1692835..1693233 | - | 399 | WP_003105639.1 | TIGR03750 family conjugal transfer protein | - |
| SMD_RS07955 () | 1693245..1693604 | - | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| SMD_RS07960 () | 1693621..1693854 | - | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| SMD_RS07965 () | 1693851..1694234 | - | 384 | WP_003120001.1 | RAQPRD family integrative conjugative element protein | - |
| SMD_RS07970 () | 1694438..1694908 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SMD_RS07975 () | 1694905..1695480 | + | 576 | WP_003109777.1 | PIN domain-containing protein | Toxin Detail |
| SMD_RS07980 () | 1695498..1696412 | + | 915 | WP_003105629.1 | AAA family ATPase | - |
| SMD_RS07985 () | 1696409..1696879 | + | 471 | WP_003105626.1 | hypothetical protein | - |
| SMD_RS07990 () | 1696876..1697376 | + | 501 | WP_003090159.1 | hypothetical protein | - |
| SMD_RS07995 () | 1697376..1698278 | + | 903 | WP_003105624.1 | nucleotidyltransferase domain-containing protein | - |
| SMD_RS08000 () | 1698317..1699042 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| SMD_RS08005 () | 1699052..1701676 | + | 2625 | WP_003116812.1 | AAA family ATPase | - |
| SMD_RS08010 () | 1701717..1702466 | - | 750 | WP_014646627.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| SMD_RS08015 () | 1702463..1704655 | - | 2193 | WP_003116813.1 | type IV conjugative transfer system coupling protein TraD | - |
| SMD_RS08020 () | 1704660..1705208 | - | 549 | WP_003109779.1 | integrating conjugative element protein | - |
| SMD_RS08025 () | 1705205..1705795 | - | 591 | WP_003109780.1 | hypothetical protein | VF |
| SMD_RS08030 () | 1705777..1706514 | - | 738 | WP_003098886.1 | TIGR03759 family integrating conjugative element protein | - |
| SMD_RS08035 () | 1706527..1707171 | - | 645 | WP_003098888.1 | hypothetical protein | - |
| SMD_RS08040 () | 1707168..1707767 | - | 600 | WP_003098890.1 | hypothetical protein | VF |
| SMD_RS08045 () | 1707906..1710182 | - | 2277 | WP_014646628.1 | DEAD/DEAH box helicase | - |
| SMD_RS08050 () | 1710319..1710624 | - | 306 | WP_003116817.1 | hypothetical protein | - |
| SMD_RS08055 () | 1710714..1711034 | - | 321 | WP_003116818.1 | hypothetical protein | - |
| SMD_RS08060 () | 1711085..1712194 | - | 1110 | WP_003116819.1 | O-methyltransferase | - |
| SMD_RS08065 () | 1712259..1712906 | - | 648 | WP_003116820.1 | hypothetical protein | - |
| SMD_RS08070 () | 1712983..1713243 | - | 261 | WP_003090124.1 | hypothetical protein | - |
| SMD_RS08075 () | 1713260..1713667 | - | 408 | WP_003116821.1 | hypothetical protein | - |
| SMD_RS08080 () | 1713772..1714113 | - | 342 | WP_003116822.1 | hypothetical protein | - |
| SMD_RS08085 () | 1714208..1714897 | - | 690 | WP_003116823.1 | DUF3275 family protein | - |
| SMD_RS08090 () | 1714992..1715819 | - | 828 | WP_003116824.1 | DUF945 domain-containing protein | - |
| SMD_RS08095 () | 1715965..1716870 | - | 906 | WP_003116825.1 | DUF3577 domain-containing protein | - |
| SMD_RS08100 () | 1717181..1717465 | - | 285 | WP_003098923.1 | hypothetical protein | - |
| SMD_RS08105 () | 1717773..1718057 | - | 285 | WP_031629745.1 | DUF3085 domain-containing protein | - |
| SMD_RS22320 () | 1718103..1719094 | - | 992 | Protein_1565 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| SMD_RS08120 () | 1719119..1720807 | - | 1689 | WP_003098932.1 | mercury(II) reductase | - |
