MGE detailed information
MGE type: Genomic_island MGE length: 9441 bp
Accession: NC_017656 Location: 3805721..3815161 Organism: Escherichia coli O55:H7 str. RM12579 Replicon: chromosome
Accession: NC_017656 Location: 3805721..3815161 Organism: Escherichia coli O55:H7 str. RM12579 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECO55CA74_RS19120 () | 3801553..3802884 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| ECO55CA74_RS19125 () | 3802906..3803895 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| ECO55CA74_RS19130 () | 3803994..3804932 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| ECO55CA74_RS32110 () | 3805247..3805465 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| ECO55CA74_RS19140 () | 3805721..3806260 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| ECO55CA74_RS19145 () | 3806282..3807469 | + | 1188 | WP_000484585.1 | YhaC family protein | - |
| ECO55CA74_RS19150 () | 3807985..3809130 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| ECO55CA74_RS19155 () | 3809227..3810117 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| ECO55CA74_RS19160 () | 3810147..3810917 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| ECO55CA74_RS19165 () | 3810933..3812267 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| ECO55CA74_RS19170 () | 3812642..3814213 | + | 1572 | WP_001273775.1 | galactarate dehydratase | - |
| ECO55CA74_RS19175 () | 3814362..3814697 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| ECO55CA74_RS19180 () | 3814697..3815161 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| ECO55CA74_RS19185 () | 3815216..3816025 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| ECO55CA74_RS19190 () | 3816274..3817554 | + | 1281 | WP_000681946.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| ECO55CA74_RS19195 () | 3817577..3818050 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| ECO55CA74_RS19200 () | 3818061..3818840 | + | 780 | WP_000406210.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| ECO55CA74_RS19205 () | 3818830..3819708 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| ECO55CA74_RS19210 () | 3819726..3820160 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.002 |