| SMD_RS08125 () | 1720818..1721105 | - | 288 | WP_003116826.1 | mercury resistance system periplasmic binding protein MerP | - |
| SMD_RS08130 () | 1721118..1721468 | - | 351 | WP_003116827.1 | mercuric ion transporter MerT | - |
| SMD_RS08135 () | 1721540..1721947 | + | 408 | WP_003098939.1 | Hg(II)-responsive transcriptional regulator | - |
| SMD_RS22325 () | 1721876..1722064 | - | 189 | WP_005408893.1 | hypothetical protein | - |
| SMD_RS08140 () | 1722209..1723033 | - | 825 | WP_003098941.1 | hypothetical protein | - |
| SMD_RS08145 () | 1723322..1723600 | - | 279 | WP_003116828.1 | hypothetical protein | - |
| SMD_RS08150 () | 1723698..1724435 | - | 738 | WP_014646630.1 | hypothetical protein | - |
| SMD_RS08155 () | 1724519..1725205 | - | 687 | WP_003116830.1 | hypothetical protein | - |
| SMD_RS08160 () | 1725388..1725780 | - | 393 | WP_003116832.1 | hypothetical protein | - |
| SMD_RS08165 () | 1725802..1726014 | - | 213 | WP_003116833.1 | hypothetical protein | - |
| SMD_RS08170 () | 1726352..1726663 | - | 312 | WP_003108988.1 | hypothetical protein | - |
| SMD_RS08175 () | 1727000..1727500 | - | 501 | WP_003098955.1 | lipoprotein signal peptidase | - |
| SMD_RS08180 () | 1727504..1730416 | - | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| SMD_RS08185 () | 1730508..1730906 | + | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| SMD_RS23270 () | 1730974..1731336 | - | 363 | WP_196495817.1 | DUF3703 domain-containing protein | - |
| SMD_RS23275 () | 1731361..1731597 | - | 237 | WP_003098970.1 | hypothetical protein | - |
| SMD_RS08195 () | 1731982..1732617 | + | 636 | WP_003098972.1 | cation diffusion facilitator family transporter | - |
| SMD_RS08200 () | 1733341..1735371 | - | 2031 | WP_003116834.1 | DNA topoisomerase III | - |
| SMD_RS08205 () | 1735655..1736095 | - | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| SMD_RS08210 () | 1736169..1736696 | - | 528 | WP_014646631.1 | DUF3158 family protein | - |
| SMD_RS08215 () | 1736693..1737484 | - | 792 | WP_003116836.1 | TIGR03761 family integrating conjugative element protein | - |
| SMD_RS08220 () | 1737914..1739152 | - | 1239 | WP_003116837.1 | hypothetical protein | - |
| SMD_RS08225 () | 1739156..1739716 | - | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| SMD_RS08230 () | 1739731..1741410 | - | 1680 | WP_004350508.1 | ParB family protein | - |
| SMD_RS08235 () | 1741403..1741672 | - | 270 | WP_003050422.1 | hypothetical protein | - |
| SMD_RS08240 () | 1741656..1742531 | - | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| SMD_RS08245 () | 1742574..1742786 | - | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| SMD_RS08250 () | 1742905..1743651 | - | 747 | WP_003098991.1 | hypothetical protein | - |
| SMD_RS08255 () | 1744102..1744602 | + | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| SMD_RS08260 () | 1745147..1746253 | + | 1107 | WP_014646633.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| SMD_RS22335 () | 1746809..1746810 | - | 2 | WP_086009121.1 | IS5-like element ISStma16 family transposase | - |
| SMD_RS08275 () | 1747661..1749124 | + | 1464 | WP_032959318.1 | efflux transporter outer membrane subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|